메뉴 건너뛰기




Volumn 78, Issue 11-12, 1996, Pages 1035-1042

Differential contributions of two elements of rho-independent terminator to transcription termination and mRNA stabilization

Author keywords

mRNA stability; Poly(T) tract; Rho independent terminator; Stem loop structure; Transcription termination

Indexed keywords

CYCLIC AMP BINDING PROTEIN; MESSENGER RNA; POLYTHYMIDYLIC ACID; RHO FACTOR;

EID: 0030433928     PISSN: 03009084     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0300-9084(97)86727-2     Document Type: Conference Paper
Times cited : (56)

References (30)
  • 1
    • 0025663103 scopus 로고
    • Prediction of rho-independent Escherichia coli transcription terminators: A statistical analysis of their RNA stem-loop structures
    • 1 d'Aubenton Carafa Y, Brody E, Thermes C (1990) Prediction of rho-independent Escherichia coli transcription terminators: A statistical analysis of their RNA stem-loop structures. J Mol Biol 216, 835-858
    • (1990) J Mol Biol , vol.216 , pp. 835-858
    • D'Aubenton Carafa, Y.1    Brody, E.2    Thermes, C.3
  • 2
    • 0001562527 scopus 로고    scopus 로고
    • Transcription attenuation
    • (Neidhardt FC, Curtiss III R, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE, eds) American Society for Microbiology, Washington DC, 2nd edn, 1263 p
    • 2 Landick R, Turnbough CL, Yanofsky, C (1996) Transcription attenuation. In: Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology (Neidhardt FC, Curtiss III R, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE, eds) American Society for Microbiology, Washington DC, 2nd edn, vol 1, 1263 p
    • (1996) Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology , vol.1
    • Landick, R.1    Turnbough, C.L.2    Yanofsky, C.3
  • 3
    • 0019486599 scopus 로고
    • Termination of transcription and its regulation in the tryptophan operon of E coli
    • 3 Platt T (1981) Termination of transcription and its regulation in the tryptophan operon of E coli. Cell 24, 10-23
    • (1981) Cell , vol.24 , pp. 10-23
    • Platt, T.1
  • 4
    • 0023905791 scopus 로고
    • Contributions of RNA secondary structure and length of the thymidine tract to transcription termination at the thr operon attenuator
    • 4 Lynn SP, Kasper LM, Gardner JF (1988) Contributions of RNA secondary structure and length of the thymidine tract to transcription termination at the thr operon attenuator. J Biol. Chem 263, 472-479
    • (1988) J Biol. Chem , vol.263 , pp. 472-479
    • Lynn, S.P.1    Kasper, L.M.2    Gardner, J.F.3
  • 6
    • 0029073396 scopus 로고
    • Transcription termination at intrinsic terminators: The role of the RNA hairpin
    • 6 Wilson KS, von Hippel PH (1995) Transcription termination at intrinsic terminators: The role of the RNA hairpin. Proc Nad Acad Sci USA 92, 8793-8797
    • (1995) Proc Nad Acad Sci USA , vol.92 , pp. 8793-8797
    • Wilson, K.S.1    Von Hippel, P.H.2
  • 7
    • 0028783363 scopus 로고
    • Transcription termination at the thr attenuator: Evidence that the adenine residues upstream of the stem and loop structure are not required for termination
    • 7 Yang M-T, Scott II HB, Gardner JF (1995) Transcription termination at the thr attenuator: Evidence that the adenine residues upstream of the stem and loop structure are not required for termination. J Biol Chem 270, 23330-23336
    • (1995) J Biol Chem , vol.270 , pp. 23330-23336
    • Yang, M.-T.1    Scott H.B. II2    Gardner, J.F.3
  • 8
    • 0022555852 scopus 로고
    • Transcription termination and the regulation of gene expression
    • 8 Platt T (1986) Transcription termination and the regulation of gene expression. Annu Rev Biochem 55, 339-372
    • (1986) Annu Rev Biochem , vol.55 , pp. 339-372
    • Platt, T.1
  • 9
    • 0001323636 scopus 로고
    • Transcription elongation and termination in Escherichia coli
    • (Neidhardt FC, Ingraham SL, Low KB, Magasanik B, Schaechter M, Umbarger HE, eds) American Society for Microbiology, Washington DC, 1241 p
    • 9 Yager TD, von Hippel, PH (1987) Transcription elongation and termination in Escherichia coli. In: Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. (Neidhardt FC, Ingraham SL, Low KB, Magasanik B, Schaechter M, Umbarger HE, eds) American Society for Microbiology, Washington DC, Vol 2, 1241 p
