-
1
-
-
0004253599
-
-
Institute of Statistical Mathematics, Tokyo
-
Adachi, J., and Hasegawa, M. (1992). Computer Science Monographs, No. 27, MOLPHY: Programs for molecular phylogenetics I - PROTML: Maximum likelihood inference of protein phylogeny. Institute of Statistical Mathematics, Tokyo.
-
(1992)
Computer Science Monographs, No. 27, MOLPHY: Programs for Molecular Phylogenetics i - PROTML: Maximum Likelihood Inference of Protein Phylogeny
-
-
Adachi, J.1
Hasegawa, M.2
-
2
-
-
0025183708
-
Basic Local Alignment Search Tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. (1990). Basic Local Alignment Search Tool. J Mol Biol 215:403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0024448652
-
Basic phylogenetic systematization of the Metazoa
-
Fernholm, K.B., Bremer, K., and J̈ornvall, H, (ed.,) Excerpta Medica (Elsevier), Amsterdam
-
Ax, P. (1989). Basic phylogenetic systematization of the Metazoa. In: The Hierarchy of Life, Fernholm, K.B., Bremer, K., and J̈ornvall, H, (ed.,) Excerpta Medica (Elsevier), Amsterdam: p. 229-245.
-
(1989)
The Hierarchy of Life
, pp. 229-245
-
-
Ax, P.1
-
4
-
-
0022904751
-
Conservation of a large protein domain in the segmentation gene paired and in functionally related genes of Drosophila
-
Bopp, D., Burri, M., Baumgartner, S., Frigerio, G., and Noll, M. (1986). Conservation of a large protein domain in the segmentation gene paired and in functionally related genes of Drosophila. Cell 47:1033-1040.
-
(1986)
Cell
, vol.47
, pp. 1033-1040
-
-
Bopp, D.1
Burri, M.2
Baumgartner, S.3
Frigerio, G.4
Noll, M.5
-
5
-
-
0024424064
-
Isolation of two tissue-specific Drosophila paired box genes, Pox meso and Pox neuro
-
Bopp, D., Jamet, E., Baumgartner, S., Burri, M., and Noll, M. (1989). Isolation of two tissue-specific Drosophila paired box genes, Pox meso and Pox neuro. EMBO J 8:3447-3457.
-
(1989)
EMBO J
, vol.8
, pp. 3447-3457
-
-
Bopp, D.1
Jamet, E.2
Baumgartner, S.3
Burri, M.4
Noll, M.5
-
6
-
-
0000071294
-
A comprehensive classification of homeobox genes
-
Duboule, D. ed., New York: Oxford University Press
-
Bürglin, T.R. (1994). A comprehensive classification of homeobox genes. In: Guidebook to the Homeobox Genes, Duboule, D. ed., New York: Oxford University Press, p. 27-71.
-
(1994)
Guidebook to the Homeobox Genes
, pp. 27-71
-
-
Bürglin, T.R.1
-
7
-
-
0026432649
-
Nematode homeobox cluster
-
Bürglin, T.R., Ruvkun, G., Coulson, A., Hawkins, N.C., McGhee, J.D., Schaller, D., Wittman, C., M̈uller, F., and Waterson, R.H. (1991). Nematode homeobox cluster. Nature 351:703.
-
(1991)
Nature
, vol.351
, pp. 703
-
-
Bürglin, T.R.1
Ruvkun, G.2
Coulson, A.3
Hawkins, N.C.4
McGhee, J.D.5
Schaller, D.6
Wittman, C.7
M̈uller, F.8
Waterson, R.H.9
-
8
-
-
0027662096
-
Hox type homeoboxes in the chelicerate Limulus polyphemus
-
Cartwright, P., Dick, M., and Buss, L.W. (1993). Hox type homeoboxes in the chelicerate Limulus polyphemus. Mol Phylogenet Evol 2:185-192.
-
(1993)
Mol Phylogenet Evol
, vol.2
, pp. 185-192
-
-
Cartwright, P.1
Dick, M.2
Buss, L.W.3
-
9
-
-
0025942692
-
The molecular basis of the undulated/Pax-1 mutation
-
Chalepakis, G., Fritsch, R., Fickenscher, H., Deutsch, U., Goulding, M., and Gruss, P. (1991). The molecular basis of the undulated/Pax-1 mutation. Cell 66:873-884.
-
(1991)
Cell
, vol.66
, pp. 873-884
-
-
Chalepakis, G.1
Fritsch, R.2
Fickenscher, H.3
Deutsch, U.4
Goulding, M.5
Gruss, P.6
-
10
-
-
0025978456
-
An analysis of the origin of metazoans, using comparisons of partial sequences of the 28S RNA, reveals an early emergence of triploblasts
-
Christen, R., Ratto, A., Baroin, A., Perasso, R., Grell, K.G, and Adoutte, A. (1991). An analysis of the origin of metazoans, using comparisons of partial sequences of the 28S RNA, reveals an early emergence of triploblasts. EMBO J 10:499-503.
