-
1
-
-
0024811753
-
Multipartite genetic control elements: Communication by DNA loop
-
ADHYA, S. (1989) Multipartite genetic control elements: communication by DNA loop. Annu. Rev. Genet. 23, 227-250.
-
(1989)
Annu. Rev. Genet.
, vol.23
, pp. 227-250
-
-
Adhya, S.1
-
2
-
-
0025600461
-
Direct visualization of supercoiled DNA molecules in solution
-
ADRIAX, M., HEGGELER-BORDIER, B., WAHLI, W., STASIAK, A., STASIAK, A. & DUBOCHET, J. (1990). Direct visualization of supercoiled DNA molecules in solution. EMBO J. 9, 4551-4554.
-
(1990)
EMBO J.
, vol.9
, pp. 4551-4554
-
-
Adriax, M.1
Heggeler-Bordier, B.2
Wahli, W.3
Stasiak, A.4
Stasiak, A.5
Dubochet, J.6
-
3
-
-
0028142569
-
Gradual and oriented B-Z transition in 5′-untranscribed region of mouse ribosomal DNA
-
ALBERT, A.-C., ROMAN, A.-M., BOUCHE, G., LENG, M. & RAHMOUNI, R. (1994). Gradual and oriented B-Z transition in 5′-untranscribed region of mouse ribosomal DNA. J. Biol. Chem. 269, 19238-19244.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 19238-19244
-
-
Albert, A.-C.1
Roman, A.-M.2
Bouche, G.3
Leng, M.4
Rahmouni, R.5
-
4
-
-
0027982948
-
p53 binds single-stranded DNA ends and catalyzes DNA renaturation and strand transfer
-
BAKALKIN, G., YAKOVLEVA, T., SELIVANOVA, G., MAGNUSSON, K., SZEKELY, L., KISELEVA, E., KLEIN, G., TERENIUS, L. & WIMAN, K. (1994). p53 binds single-stranded DNA ends and catalyzes DNA renaturation and strand transfer. Proc. Natl. Acad. Sci. USA 91, 413-417.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 413-417
-
-
Bakalkin, G.1
Yakovleva, T.2
Selivanova, G.3
Magnusson, K.4
Szekely, L.5
Kiseleva, E.6
Klein, G.7
Terenius, L.8
Wiman, K.9
-
5
-
-
0026458080
-
DNA-promoted assembly of the active tetramer of the Mu transposase
-
BAKER, T. & MIZUUCHI, K. (1992). DNA-promoted assembly of the active tetramer of the Mu transposase. Gen. & Dev. 6, 2221-2232.
-
(1992)
Gen. & Dev.
, vol.6
, pp. 2221-2232
-
-
Baker, T.1
Mizuuchi, K.2
-
6
-
-
0025168870
-
CAP binding sites reveal pyrimidine-purine pattern characteristic of DNA bending
-
BARBER, A. & ZHURKIN, V. (1990). CAP binding sites reveal pyrimidine-purine pattern characteristic of DNA bending, J. Biomol. Struct. Dyn. 8, 213-232.
-
(1990)
J. Biomol. Struct. Dyn.
, vol.8
, pp. 213-232
-
-
Barber, A.1
Zhurkin, V.2
-
7
-
-
0028049305
-
The twist, write and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix
-
BEDNAR, J., FURRER, P., STASIAK, A. & DUBOCHET, J. (1994). The twist, write and overall shape of supercoiled DNA change during counterion-induced transition from a loosely to a tightly interwound superhelix. J. Mol. Biol. 235, 825-847.
-
(1994)
J. Mol. Biol.
, vol.235
, pp. 825-847
-
-
Bednar, J.1
Furrer, P.2
Stasiak, A.3
Dubochet, J.4
-
8
-
-
0020080870
-
The highly polymorphic region near the human insulin gene is composed of simple tandemly repeating sequences
-
BELL, G., SELBY, M. & RUTTER, W. (1982). The highly polymorphic region near the human insulin gene is composed of simple tandemly repeating sequences. Nature 295, 31-35.
-
(1982)
Nature
, vol.295
, pp. 31-35
-
-
Bell, G.1
Selby, M.2
Rutter, W.3
-
9
-
-
0025934754
-
Model for the interaction of DNA junctions and revolving enzymes
-
BHATTACHARYYA, A., MURCHIE, A., VON KITZTING, E., DIEKMANN, S., KEMPER, B. & LILLEY, D. (1991). Model for the interaction of DNA junctions and revolving enzymes, J. Mol. Biol. 221, 1191-1207.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 1191-1207
-
-
Bhattacharyya, A.1
Murchie, A.2
Von Kitzting, E.3
Diekmann, S.4
Kemper, B.5
Lilley, D.6
-
10
-
-
0028043678
-
Prokaryotic HU and eukaryotic HMGI : A kinked relationship
-
BIANCHI, M. (1994). Prokaryotic HU and eukaryotic HMGI : a kinked relationship. Mol. Microbiol. 14, 1-5.
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 1-5
-
-
Bianchi, M.1
-
11
-
-
0024584528
-
Specific recognition of cruciform DNA by nuclear protein HMGI
-
BIANCHI, M., BELTRAME, M. & PAONESSA, G. (1989). Specific recognition of cruciform DNA by nuclear protein HMGI. Science 243, 1056-1059.
-
(1989)
Science
, vol.243
, pp. 1056-1059
-
-
Bianchi, M.1
Beltrame, M.2
Paonessa, G.3
-
12
-
-
0026089491
-
Curved DNA without A-A: Experimental estimation of all 16 DNA wedge angles
-
BOLSHOY, A., MCNAMARA, P., HARRIXGTON, R. & TRIFONOV, E. (1991). Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles. Proc. Natl. Acad. Sci. USA 88, 2312-2316.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 2312-2316
-
-
Bolshoy, A.1
Mcnamara, P.2
Harrixgton, R.3
Trifonov, E.4
-
13
-
-
0028136642
-
DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA
-
BONNEFOY, E., TAKAHASHI, M. & ROUVIÈRE-YANIV, J. (1994). DNA-binding parameters of the HU protein of Escherichia coli to cruciform DNA. J. Mol. Biol. 242, 116-129.
-
(1994)
J. Mol. Biol.
, vol.242
, pp. 116-129
-
-
Bonnefoy, E.1
Takahashi, M.2
Rouvière-Yaniv, J.3
-
14
-
-
0023162378
-
s promoter mediate its transcriptional response to DNA supercoiling
-
s promoter mediate its transcriptional response to DNA supercoiling. J. Mol. Biol. 195, 89-97.