    • (1987) Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology , vol.2
    • Yager, T.D.1    Von Hippel, P.H.2
  • 10
    • 0026566314 scopus 로고
    • Parameters affecting transcription termination by Escherichia coli RNA polymerase: I. Analysis of 13 rho-independent terminators
    • 10 Reynolds R, Bermudez-Cruz RM, Chamberlin MJ (1992) Parameters affecting transcription termination by Escherichia coli RNA polymerase: I. Analysis of 13 rho-independent terminators. J Mol Biol 224, 31-51
    • (1992) J Mol Biol , vol.224 , pp. 31-51
    • Reynolds, R.1    Bermudez-Cruz, R.M.2    Chamberlin, M.J.3
  • 11
    • 0029066765 scopus 로고
    • Coupling between transcription termination and RNA polymerase inchworming
    • 11 Nudler E, Kashlev M, Nikiforov V, Goldfarb A (1995) Coupling between transcription termination and RNA polymerase inchworming. Cell 81, 351-357
    • (1995) Cell , vol.81 , pp. 351-357
    • Nudler, E.1    Kashlev, M.2    Nikiforov, V.3    Goldfarb, A.4
  • 12
    • 0022098923 scopus 로고
    • Maturation of Escherichia coli tryptophan operon mRNAs: Evidence for 3′ exonucleolytic processing after rho-independent termination
    • 12 Mott JE, Galloway JL, Platt T (1985) Maturation of Escherichia coli tryptophan operon mRNAs: Evidence for 3′ exonucleolytic processing after rho-independent termination. EMBO J 4, 1887-1891
    • (1985) EMBO J , vol.4 , pp. 1887-1891
    • Mott, J.E.1    Galloway, J.L.2    Platt, T.3
  • 13
    • 0011170748 scopus 로고
    • Posttranscriptional control of bacteriophage λ int gene expression from a site distal to the gene
    • 13 Guarneros G, Montanez C, Hernandez T, Court D (1982) Posttranscriptional control of bacteriophage λ int gene expression from a site distal to the gene. Proc Natl Acad Sci USA 19, 238-242
    • (1982) Proc Natl Acad Sci USA , vol.19 , pp. 238-242
    • Guarneros, G.1    Montanez, C.2    Hernandez, T.3    Court, D.4
  • 14
    • 0020490340 scopus 로고
    • Molecular cloning and nucleotide sequencing of the gene for E coli cAMP receptor protein
    • 14 Aiba H, Fujimoto S, and Ozaki N (1982) Molecular cloning and nucleotide sequencing of the gene for E coli cAMP receptor protein. Nucleic Acids Res 10, 1345-1361
    • (1982) Nucleic Acids Res , vol.10 , pp. 1345-1361
    • Aiba, H.1    Fujimoto, S.2    Ozaki, N.3
  • 15
    • 0025969258 scopus 로고
    • Transcription terminator is a positive regulatory element in the expression of the Escherichia coli crp gene
    • 15 Aiba H, Hanamura A, Yamano H (1991) Transcription terminator is a positive regulatory element in the expression of the Escherichia coli crp gene. J Biol Chem 266, 1721-1727
    • (1991) J Biol Chem , vol.266 , pp. 1721-1727
    • Aiba, H.1    Hanamura, A.2    Yamano, H.3
  • 16
  • 17
    • 0002666144 scopus 로고
    • Sensitive mutants of bacteriophage λ
    • 17 Campbell A (1961) Sensitive mutants of bacteriophage λ. Virology 14, 22-32
    • (1961) Virology , vol.14 , pp. 22-32
    • Campbell, A.1
  • 18
    • 0018358652 scopus 로고
    • Modulation of two promoters of the galactose operon of Escherichia coli
    • 18 Adhya S, Miller W (1979) Modulation of two promoters of the galactose operon of Escherichia coli. Nature 279, 492-494
    • (1979) Nature , vol.279 , pp. 492-494
    • Adhya, S.1    Miller, W.2
  • 19
    • 0020995669 scopus 로고
    • Regulation of adenylate cyclase synthesis in Escherichia coli: Nucleotide sequence of the control region
    • 19 Roy A, Haziza C, Danchin A (1983) Regulation of adenylate cyclase synthesis in Escherichia coli: nucleotide sequence of the control region. EMBO J 2, 791-797
    • (1983) EMBO J , vol.2 , pp. 791-797
    • Roy, A.1    Haziza, C.2    Danchin, A.3
  • 20
    • 0022349488 scopus 로고
    • Evidence for negative control of cya transcription by cAMP and cAMP receptor protein in intact Escherichia coli cells
    • 20 Mori K, Aiba H (1985) Evidence for negative control of cya transcription by cAMP and cAMP receptor protein in intact Escherichia coli cells. J Biol Chem 260, 14838-14843