-
(1991)
EMBO J
, vol.10
, pp. 499-503
-
-
Christen, R.1
Ratto, A.2
Baroin, A.3
Perasso, R.4
Grell, K.G.5
Adoutte, A.6
-
11
-
-
0000228203
-
A model of evolutionary change in proteins
-
Dayhoff, M.O., (ed.). Washington, DC: National Biomedical Research Foundation
-
Dayhoff, M.O., Schwartz, R.M., Orcutt, B.C. (1978). A model of evolutionary change in proteins. In: Atlas of Protein Sequence Structure, Vol. 5, Suppl. 3, Dayhoff, M.O., (ed.). Washington, DC: National Biomedical Research Foundation, 345-352.
-
(1978)
Atlas of Protein Sequence Structure
, vol.5
, Issue.3 SUPPL.
, pp. 345-352
-
-
Dayhoff, M.O.1
Schwartz, R.M.2
Orcutt, B.C.3
-
12
-
-
0028455434
-
A PCR-based survey of homeobox genes in Ctenodrilus serratus (Annelida: Polychaeta)
-
Dick, M.H., and Buss, L.W. (1994). A PCR-based survey of homeobox genes in Ctenodrilus serratus (Annelida: Polychaeta). Mol Phylogenet Evol 3:146-158.
-
(1994)
Mol Phylogenet Evol
, vol.3
, pp. 146-158
-
-
Dick, M.H.1
Buss, L.W.2
-
13
-
-
0028083395
-
Evolution of a plant homeotic multigene family: Toward connecting molecular systematics and molecular developmental genetics
-
Doyle, J.J. (1994). Evolution of a plant homeotic multigene family: toward connecting molecular systematics and molecular developmental genetics. Syst Biol 43:307-328.
-
(1994)
Syst Biol
, vol.43
, pp. 307-328
-
-
Doyle, J.J.1
-
15
-
-
11744360130
-
Annelida and Arthropoda are not sister taxa: A phylogenetic analysis of spiralian metazoan morphology
-
Eernisse, D.J., Albert, J.S., and Anderson, F.E. (1992). Annelida and Arthropoda are not sister taxa: a phylogenetic analysis of spiralian metazoan morphology. Syst Biol 41:305-330.
-
(1992)
Syst Biol
, vol.41
, pp. 305-330
-
-
Eernisse, D.J.1
Albert, J.S.2
Anderson, F.E.3
-
16
-
-
84960612286
-
Cladistic permutation tests for monophyly and nonmonophyly
-
Faith, D.P. (1991). Cladistic permutation tests for monophyly and nonmonophyly. Syst Zool 40:366-375.
-
(1991)
Syst Zool
, vol.40
, pp. 366-375
-
-
Faith, D.P.1
-
17
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17:368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
18
-
-
0000461280
-
Confidence limits on phylogenies: And approach using the bootstrap
-
Felsenstein, J. (1985). Confidence limits on phylogenies: and approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
20
-
-
12044259827
-
Is there something wrong with the bootstrap on phylogenies? A reply to Hillis and Bull
-
Felsenstein, J., and Kishino, H. (1993). Is there something wrong with the bootstrap on phylogenies? A reply to Hillis and Bull. Syst Biol 42:193-200.
-
(1993)
Syst Biol
, vol.42
, pp. 193-200
-
-
Felsenstein, J.1
Kishino, H.2
-
21
-
-
0001909023
-
On the classification and evolution of the Ctenophora
-
Morris, S.C., George, J.D., Gibson, R., and Platt, H.M. (eds.). Oxford, U.K.: Clarendon Press
-
Harbison, G.R. (1985). On the classification and evolution of the Ctenophora. In: The Origins and Relationships of Lower Invertebrates, Morris, S.C., George, J.D., Gibson, R., and Platt, H.M. (eds.). Oxford, U.K.: Clarendon Press, p. 78-100.
-
(1985)
The Origins and Relationships of Lower Invertebrates
, pp. 78-100
-
-
Harbison, G.R.1
-
22
-
-
12044253190
-
An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis
-
Hillis, D.M., and Bull, J.J. (1993). An empirical test of bootstrapping as a method for assessing confidence in phylogenetic analysis. Syst Biol 42:182-192.
-
(1993)
Syst Biol
, vol.42
, pp. 182-192
-
-
Hillis, D.M.1
Bull, J.J.2
-
23
-
-
0026069097
-
Rapid and inexpensive protocol for generating greater than 95% recombinants in subcloning experiments
-
Kalvakolanu, D.V., and Livingston, W. (1991). Rapid and inexpensive protocol for generating greater than 95% recombinants in subcloning experiments. Biotechniques 10:176-177.