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 89-97
-
-
Borowiec, J.1
Gralla, J.2
-
15
-
-
0028357411
-
Large-scale opening of a + T rich regions within supercoiled DNA olecules is suppressed by salt
-
BOWATER, R., ABOUL-ELA, F. & LILLEY, D. (1994). Large-scale opening of A + T rich regions within supercoiled DNA olecules is suppressed by salt. Nucleic Acids Res. 22, 2042-2050.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2042-2050
-
-
Bowater, R.1
Aboul-Ela, F.2
Lilley, D.3
-
16
-
-
0024284032
-
Locations and context of sequences that hybridize to poly(dG-dT). (dC-dA) in mammalian ribosomal and two X-linked genes
-
BRAATEN, D., THOMAS, J., LITTLE, R., DICKSON, K., GOLDBERG, L, SCHLESSINGER, D., CICCODICOLA, A. & D'URSO, M. (1988). Locations and context of sequences that hybridize to poly(dG-dT). (dC-dA) in mammalian ribosomal and two X-linked genes. Nucleic Acids Res. 16, 865-881.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 865-881
-
-
Braaten, D.1
Thomas, J.2
Little, R.3
Dickson, K.4
Goldberg, L.5
Schlessinger, D.6
Ciccodicola, A.7
D'Urso, M.8
-
17
-
-
0024284091
-
Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome
-
BRAMHILL, D. & KORNTBERG, A. (1988). Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome. Cell 52, 743-755.
-
(1988)
Cell
, vol.52
, pp. 743-755
-
-
Bramhill, D.1
Korntberg, A.2
-
18
-
-
0016732596
-
Transmission of stability (telestability) in deoxyribonucleic acid
-
BURD, J., WARTELL, R., DODGSON, J. & WELLS, R. (1975). Transmission of stability (telestability) in deoxyribonucleic acid. J. Biol. Chem. 250, 5100-5113.
-
(1975)
J. Biol. Chem.
, vol.250
, pp. 5100-5113
-
-
Burd, J.1
Wartell, R.2
Dodgson, J.3
Wells, R.4
-
19
-
-
0022135313
-
In vivo modulation of yeast tRNA gene expression by 5′ flanking sequences
-
CAMPBELL RAYMOND, K., RAYMOND, G. & JOHNSON, J. (1985). In vivo modulation of yeast tRNA gene expression by 5′ flanking sequences. EMBO J. 4, 2640-2656.
-
(1985)
EMBO J.
, vol.4
, pp. 2640-2656
-
-
Campbell Raymond, K.1
Raymond, G.2
Johnson, J.3
-
20
-
-
0022555857
-
Biological catalysis by RNA
-
CECH, T. & BASS, B. (1986). Biological catalysis by RNA. Annu. Rev. Biochem. 55, 599-629.
-
(1986)
Annu. Rev. Biochem.
, vol.55
, pp. 599-629
-
-
Cech, T.1
Bass, B.2
-
21
-
-
0021166081
-
Correlation of the lac operator imino exchange kinetics with its function
-
CHEUNG, S., ARNDT, K. & Lu, P. (1984). Correlation of the lac operator imino exchange kinetics with its function. Proc. Natl. Acad. Sci. USA 81, 3665-3669.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 3665-3669
-
-
Cheung, S.1
Arndt, K.2
Lu, P.3
-
22
-
-
0023731938
-
A Holliday recombination intermediate is twofold symmetric
-
CHURCHILL, M., TULLIUS, T., KALLENTBACH, N. & SEEMAN, N. (1988). A Holliday recombination intermediate is twofold symmetric. Proc. Natl. Acad. Sci. USA 85, 4653-4656.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 4653-4656
-
-
Churchill, M.1
Tullius, T.2
Kallentbach, N.3
Seeman, N.4
-
23
-
-
0023551842
-
Gel electrophoretic analysis of the geometry of a DNA four-way junction
-
COOPER, J. P. & HAGERMAN, P. J. (1987). Gel electrophoretic analysis of the geometry of a DNA four-way junction. J. Mol. Biol. 198, 711-719.
-
(1987)
J. Mol. Biol.
, vol.198
, pp. 711-719
-
-
Cooper, J.P.1
Hagerman, P.J.2
-
24
-
-
0023807622
-
DNA sequences involved in transcriptional regulation of the mouse β-globin promoter in murine erythroleukemia cells
-
COWIE, A. & MYERS, R. (1988). DNA sequences involved in transcriptional regulation of the mouse β-globin promoter in murine erythroleukemia cells. Mol. Cell Biol. 8, 3122-3128.
-
(1988)
Mol. Cell Biol.
, vol.8
, pp. 3122-3128
-
-
Cowie, A.1
Myers, R.2
-
26
-
-
0024977295
-
Victims or perpetrators of DNA turnover
-
DOVER, G. (1989). Victims or perpetrators of DNA turnover. Nature 342, 347-348.
-
(1989)
Nature
, vol.342
, pp. 347-348
-
-
Dover, G.1
-
27
-
-
0022053771
-
Negative supercoiling induces spontaneous unwinding of a bacterial promoter
-
DREW, H., WEEKS, J. & TRAVERS, A. (1985). Negative supercoiling induces spontaneous unwinding of a bacterial promoter. EMBO J. 4, 1025-1032.
-
(1985)
EMBO J.
, vol.4
, pp. 1025-1032
-
-
Drew, H.1
Weeks, J.2
Travers, A.3
-
28
-
-
0024280885
-
The structure of the Holliday junction and its resolution
-
DUCKETT, R., MURCHIE, A., DIEKMANN, S., VON KITZING, E., KEMPER, B. & LILLEY, D. (1988). The structure of the Holliday junction and its resolution. Cell 55, 70-89.
-
(1988)
Cell
, vol.55
, pp. 70-89
-
-
Duckett, R.1
Murchie, A.2
Diekmann, S.3
Von Kitzing, E.4
Kemper, B.5
Lilley, D.6
-
29
-
-
0025125851
-
The role of metal ions in the conformation of the four-way junction
-
DUCKETT, R., MURCHIE, A. & LILLEY, D. (1990). The role of metal ions in the conformation of the four-way junction. EMBO J. 9, 583-590.
-
(1990)
EMBO J.
, vol.9
, pp. 583-590
-
-
Duckett, R.1
Murchie, A.2
Lilley, D.3
-
30
-
-
0025148348
-
Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
-
ECHOLS, H. (1990). Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination. J. Biol. Chem. 265, 14697-14700.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 14697-14700
-
-
Echols, H.1
-
31
-
-
0026347529
-
Single crystals of long DNA molecules
-
FAIRALL, L. & FINCH, J. (1992). Single crystals of long DNA molecules. J. Bio-mol. Struct. Dyn. 4, 633-642.
-
(1992)
J. Bio-mol. Struct. Dyn.
, vol.4
, pp. 633-642
-
-
Fairall, L.1
Finch, J.2
-
32
-
-
0026030905
-
Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling
-
FIGUEROA, N., WILLS, N. & BOSSI, L. (1991). Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling. EMBO J. 10, 941-949.
-
(1991)
EMBO J.
, vol.10
, pp. 941-949
-
-
Figueroa, N.1
Wills, N.2
Bossi, L.3
-
33
-
-
0025317569
-
Periodicity of DNA folding in higher order chromatin structures
-
FILIPSKI, J., LEBLANC, J., YOUDALE, T., SIKORSKA, M. & WALKER, R. (1990). Periodicity of DNA folding in higher order chromatin structures. EMBO J. 9, 1319-1327.
-
(1990)
EMBO J.
, vol.9
, pp. 1319-1327
-
-
Filipski, J.1
Leblanc, J.2
Youdale, T.3
Sikorska, M.4
Walker, R.5
-
34
-
-
0027934143
-
Sequence dependence of base-pair opening in a dodecamer containing the CACA/GTGT sequence motif
-
FOLTA-STOGNIEW, E. & Russu, I. (1994). Sequence dependence of base-pair opening in a dodecamer containing the CACA/GTGT sequence motif. Biochemistry 33, 11016-11024.