    • (1985) J Biol Chem , vol.260 , pp. 14838-14843
    • Mori, K.1    Aiba, H.2
  • 21
    • 0019876473 scopus 로고
    • Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
    • 21 Zuker M, Stiegler P (1981) Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res 9, 133-148
    • (1981) Nucleic Acids Res , vol.9 , pp. 133-148
    • Zuker, M.1    Stiegler, P.2
  • 22
    • 0002404647 scopus 로고
    • The role of the 3′ end in mRNA stability and decay
    • (Belasco J, Brawerman G, eds) Academic Press Inc, New York, 13 p
    • 22 Higgins CF, Causton HC, Dance GSC, Mudd EA (1993) The role of the 3′ end in mRNA stability and decay. In: Control of Messenger RNA Stability (Belasco J, Brawerman G, eds) Academic Press Inc, New York, 13 p
    • (1993) Control of Messenger RNA Stability
    • Higgins, C.F.1    Causton, H.C.2    Dance, G.S.C.3    Mudd, E.A.4
  • 23
    • 0022534386 scopus 로고
    • Identification of a positive retroregulator that stabilizes mRNAs in bacteria
    • 23 Wong HC, Hayashi M (1986) Identification of a positive retroregulator that stabilizes mRNAs in bacteria. Proc Natl Acad Sci USA 83, 3233-3237
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 3233-3237
    • Wong, H.C.1    Hayashi, M.2
  • 24
    • 0022432946 scopus 로고
    • Cloned DNA sequences that determine mRNA stability of bacteriophage ΦX174 in vivo are functional
    • 24 Hayashi MN, Hayashi M (1985) Cloned DNA sequences that determine mRNA stability of bacteriophage ΦX174 in vivo are functional. Nucleic Acids Res 13, 5937-5948
    • (1985) Nucleic Acids Res , vol.13 , pp. 5937-5948
    • Hayashi, M.N.1    Hayashi, M.2
  • 25
    • 0023661240 scopus 로고
    • Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA
    • 25 Tomizawa J, Masukata H (1987) Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA. Cell 51, 623-630
    • (1987) Cell , vol.51 , pp. 623-630
    • Tomizawa, J.1    Masukata, H.2
  • 26
    • 0026544876 scopus 로고
    • Parameters affecting transcription termination by Escherichia coli RNA polymerase: II. Construction and analysis of hybrid terminators
    • 26 Reynolds R, Chamberlin MJ (1992) Parameters affecting transcription termination by Escherichia coli RNA polymerase: II. Construction and analysis of hybrid terminators. J Mol Biol 224, 53-63
    • (1992) J Mol Biol , vol.224 , pp. 53-63
    • Reynolds, R.1    Chamberlin, M.J.2
  • 27
    • 0026708877 scopus 로고
    • Structural analysis of ternary complexes of Escherichia coli RNA polymerase: Individual complexes halted along different transcription units have distinct and unexpected biochemical properties
    • 27 Krummel B, Chamberlin MJ (1992) Structural analysis of ternary complexes of Escherichia coli RNA polymerase: individual complexes halted along different transcription units have distinct and unexpected biochemical properties. J Mol Biol 225, 221-237
    • (1992) J Mol Biol , vol.225 , pp. 221-237
    • Krummel, B.1    Chamberlin, M.J.2
  • 28
    • 0026766857 scopus 로고
    • Structural analysis of ternary complexes of Escherichia coli RNA polymerase: Deoxyribonuclease I foot-printing of defined complexes
    • 28 Krummel B, Chamberlin MJ ( 1992) Structural analysis of ternary complexes of Escherichia coli RNA polymerase: deoxyribonuclease I foot-printing of defined complexes. J Mol Biol 225, 239-250
    • (1992) J Mol Biol , vol.225 , pp. 239-250
    • Krummel, B.1    Chamberlin, M.J.2
  • 29
    • 0028066790 scopus 로고
    • Discontinuous mechanism of transcription elongation
    • 29 Nudler E, Goldfarb A, Kashlev M (1994) Discontinuous mechanism of transcription elongation. Science 265, 793-796
    • (1994) Science , vol.265 , pp. 793-796
    • Nudler, E.1    Goldfarb, A.2    Kashlev, M.3
  • 30
    • 0029029468 scopus 로고
    • Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex
    • 30 Wang D, Meier TI, Chan CL, Feng G, Lee DN, Landick R (1995) Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex. Cell 81, 341-350
    • (1995) Cell , vol.81 , pp. 341-350
    • Wang, D.1    Meier, T.I.2    Chan, C.L.3    Feng, G.4    Lee, D.N.5    Landick, R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.