-
(1991)
Biotechniques
, vol.10
, pp. 176-177
-
-
Kalvakolanu, D.V.1
Livingston, W.2
-
24
-
-
0025862350
-
A cluster of Antennapedia-class homeobox genes in a nonsegmented animal
-
Kenyon, C., and Wang, B. (1991). A cluster of Antennapedia-class homeobox genes in a nonsegmented animal. Science 253:516-517.
-
(1991)
Science
, vol.253
, pp. 516-517
-
-
Kenyon, C.1
Wang, B.2
-
25
-
-
12044253704
-
Improving the accuracy of phylogenetic estimation by combining different methods
-
Kim, J. (1993). Improving the accuracy of phylogenetic estimation by combining different methods. Syst Biol 42:331-340.
-
(1993)
Syst Biol
, vol.42
, pp. 331-340
-
-
Kim, J.1
-
26
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
Kishino, H., and Hasegawa, M. (1989). Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J Mol Evol 29:170-179.
-
(1989)
J Mol Evol
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
27
-
-
0025181359
-
Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
-
Kishino, H., Miyata, T., and Hasegawa, M. (1990). Maximum likelihood inference of protein phylogeny and the origin of chloroplasts. J Mol Evol 30:151-160.
-
(1990)
J Mol Evol
, vol.30
, pp. 151-160
-
-
Kishino, H.1
Miyata, T.2
Hasegawa, M.3
-
28
-
-
2242437849
-
The Ctenophora
-
Gilbert, S. (ed.). Boston: Sinauer Press (in press)
-
Martindale, M.Q., and Henry, J.Q. (1996). The Ctenophora. In: Embryology, The Construction of Life, Gilbert, S. (ed.). Boston: Sinauer Press (in press).
-
(1996)
Embryology, the Construction of Life
-
-
Martindale, M.Q.1
Henry, J.Q.2
-
30
-
-
0026553355
-
Genomes of diploblastic organisms contain homeoboxes: Sequence of eveC, and even-skipped homologue from the cnidarian Acropora formosa
-
Miles, A., and Miller, D.J. (1992). Genomes of diploblastic organisms contain homeoboxes: sequence of eveC, and even-skipped homologue from the cnidarian Acropora formosa. Proc R Soc Land B 248:159-161.
-
(1992)
Proc R Soc Land B
, vol.248
, pp. 159-161
-
-
Miles, A.1
Miller, D.J.2
-
31
-
-
0027386375
-
The fossil record and the early evolution of the Metazoa
-
Morris, S.C. (1993). The fossil record and the early evolution of the Metazoa. Nature 361:219-225.
-
(1993)
Nature
, vol.361
, pp. 219-225
-
-
Morris, S.C.1
-
32
-
-
0025719006
-
Detection of homeobox genes in development and evolution
-
Murtha, M.T., Leckman, J.F., and Ruddle, F.H. (1991). Detection of homeobox genes in development and evolution. Proc Natl Acad Sci USA 88:10711-10715.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10711-10715
-
-
Murtha, M.T.1
Leckman, J.F.2
Ruddle, F.H.3
-
33
-
-
0027483852
-
Presence of eight distinct homeobox-containing genes in cnidarians
-
Naito, M., Ishiguro, H., Fujisawa, T., and Kurosawa, Y. (1993). Presence of eight distinct homeobox-containing genes in cnidarians. FEBS Lett 3:271-274.
-
(1993)
FEBS Lett
, vol.3
, pp. 271-274
-
-
Naito, M.1
Ishiguro, H.2
Fujisawa, T.3
Kurosawa, Y.4
-
35
-
-
0027253981
-
Expansion of the Hox gene family and the evolution of chordates
-
Pendleton, J.W., Nagai, B.K., Murtha, M.T., and Ruddle, F.H. (1993). Expansion of the Hox gene family and the evolution of chordates. Proc Natl Acad Sci USA 90:6300-6304.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6300-6304
-
-
Pendleton, J.W.1
Nagai, B.K.2
Murtha, M.T.3
Ruddle, F.H.4
-
36
-
-
0028557132
-
Evolution of Hox genes
-
Ruddle, F.H., Bartels, J.L., Bentley, K.L., Kappen, C., Murtha, M.T., and Pendleton, J.W. (1994). Evolution of Hox genes. Annu Rev Genet 28:423-442.