-
(1994)
Biochemistry
, vol.33
, pp. 11016-11024
-
-
Folta-Stogniew, E.1
Russu, I.2
-
35
-
-
0027955162
-
Stabilization of the EBNA I protein on the Epstein-Barr virus latent origin of DNA replication by a DNA looping mechanism
-
FRAPPIER, L., GOLDSMITH, K. & BENDELL, L. (1994). Stabilization of the EBNA I protein on the Epstein-Barr virus latent origin of DNA replication by a DNA looping mechanism. J. Biol. Chem. 269, 1057-1062.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 1057-1062
-
-
Frappier, L.1
Goldsmith, K.2
Bendell, L.3
-
36
-
-
0028278444
-
Association of poly(CA). poly(TG) DNA fragments into four-stranded complexes bound by HMGI and 2
-
GAILLARD, C. & STRAUSS, F. (1994). Association of poly(CA). poly(TG) DNA fragments into four-stranded complexes bound by HMGI and 2. Science 264, 433-436.
-
(1994)
Science
, vol.264
, pp. 433-436
-
-
Gaillard, C.1
Strauss, F.2
-
38
-
-
0023121009
-
Communication between segments of DNA during site-specific recombination
-
GELLERT, M. & NASH, H. (1987). Communication between segments of DNA during site-specific recombination. Nature 325, 401-404.
-
(1987)
Nature
, vol.325
, pp. 401-404
-
-
Gellert, M.1
Nash, H.2
-
39
-
-
0024566478
-
Bacterial gene regulation from distant DNA sites
-
GRALLA, J. (1989). Bacterial gene regulation from distant DNA sites. Cell 57, 193-195.
-
(1989)
Cell
, vol.57
, pp. 193-195
-
-
Gralla, J.1
-
40
-
-
0022766075
-
n' is not detectable in the genomes of eubacteria, archaebacteria or mitochondria
-
n' is not detectable in the genomes of eubacteria, archaebacteria or mitochondria. Mol. Cell. Biol. 6, 3010-3013.
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3010-3013
-
-
Gross, D.1
Garrard, W.2
-
41
-
-
0021013526
-
The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
-
GUERRIER-TAKADA, C., GARDINER, K. MARSH, T., PACE, N. & ALTMAN, S. (1983). The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell 35, 849-857.
-
(1983)
Cell
, vol.35
, pp. 849-857
-
-
Guerrier-Takada, C.1
Gardiner, K.2
Marsh, T.3
Pace, N.4
Altman, S.5
-
42
-
-
0019955810
-
Potential Z-DNA forming sequences are highly dispersed in the human genome
-
HAMADA, H. & KAKUNAGA, T. (1982). Potential Z-DNA forming sequences are highly dispersed in the human genome. Nature 298, 396-398.
-
(1982)
Nature
, vol.298
, pp. 396-398
-
-
Hamada, H.1
Kakunaga, T.2
-
43
-
-
0021707651
-
Enhanced gene expression by the poly(dT-dG) . poly(dC-dA) sequence
-
HAMADA, H., SEIDMAN, M. HOWARD, B. & GORMAN, C. (1984). Enhanced gene expression by the poly(dT-dG) . poly(dC-dA) sequence. Mol. Cell. Biol. 4, 2622-2630.
-
(1984)
Mol. Cell. Biol.
, vol.4
, pp. 2622-2630
-
-
Hamada, H.1
Seidman, M.2
Howard, B.3
Gorman, C.4
-
44
-
-
0020584610
-
Facile transition of poly d(TG).d(CA) into a left handed helix in physiological conditions
-
HANIFORD, D. & PULLEYBLANK, D. (1983). Facile transition of poly d(TG).d(CA) into a left handed helix in physiological conditions. Nature 302, 632-634.
-
(1983)
Nature
, vol.302
, pp. 632-634
-
-
Haniford, D.1
Pulleyblank, D.2
-
45
-
-
0026600019
-
Chromatin dynamic and the modulation of genetic activity
-
HANSEN, J. & AUSIO, J. (1992). Chromatin dynamic and the modulation of genetic activity. Trends Biochem. Sci. 17, 187-191.
-
(1992)
Trends Biochem. Sci.
, vol.17
, pp. 187-191
-
-
Hansen, J.1
Ausio, J.2
-
46
-
-
0026686973
-
DNA curving and bending in protein-DNA recognition
-
HARRINGTON, R. (1992). DNA curving and bending in protein-DNA recognition. Mol. Microbiol. 6, 2549-2555.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 2549-2555
-
-
Harrington, R.1
-
47
-
-
0025040403
-
The Hin invertasome: Protein-mediated joining of distant recombination sites at the enhancer
-
HEICHMAN, K. & JOHNSON, R. (1990). The Hin invertasome: protein-mediated joining of distant recombination sites at the enhancer. Science 249, 511-517.
-
(1990)
Science
, vol.249
, pp. 511-517
-
-
Heichman, K.1
Johnson, R.2
-
48
-
-
0026607171
-
Double helix conformation, groove dimensions and ligand binding potential of a G/C stretch in B-DNA
-
HEINEMAN, U., ALINGS, C. & BANSAL, M. (1992). Double helix conformation, groove dimensions and ligand binding potential of a G/C stretch in B-DNA. EMBO J. II, 1931-1939.
-
(1992)
EMBO J.
, vol.2
, pp. 1931-1939
-
-
Heineman, U.1
Alings, C.2
Bansal, M.3
-
49
-
-
0028364238
-
Multiple DNA conformational changes induced by an initiator protein precede the nicking reaction in a rolling circle replication origin
-
HIGASHITANI, A., GREENSTEIN, D., HIROKLAWA, H., ASANO, S. & HORIUCHI, K. (1994). Multiple DNA conformational changes induced by an initiator protein precede the nicking reaction in a rolling circle replication origin. J. Mol. Biol. 237, 388-400.
-
(1994)
J. Mol. Biol.
, vol.237
, pp. 388-400
-
-
Higashitani, A.1
Greenstein, D.2
Hiroklawa, H.3
Asano, S.4
Horiuchi, K.5
-
50
-
-
84959678845
-
A mechanism for gene conversion in fungi
-
HOLLIDAY, R. (1964). A mechanism for gene conversion in fungi. Genet. Res. 5, 282-304.
-
(1964)
Genet. Res.
, vol.5
, pp. 282-304
-
-
Holliday, R.1
-
51
-
-
0023234549
-
Poly (dC-dA/dG-dT) repeats in the drosophila genome: A key function for dosage compensation and position effect?
-
HUIJSER, P., HENNING, W. & DIJKHOF, R. (1987). Poly (dC-dA/dG-dT) repeats in the drosophila genome: a key function for dosage compensation and position effect? Chromosoma 95, 209-215.
-
(1987)
Chromosoma
, vol.95
, pp. 209-215
-
-
Huijser, P.1
Henning, W.2
Dijkhof, R.3
-
52
-
-
0025719104
-
In vivo protein-DNA interactions at the β-globin gene locus
-
IKUTA, T. & KAN, Y. W. (1991). In vivo protein-DNA interactions at the β-globin gene locus. Proc. Natl. Acad. Sci. USA 88, 10188-10192.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 10188-10192
-
-
Ikuta, T.1
Kan, Y.W.2
-
53
-
-
0024992188
-
'Macromolecular crowding ' : Thermodynamic consequences for protein-protein interactions within the T4 DNA replication complex
-
JARVIS, T., RING, D., DAUBE, S. & VON HIPPEL, P. J. (1990). 'Macromolecular crowding ' : thermodynamic consequences for protein-protein interactions within the T4 DNA replication complex. Biol. Chem. 265, 15160-15167.
-
(1990)
Biol. Chem.
, vol.265
, pp. 15160-15167
-
-
Jarvis, T.1
Ring, D.2
Daube, S.3
Von Hippel, P.J.4
-
54
-
-
0022133407
-
Chemical probes of DNA conformation: Detection of Z-DNA at nucleotide resolution
-
JOHNSTON, B. & RICH, A. (1985). Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution. Cell 42, 713-724.
-
(1985)
Cell
, vol.42
, pp. 713-724
-
-
Johnston, B.1
Rich, A.2
-
55
-
-
0001731921
-
Roles of supercoiled DNA structure in DNA transactions
-
KANAAR, R. & COZZARELLI, N. (1922). Roles of supercoiled DNA structure in DNA transactions. Curr. Opin. Struct. Biol. 2, 369-379.
-
(1922)
Curr. Opin. Struct. Biol.
, vol.2
, pp. 369-379
-
-
Kanaar, R.1
Cozzarelli, N.2
-
56
-
-
0025376429
-
Processive recombination by the phage Mu Gin system : Implication for the mechanism of DNA strand exchange, DNA site alignment, and enhancer action
-
KANAAR, R., KLIPPEL, A., SHEKHTMAN, E., DUNGAN, J. KAHMANN, R. & COZZARELLI, N. (1990). Processive recombination by the phage Mu Gin system : implication for the mechanism of DNA strand exchange, DNA site alignment, and enhancer action. Cell 62, 353-366.
-
(1990)
Cell
, vol.62
, pp. 353-366
-
-
Kanaar, R.1
Klippel, A.2
Shekhtman, E.3
Dungan, J.4
Kahmann, R.5
Cozzarelli, N.6
-
57
-
-
0025055216
-
S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase II, while TFIIIA and TFIIIC are assembly factors
-
KASSAVETIS, G., BRAUN, B., NGUYEN, L. & GEIDUSCHEK, P. (1990). S. cerevisiae TFIIIB is the transcription initiation factor proper of RNA polymerase II, while TFIIIA and TFIIIC are assembly factors. Cell 60, 235-245.
-
(1990)
Cell
, vol.60
, pp. 235-245
-
-
Kassavetis, G.1
Braun, B.2
Nguyen, L.3
Geiduschek, P.4
-
58
-
-
0026692192
-
Formation of open and elongating transcription complexes by RNA polymerase III
-
KASSAVETIS, O., BLANCO, J., JOHNSON, T. & GEIDUSCHEK, P. (1992). Formation of open and elongating transcription complexes by RNA polymerase III. J. Mol. Biol. 226, 47-58.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 47-58
-
-
Kassavetis, O.1
Blanco, J.2
Johnson, T.3
Geiduschek, P.4
-
59
-
-
0021185903
-
Intervening sequences in human fetal globin genes adopt left-handed Z helices
-
KILPATRICK, M., KLYSIK, J., SINGLETON, C., ZARLING, D., JOVIN, T., HANAU, L., ERLANGER, B. & WELLS, R. (1984). Intervening sequences in human fetal globin genes adopt left-handed Z helices. J. Biol. Chem. 259, 7268-7274.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 7268-7274
-
-
Kilpatrick, M.1
Klysik, J.2
Singleton, C.3
Zarling, D.4
Jovin, T.5
Hanau, L.6
Erlanger, B.7
Wells, R.8
-
60
-
-
0027474989
-
Multiple transitions to non B-DNA structures occur in the distal region of the rat prolactin gene
-
KLADDE, M., D'CUNHA, J. & GORSKI, J. (1993). Multiple transitions to non B-DNA structures occur in the distal region of the rat prolactin gene. J. Mol. Biol. 229, 344-367.
-
(1993)
J. Mol. Biol.
, vol.229
, pp. 344-367
-
-
Kladde, M.1
D'Cunha, J.2
Gorski, J.3
-
62
-
-
0028241541
-
DNA strand exchange in the absence of homologous pairing
-
KMIEC, E. & HOLLOMAN, W. (1994). DNA strand exchange in the absence of homologous pairing, J. Biol. Chem. 269, 10163-10168.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 10163-10168
-
-
Kmiec, E.1
Holloman, W.2
-
63
-
-
0342927819
-
Stable DNA unwinding, not breathing, accounts for single strand specific nuclease hypersensitivity of specific A+ T rich sequences
-
KOWALSKI, D., NATALE, D. & EDDY, M. (1988). Stable DNA unwinding, not breathing, accounts for single strand specific nuclease hypersensitivity of specific A+ T rich sequences. Proc, Natl. Acad. Sci. USA 85, 9464-9468.
-
(1988)
Proc, Natl. Acad. Sci. USA
, vol.85
, pp. 9464-9468
-
-
Kowalski, D.1
Natale, D.2
Eddy, M.3
-
64
-
-
0024786678
-
The DNA unwinding element: A novel, cis-acting component that facilitates opening of the Escherichia coli replication origin
-
KOWALSKI, D. & EDDY, M. (1989). The DNA unwinding element: a novel, cis-acting component that facilitates opening of the Escherichia coli replication origin. EMBO J. 8, 4335-4344.
-
(1989)
EMBO J.
, vol.8
, pp. 4335-4344
-
-
Kowalski, D.1
Eddy, M.2
-
65
-
-
0022154541
-
Poly(dG)-poly(dC) sequences, under torsional stress, induces an altered DNA conformation upon neighboring DNA sequences
-
KOWHI-SHIGEMATSU, T. & KOWHI, Y. (1985). Poly(dG)-poly(dC) sequences, under torsional stress, induces an altered DNA conformation upon neighboring DNA sequences. Cell 43, 199-206.
-
(1985)
Cell
, vol.43
, pp. 199-206
-
-
Kowhi-Shigematsu, T.1
Kowhi, Y.2
-
66
-
-
0026619532
-
Organization of specific DNA sequence elements in the region of the replication origin and matrix attachment site in the chicken a-globin gene domain
-
KRAJEWSKI, W. & RAZIN, S. (1992). Organization of specific DNA sequence elements in the region of the replication origin and matrix attachment site in the chicken a-globin gene domain. Mol. Gen. Genet. 235, 381-388.
-
(1992)
Mol. Gen. Genet.
, vol.235
, pp. 381-388
-
-
Krajewski, W.1
Razin, S.2
-
68
-
-
10644284474
-
Materials with structural hierarchy
-
LAKES, R. (1993).; Materials with structural hierarchy. Nature 361, 511-515.