-
(1994)
Annu Rev Genet
, vol.28
, pp. 423-442
-
-
Ruddle, F.H.1
Bartels, J.L.2
Bentley, K.L.3
Kappen, C.4
Murtha, M.T.5
Pendleton, J.W.6
-
37
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
38
-
-
0004136246
-
-
Cold Spring Harbor, NY.: Cold Spring Harbor Laboratory Press
-
Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual. Cold Spring Harbor, NY.: Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
39
-
-
0026293820
-
Homeoboxes in cnidarians
-
Schierwater, B., Murtha, M., Dick, M., Ruddle, F.H., and Buss, L.W. (1991). Homeoboxes in cnidarians. J Exp Zool 260:413-416.
-
(1991)
J Exp Zool
, vol.260
, pp. 413-416
-
-
Schierwater, B.1
Murtha, M.2
Dick, M.3
Ruddle, F.H.4
Buss, L.W.5
-
40
-
-
0026295663
-
Cladistic analysis of metazoan phyla and the placement of fossil problematica
-
Simonetta, A.M., and Morris S.C. (eds.). Cambridge, U.K.: Cambridge University Press
-
Schram, F.R. (1991). Cladistic analysis of metazoan phyla and the placement of fossil problematica. In: The Early Evolution of Metazoa and the Significance of Problematic Taxa. Simonetta, A.M., and Morris S.C. (eds.). Cambridge, U.K.: Cambridge University Press, 35-46.
-
(1991)
The Early Evolution of Metazoa and the Significance of Problematic Taxa
, pp. 35-46
-
-
Schram, F.R.1
-
41
-
-
0027395830
-
The Antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution
-
Schubert, F.R., Nieselt-Struwe, K., and Gruss, P. (1993). The Antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution. Proc Natl Acad Sci USA 90:143-147.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 143-147
-
-
Schubert, F.R.1
Nieselt-Struwe, K.2
Gruss, P.3
-
42
-
-
0028343577
-
Homeobox-containing genes in the most primitive metazoa, the sponges
-
Seimiya, M., Ishiguro, H., Miura, K., Watanabe, Y., and Kurosawa, Y. (1994). Homeobox-containing genes in the most primitive metazoa, the sponges. Eur J Biochem 221:219-225.
-
(1994)
Eur J Biochem
, vol.221
, pp. 219-225
-
-
Seimiya, M.1
Ishiguro, H.2
Miura, K.3
Watanabe, Y.4
Kurosawa, Y.5
-
43
-
-
0028710285
-
Hox-type homeoboxes from Stylaria lacustris (Annelida: Oligochaeta)
-
Snow, P., and Buss, L.W. (1994). Hox-type homeoboxes from Stylaria lacustris (Annelida: Oligochaeta). Mol Phylogenet Evol 3:360-364.
-
(1994)
Mol Phylogenet Evol
, vol.3
, pp. 360-364
-
-
Snow, P.1
Buss, L.W.2
-
44
-
-
0006841763
-
The first fossil ctenophore from the Lower Devonian of West Germany
-
Stanley, G.D., and Stürmer, W. (1983). The first fossil ctenophore from the Lower Devonian of West Germany. Nature 303:518-520.
-
(1983)
Nature
, vol.303
, pp. 518-520
-
-
Stanley, G.D.1
Stürmer, W.2
-
46
-
-
12044254346
-
Surveys of gene families using polymerase chain reaction: PCR selection and PCR drift
-
Wagner, A., Blackstone, N., Cartwright, P., Dick, M., Misof, B., Snow, P., Wagner, G.P., Bartels, J., Murtha, M., and Pendleton, J. (1994). Surveys of gene families using polymerase chain reaction: PCR selection and PCR drift. Syst Biol 43:250-261.
-
(1994)
Syst Biol
, vol.43
, pp. 250-261
-
-
Wagner, A.1
Blackstone, N.2
Cartwright, P.3
Dick, M.4
Misof, B.5
Snow, P.6
Wagner, G.P.7
Bartels, J.8
Murtha, M.9
Pendleton, J.10
-
47
-
-
0027241482
-
Monophyletic origins of the metazoa: An evolutionary link with fungi
-
Wainright, P.O., Hinkle, G., Sogin, ML., and Stickel, S.K. (1993). Monophyletic origins of the metazoa: an evolutionary link with fungi. Science 260:340-342.
-
(1993)
Science
, vol.260
, pp. 340-342
-
-
Wainright, P.O.1
Hinkle, G.2
Sogin, M.L.3
Stickel, S.K.4
-
48
-
-
0026764878
-
Conserved classes of homeodomains in Schistosoma mansoni, an early bilateral metazoan
-
Webster, P.J., and Mansour, T.E. (1992). Conserved classes of homeodomains in Schistosoma mansoni, an early bilateral metazoan. Mech Dev 39:25-32.
-
(1992)
Mech Dev
, vol.39
, pp. 25-32
-
-
Webster, P.J.1
Mansour, T.E.2
|