-
(1993)
Nature
, vol.361
, pp. 511-515
-
-
Lakes, R.1
-
69
-
-
0026795172
-
Enhancement of recA protein-promoted DNA strand exchange activity by volume-occupying agents
-
LAVERY, P. & KOWALCZYKOWSKI, S. J. (1992). Enhancement of recA protein-promoted DNA strand exchange activity by volume-occupying agents. Biol. Chem. 267, 9307-9314.
-
(1992)
Biol. Chem.
, vol.267
, pp. 9307-9314
-
-
Lavery, P.1
Kowalczykowski, S.J.2
-
70
-
-
0028143614
-
CRP fixes the rotational orientation of covalently closed DNA molecules
-
LAVIGNE, M., KOLB, A., YERAMIAN, E. & Buc, H. (1994). CRP fixes the rotational orientation of covalently closed DNA molecules. EMBO J. 13, 4983-4990.
-
(1994)
EMBO J.
, vol.13
, pp. 4983-4990
-
-
Lavigne, M.1
Kolb, A.2
Yeramian, E.3
Buc, H.4
-
71
-
-
0028302290
-
A second high affinity HU binding site in the phage Mu transposome
-
LAVOIE, B. & CHACONAS, G. (1994). A second high affinity HU binding site in the phage Mu transposome. J. Biol. Chem. 269, 15571-15576.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 15571-15576
-
-
Lavoie, B.1
Chaconas, G.2
-
72
-
-
0019572104
-
Unwinding of double stranded DNA helix by dehydration
-
LEE, C.-H., MIZUSAWA, H. & KAKEFUDA, T. (1981). Unwinding of double stranded DNA helix by dehydration. Proc. Natl. Acad. Sci. USA 78, 2838-2842.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 2838-2842
-
-
Lee, C.-H.1
Mizusawa, H.2
Kakefuda, T.3
-
73
-
-
0000085382
-
The relationship of structure to the effectiveness of denaturing agents for deoxyribonucleic acid
-
LEVINE, L., GORDON, J. & JENCKS, W. (1963). The relationship of structure to the effectiveness of denaturing agents for deoxyribonucleic acid. Biochemistry 2, 168-175.
-
(1963)
Biochemistry
, vol.2
, pp. 168-175
-
-
Levine, L.1
Gordon, J.2
Jencks, W.3
-
74
-
-
0026659070
-
HMG has DNA wrapped up
-
LILLEY, D. (1992). HMG has DNA wrapped up. Nature 357, 282-283.
-
(1992)
Nature
, vol.357
, pp. 282-283
-
-
Lilley, D.1
-
75
-
-
0027486238
-
The structure of branched DNA species
-
LILLEY, D. & CLEGG, R. (1993). The structure of branched DNA species. Q. Rev. Biophys. 26, 131-175.
-
(1993)
Q. Rev. Biophys.
, vol.26
, pp. 131-175
-
-
Lilley, D.1
Clegg, R.2
-
77
-
-
0027403859
-
Structure of the B-DNA decamer CCAACITTGG in two different space groups: Conformational flexibility of B-DNA
-
LIPANOV, A., KOPKA, M., KAKZOR-GRESKOWIAK, M., QUINTANA, J. & DICKERSON, R. (1993). Structure of the B-DNA decamer CCAACITTGG In two different space groups: conformational flexibility of B-DNA. Biochemistry 32, 1373-1389.
-
(1993)
Biochemistry
, vol.32
, pp. 1373-1389
-
-
Lipanov, A.1
Kopka, M.2
Kakzor-Greskowiak, M.3
Quintana, J.4
Dickerson, R.5
-
78
-
-
0020963555
-
Possible detent in DNA structure at regulatory sequences
-
LU, P., CHEUG, S. & ARNDT, K. (1983). Possible detent in DNA structure at regulatory sequences. J. Biomolec. Struct. Dyn. I, 509-521.
-
(1983)
J. Biomolec. Struct. Dyn.
, vol.1
, pp. 509-521
-
-
Lu, P.1
Cheug, S.2
Arndt, K.3
-
79
-
-
0027159020
-
CA runs increase DNA flexibility in the complex of λ Cro protein with the OR3 site
-
LYUBCHENKO, Y., SHLYAKHTEKKO, L., APPELLA, E. & HARRINGTON, R. (1993). CA runs increase DNA flexibility in the complex of λ Cro protein with the OR3 site. Biochemistry 32, 4121-4127.
-
(1993)
Biochemistry
, vol.32
, pp. 4121-4127
-
-
Lyubchenko, Y.1
Shlyakhtekko, L.2
Appella, E.3
Harrington, R.4
-
80
-
-
0024335071
-
Rotational orientation of upstream curved DNA effects promoter function in bacillus subtilis
-
MCALLISTER, C. & ACHBERGER, E. (1989). Rotational orientation of upstream curved DNA effects promoter function in bacillus subtilis. J. Biol. Chem. 264, 10451-10456.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 10451-10456
-
-
Mcallister, C.1
Achberger, E.2
-
81
-
-
0023884934
-
The role of DNA sequence in the formation of Z-DNA versus cruciform in plasmids
-
MCLEAX, M. & WELLS, R. (1988). The role of DNA sequence in the formation of Z-DNA versus cruciform in plasmids. J. Biol. Chem. 263, 7370-7377.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 7370-7377
-
-
Mcleax, M.1
Wells, R.2
-
82
-
-
0015527727
-
Formation of hybrid DNA by rotary diffusion during genetic recombination
-
MESELSON, M. (1972). Formation of hybrid DNA by rotary diffusion during genetic recombination, J. Mol. Biol. 71, 795-798.
-
(1972)
J. Mol. Biol.
, vol.71
, pp. 795-798
-
-
Meselson, M.1
-
83
-
-
0024449642
-
Transcriptional activation of Klebsiella pneumoniae nifLA promoter by NTRC is face-of-helix dependent and the activator stabilizes the interaction of sigma 54-RNA polymerase with the promoter
-
MINCHIN, S., AUSTIN, S. & DIXON, R. (1989). Transcriptional activation of Klebsiella pneumoniae nifLA promoter by NTRC is face-of-helix dependent and the activator stabilizes the interaction of sigma 54-RNA polymerase with the promoter. EMBO J. 8, 3491-3499.
-
(1989)
EMBO J.
, vol.8
, pp. 3491-3499
-
-
Minchin, S.1
Austin, S.2
Dixon, R.3
-
84
-
-
84985735713
-
Excluded volume as a determinant for macromolecular structure and reactivity
-
MINTON, A. (1981). Excluded volume as a determinant for macromolecular structure and reactivity, Biopolymers 20, 2093-2120.
-
(1981)
Biopolymers
, vol.20
, pp. 2093-2120
-
-
Minton, A.1
-
85
-
-
0020668187
-
The effect of volume occupancy upon the thermodynamic activity of protein: Some biochemical consequences
-
MINTON, A. (1993). The effect of volume occupancy upon the thermodynamic activity of protein: some biochemical consequences. Mol. Cell. Biochem. 55, 119-140.
-
(1993)
Mol. Cell. Biochem.
, vol.55
, pp. 119-140
-
-
Minton, A.1
-
86
-
-
0026708067
-
Assembly of the active form of the transposase-Mu DNA complex: A critical control point in Mu transposition
-
MIZUUCHI, M., BAKER, T. & MIZUUCHI, K. (1992). Assembly of the active form of the transposase-Mu DNA complex: a critical control point in Mu transposition. Cell 70, 303-311.
-
(1992)
Cell
, vol.70
, pp. 303-311
-
-
Mizuuchi, M.1
Baker, T.2
Mizuuchi, K.3
-
87
-
-
0028349806
-
Uranyl photoprobing of a four-way DNA junction : Evidence for specific metal ion binding
-
MOLLEGAARD, N. E., MURCHIE, A., LILLEY, D. & NIELSEN, P. (1994). Uranyl photoprobing of a four-way DNA junction : evidence for specific metal ion binding. EMBO J. 13, 1508-1513.
-
(1994)
EMBO J.
, vol.13
, pp. 1508-1513
-
-
Mollegaard, N.E.1
Murchie, A.2
Lilley, D.3
Nielsen, P.4
-
89
-
-
0024284848
-
Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein
-
MUKHERJEE, S., ERICKSON, H. & BASTIA, D. (1988). Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein. Cell 52, 375-383.
-
(1988)
Cell
, vol.52
, pp. 375-383
-
-
Mukherjee, S.1
Erickson, H.2
Bastia, D.3
-
90
-
-
0024458010
-
Fluorescence energy transfer shows that the four-way DNA junction is a righthanded cross of antiparallel molecule
-
MURCHIE, A., CLEGG, R., VON KITZING, E., DUCKETT, D., DIEKMANN, S. & LILLEY, D. (1989). Fluorescence energy transfer shows that the four-way DNA junction is a righthanded cross of antiparallel molecule. Nature 341, 763-766.
-
(1989)
Nature
, vol.341
, pp. 763-766
-
-
Murchie, A.1
Clegg, R.2
Von Kitzing, E.3
Duckett, D.4
Diekmann, S.5
Lilley, D.6
-
91
-
-
0026582039
-
Helix opening transitions in supercoiled DNA
-
MURCHIE, A., BOWATER, R., ABOUL-ELA, F. & LILLEY, D. (1992). Helix opening transitions in supercoiled DNA. Biochim. Biophys. Acta 1131, 1-15.
-
(1992)
Biochim. Biophys. Acta
, vol.1131
, pp. 1-15
-
-
Murchie, A.1
Bowater, R.2
Aboul-Ela, F.3
Lilley, D.4
-
92
-
-
0025285536
-
Bending and supercoiling of DNA at the attachment site of bacteriophage λ
-
NASH, H. (1991). Bending and supercoiling of DNA at the attachment site of bacteriophage λ. Trends Biochem. Sci. 15, 222-227.
-
(1991)
Trends Biochem. Sci.
, vol.15
, pp. 222-227
-
-
Nash, H.1
-
93
-
-
0028200990
-
CA/TG sequence at the 5′ end of oligo(A)-tracts strongly modulates DNA curvature
-
NAGAICH, A., BHATTACHARYYA, D., BRAHMACHARI, S. & BANSAL, M. (1994). CA/TG sequence at the 5′ end of oligo(A)-tracts strongly modulates DNA curvature, J. Biol. Chem. 269, 7824-7833.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 7824-7833
-
-
Nagaich, A.1
Bhattacharyya, D.2
Brahmachari, S.3
Bansal, M.4
-
94
-
-
0026548222
-
DNA helical stability accounts for mutational effects in a yeast replication origin
-
NATALE, D., SCHUBERT, A. & KOWALSKI, D. (1992). DNA helical stability accounts for mutational effects in a yeast replication origin. Proc. Natl. Acad. Sci. USA 89, 2654-2658.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 2654-2658
-
-
Natale, D.1
Schubert, A.2
Kowalski, D.3
-
95
-
-
0025276590
-
n sequences upstream of the rat prolactin gene form Z-DNA and inhibit gene transcription
-
n sequences upstream of the rat prolactin gene form Z-DNA and inhibit gene transcription. Nucleic Acids Res. 18, 1595-1601.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 1595-1601
-
-
Naylor, L.1
Clark, E.2
-
96
-
-
0027284915
-
p53-catalyzed annealing of complementary single stranded nucleic acids
-
OBEROSLER, P., HLOCH, P., RAMSPERGER, U. & STAHL, H. (1993). p53-catalyzed annealing of complementary single stranded nucleic acids. EMBO J. 12, 2389-2396.
-
(1993)
EMBO J.
, vol.12
, pp. 2389-2396
-
-
Oberosler, P.1
Hloch, P.2
Ramsperger, U.3
Stahl, H.4
-
97
-
-
0028341841
-
Dynamics of the nucleoprotein structure of simian virus 40 regulatory region during viral development
-
OPPENHEIM, A., SIANI, M., SANDALON, Z. & MENGERITSKY, G. (1994). Dynamics of the nucleoprotein structure of simian virus 40 regulatory region during viral development. J. Mol. Biol. 238, 501-513.
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 501-513
-
-
Oppenheim, A.1
Siani, M.2
Sandalon, Z.3
Mengeritsky, G.4
-
98
-
-
0028343925
-
The kinetic of spontaneous DNA branch migration
-
PANYUTIN, I. & HSIEH, P. (1994), The kinetic of spontaneous DNA branch migration. Proc. Natl. Acad. Sci. USA 91, 2021-2025.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 2021-2025
-
-
Panyutin, I.1
Hsieh, P.2
-
99
-
-
0023357159
-
n sequences have evolutionary conserved chromosomal locations in drosophila with implications for roles in chromosome structure and function
-
n sequences have evolutionary conserved chromosomal locations in drosophila with implications for roles in chromosome structure and function. EMBO J. 6, 1781-1789.
-
(1987)
EMBO J.
, vol.6
, pp. 1781-1789
-
-
Pardue, M.L.1
Lowenhaupt, K.2
Rich, A.3
Nordheim, A.4
-
100
-
-
0025817867
-
Dynamic of long range interaction on DNA: The speed of synapsis during site-specific recombination of resolvase
-
PARKER, C. & HALFORD, S. (1991). Dynamic of long range interaction on DNA: the speed of synapsis during site-specific recombination of resolvase. Cell 66, 781-791.
-
(1991)
Cell
, vol.66
, pp. 781-791
-
-
Parker, C.1
Halford, S.2
-
101
-
-
0026741832
-
Interaction of Esckerichia coli RuvA and RuvB proteins with synthetic Holliday junction
-
PARSONS, C., TSANEVA, L, LLOYD, R. & WEST, S. (1992). Interaction of Esckerichia coli RuvA and RuvB proteins with synthetic Holliday junction. Proc. Natl. Acad. Sci. USA 89, 5452-5456.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5452-5456
-
-
Parsons, C.1
Tsaneva, L.2
Lloyd, R.3
West, S.4
-
102
-
-
0025292742
-
The β-globin dominant control region: Hypersensitive site 2
-
PHILIPSEN, S., TALBOT, D., FRASER, P. & GROSVELT, F. (1990). The β-globin dominant control region: hypersensitive site 2. EMBO J. 9, 2159-2167.
-
(1990)
EMBO J.
, vol.9
, pp. 2159-2167
-
-
Philipsen, S.1
Talbot, D.2
Fraser, P.3
Grosvelt, F.4
-
103
-
-
0028063567
-
The three-dimensional structure of a hammerhead ribozyme
-
PLEY, H., FLAHERTY, K. & MCKAY, D. (1994). The three-dimensional structure of a hammerhead ribozyme. Nature 372, 68-74.
-
(1994)
Nature
, vol.372
, pp. 68-74
-
-
Pley, H.1
Flaherty, K.2
Mckay, D.3
-
104
-
-
0021807208
-
Chidependent DNA strand cleavage by Rec BC enzyme
-
PONTICELLI, A. S., SCHULTZ, D. W., TAYLOR, A. F. & SMITH, G. R. (1985). Chidependent DNA strand cleavage by Rec BC enzyme. Cell 41, 145-151.
-
(1985)
Cell
, vol.41
, pp. 145-151
-
-
Ponticelli, A.S.1
Schultz, D.W.2
Taylor, A.F.3
Smith, G.R.4
-
105
-
-
0027503254
-
Protein HU binds specifically to kinked DNA
-
PONTIGGIA, A., NEGRI, A., BELTRAME, M. & BIANCHI, M. (1993). Protein HU binds specifically to kinked DNA. Mol. Microbiol. 7, 343-350.
-
(1993)
Mol. Microbiol.
, vol.7
, pp. 343-350
-
-
Pontiggia, A.1
Negri, A.2
Beltrame, M.3
Bianchi, M.4
-
106
-
-
0024598928
-
Function of a bacterial activator protein that binds to transcriptional enhancers
-
POPHAM, D., SZETO, D., KEENER, J. & KUSTU, S. (1989). Function of a bacterial activator protein that binds to transcriptional enhancers. Science 243, 629-634.
-
(1989)
Science
, vol.243
, pp. 629-634
-
-
Popham, D.1
Szeto, D.2
Keener, J.3
Kustu, S.4
-
107
-
-
0026059567
-
Structure of the B-DNA decamer CCAACGTTGG and comparison with the isomorphous decamers CCAAGATTGG and CCAGGCCTGG
-
PRIVÉ, G., YANAGI, K. & DICKERSON, R. (1991). Structure of the B-DNA decamer CCAACGTTGG and comparison with the isomorphous decamers CCAAGATTGG and CCAGGCCTGG. J. Mol. Biol. 217, 177-199.
-
(1991)
J. Mol. Biol.
, vol.217
, pp. 177-199
-
-
Privé, G.1
Yanagi, K.2
Dickerson, R.3
-
108
-
-
0024578495
-
DNA supercoiling and prokaryotic transcription
-
PRUSS, G. & DRLICA, K. (1989). DNA supercoiling and prokaryotic transcription. Cell 56, 521-523.
-
(1989)
Cell
, vol.56
, pp. 521-523
-
-
Pruss, G.1
Drlica, K.2
-
109
-
-
0022447855
-
Gene regulation by protein acting nearby and at a distance
-
PTASHNE, M. (1986). Gene regulation by protein acting nearby and at a distance. Nature 232, 697-701.
-
(1986)
Nature
, vol.232
, pp. 697-701
-
-
Ptashne, M.1
-
110
-
-
0027469983
-
Assembly of a functional replication complex without ATP hydrolysis : A direct interaction of bacteriophage T4 gp45 with T4 DNA polymerase
-
REDDY, M., WEITZEL, S. & VON HIPPEL, P. (1993). Assembly of a functional replication complex without ATP hydrolysis : a direct interaction of bacteriophage T4 gp45 with T4 DNA polymerase. Proc. Natl. Acad. Sci. USA 90, 3211-3215.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3211-3215
-
-
Reddy, M.1
Weitzel, S.2
Von Hippel, P.3
-
111
-
-
0020963166
-
Three dimensional association of double stranded helices are produced in conditions for Z-DNA formation
-
REVET, B., DELAIN, E., DANTE, R. & NIVELEAU, A. (1983). Three dimensional association of double stranded helices are produced in conditions for Z-DNA formation. J. Biomol. Struct. Dyn. I, 857-871.
-
(1983)
J. Biomol. Struct. Dyn.
, vol.1
, pp. 857-871
-
-
Revet, B.1
Delain, E.2
Dante, R.3
Niveleau, A.4
-
112
-
-
0021119770
-
The chemistry and biology of lefthanded Z-DNA
-
RICH, A., NORDHEIM, A. & WANG, H.-J. (1984). The chemistry and biology of lefthanded Z-DNA. Annu. Rev. Biochem. 53, 791-846.
-
(1984)
Annu. Rev. Biochem.
, vol.53
, pp. 791-846
-
-
Rich, A.1
Nordheim, A.2
Wang, H.-J.3
-
113
-
-
0025736729
-
Supercoiling is essential for the formation and stability of the initiation complex at the divertent malEp and malKp promoters
-
RICHET, E. & RAIBAUT, O. (1991). Supercoiling is essential for the formation and stability of the initiation complex at the divertent malEp and malKp promoters. J. Mol. Biol. 218, 529-542.
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 529-542
-
-
Richet, E.1
Raibaut, O.2
-
114
-
-
0026448670
-
The capture of a double helix by an ATP-dependent protein clamp: A key step in DNA transport by type II DNA topoisomerases
-
ROCA, J. & WANG, J. (1992). The capture of a double helix by an ATP-dependent protein clamp: a key step in DNA transport by type II DNA topoisomerases. Cell 71, 833-840.
-
(1992)
Cell
, vol.71
, pp. 833-840
-
-
Roca, J.1
Wang, J.2
-
115
-
-
0021097864
-
CACA sequences -the ends and the means
-
RODGERS, J. (1983). CACA sequences -the ends and the means. Nature 305, 101-102.
-
(1983)
Nature
, vol.305
, pp. 101-102
-
-
Rodgers, J.1
-
116
-
-
0348026706
-
Probing the Escherichia coli glnALG upstream activation mechanism in vivo
-
SASSE-DWIGHT, S. & GRALLA, J. (1988). Probing the Escherichia coli glnALG upstream activation mechanism in vivo. Proc. Natl. Acad. Sci. USA 85, 8934-8938.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 8934-8938
-
-
Sasse-Dwight, S.1
Gralla, J.2
-
117
-
-
0024474697
-
4 as a probe for lac promoter DNA melting and mechanism in vivo
-
4 as a probe for lac promoter DNA melting and mechanism in vivo. J. Biol. Chem. 264, 8074-8081.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 8074-8081
-
-
Sasse-Dwight, S.1
Gralla, J.2
-
118
-
-
0023837775
-
Initiation protein induced helix destabilization at the λ origin: A prepriming step in DNA replication
-
SCHNOS, M., ZAHN, K., INMAN, R. & BLATTNER, F. (1988). Initiation protein induced helix destabilization at the λ origin: a prepriming step in DNA replication. Cell 52, 385-395.
-
(1988)
Cell
, vol.52
, pp. 385-395
-
-
Schnos, M.1
Zahn, K.2
Inman, R.3
Blattner, F.4
-
119
-
-
0025914242
-
Crystal structure of a CAP-DNA complex: The DNA is bent by 90°
-
SCHULTZ, S., SHIELDS, G. & STEITZ, T. (1991). Crystal structure of a CAP-DNA complex: the DNA is bent by 90°. Science 253, 1001-1007.
-
(1991)
Science
, vol.253
, pp. 1001-1007
-
-
Schultz, S.1
Shields, G.2
Steitz, T.3
-
120
-
-
0028147923
-
Architectural elements in nucleoprotein complexes: Interchangeability of specific and non-specific DNA binding proteins
-
SEGALL, A., GOODMAN, S. & NASH, H. (1994). Architectural elements in nucleoprotein complexes: interchangeability of specific and non-specific DNA binding proteins. EMBO J. 13, 4536-4548.
-
(1994)
EMBO J.
, vol.13
, pp. 4536-4548
-
-
Segall, A.1
Goodman, S.2
Nash, H.3
-
121
-
-
0028315988
-
Determinants of repressor/operator recognition from the structure of the trp operator binding site
-
SHAKKED, Z., GUZIKEVICH-GUERSTEIN, G., FROLOW, F., RABINOVICH, D., JOACHIMIAK, A. & SIGLER, P. (1994). Determinants of repressor/operator recognition from the structure of the trp operator binding site. Nature 368, 469-473.
-
(1994)
Nature
, vol.368
, pp. 469-473
-
-
Shakked, Z.1
Guzikevich-Guerstein, G.2
Frolow, F.3
Rabinovich, D.4
Joachimiak, A.5
Sigler, P.6
-
122
-
-
0027200062
-
Knotting of a DNA chain during ring closure
-
SHAW, S. & WANG, J. (1993). Knotting of a DNA chain during ring closure. Science 260, 533-536.
-
(1993)
Science
, vol.260
, pp. 533-536
-
-
Shaw, S.1
Wang, J.2
-
123
-
-
0028345258
-
A thermodynamic investigation of the melting of B-Z junction forming DNA oligomers
-
SHEARDY, R., LEVINE, N., MAROTTA, S., SUH, D. & CHAIRES, J. (1994). A thermodynamic investigation of the melting of B-Z junction forming DNA oligomers. Biochemistry 33, 1385-1391.
-
(1994)
Biochemistry
, vol.33
, pp. 1385-1391
-
-
Sheardy, R.1
Levine, N.2
Marotta, S.3
Suh, D.4
Chaires, J.5
-
124
-
-
0025840332
-
Recombination mediated by vaccina virus topoisomerase I in Escherichia coli is sequence specific
-
SHUMAN, S. (1991). Recombination mediated by vaccina virus topoisomerase I in Escherichia coli is sequence specific. Proc. Natl. Acad. Sci. USA 88, 10104-10108.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 10104-10108
-
-
Shuman, S.1
-
125
-
-
0015527750
-
Genetic recombination: The nature of a crossed strand exchange between two homologous DNA molecules
-
SIGAL, N. & ALBERTS, B. (1973). Genetic recombination: the nature of a crossed strand exchange between two homologous DNA molecules. J. Mol. Biol. 71, 789-793.
-
(1973)
J. Mol. Biol.
, vol.71
, pp. 789-793
-
-
Sigal, N.1
Alberts, B.2
-
126
-
-
0026345115
-
Accelerated DNA renaturation : Complementary recognition in condensed DNA
-
SIKORAV, J.-L. & CHURCH, G. (1991). Accelerated DNA renaturation : complementary recognition in condensed DNA. J. Mol. Biol. 222, 1085-1108.
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 1085-1108
-
-
Sikorav, J.-L.1
Church, G.2
-
127
-
-
0024454281
-
Knotting of a DNA chain during ring closure
-
STARK, M., BOOCOCK, M. & SHERRATT, D. (1989). Knotting of a DNA chain during ring closure. Trends Genet. 5, 304-309.
-
(1989)
Trends Genet.
, vol.5
, pp. 304-309
-
-
Stark, M.1
Boocock, M.2
Sherratt, D.3
-
128
-
-
0026581223
-
The Mu transpositional enhancer can function in trans : Requirement of the enhancer for synapsis but not strand cleavage
-
SURETTE, M. & CHACONAS, G. (1992). The Mu transpositional enhancer can function in trans : requirement of the enhancer for synapsis but not strand cleavage. Cell 68, 1101-1108.
-
(1992)
Cell
, vol.68
, pp. 1101-1108
-
-
Surette, M.1
Chaconas, G.2
-
129
-
-
0023651455
-
DNA dentures upon drying after ethanol precipitation
-
SVAREN, J., INAGAMI, S., LOVERGREN, E. & CHALKLEY, R. (1987). DNA dentures upon drying after ethanol precipitation. Nucleic Acids Res. 15, 8739-8754.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 8739-8754
-
-
Svaren, J.1
Inagami, S.2
Lovergren, E.3
Chalkley, R.4
-
130
-
-
0025174655
-
The structure of active chromatin
-
SVAREN, J. & CHALKLEY, R. (1990). the structure of active chromatin. Trends Genet. 6, 52-56.
-
(1990)
Trends Genet.
, vol.6
, pp. 52-56
-
-
Svaren, J.1
Chalkley, R.2
-
131
-
-
0029036254
-
Base-pair opening and spermine binding B-DNA features displayed in crystal structure of a gal operon fragment : Implications for protein-DNA recognition
-
TARI, L. & SECCO, A. (1995). Base-pair opening and spermine binding B-DNA features displayed in crystal structure of a gal operon fragment : implications for protein-DNA recognition. Nucleic Acids Res. 23, 2065-2073.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 2065-2073
-
-
Tari, L.1
Secco, A.2
-
132
-
-
0024432345
-
Unusual helical packing in crystals of DNA bearing a mutation hot spot
-
TIMSIT, Y., WESTHOF, E., FUCHS, R. & MORAS, D. (1989). Unusual helical packing in crystals of DNA bearing a mutation hot spot. Nature 341, 459-462.
-
(1989)
Nature
, vol.341
, pp. 459-462
-
-
Timsit, Y.1
Westhof, E.2
Fuchs, R.3
Moras, D.4
-
133
-
-
0025945390
-
Groove-backbone interaction in B-DNA. Implication for DNA condensation and recombination
-
TIMSIT, Y. & MORAS, D. (1991). Groove-backbone interaction in B-DNA. Implication for DNA condensation and recombination, J. Mol. Biol. 221, 919-940.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 919-940
-
-
Timsit, Y.1
Moras, D.2
-
135
-
-
0026657082
-
Crystallization of DNA
-
TIMSIT, Y. & MORAS, D. (1992). Crystallization of DNA. Methods Enzymol. 211, 409-429.
-
(1992)
Methods Enzymol.
, vol.211
, pp. 409-429
-
-
Timsit, Y.1
Moras, D.2
-
136
-
-
0028232140
-
DNA self-fitting: The double helix directs the geometry of its supramolecular assembly
-
TIMSIT, Y. & MORAS, D. (1994). DNA self-fitting: the double helix directs the geometry of its supramolecular assembly. EMBO J. 13, 2737-2746.
-
(1994)
EMBO J.
, vol.13
, pp. 2737-2746
-
-
Timsit, Y.1
Moras, D.2
-
137
-
-
0029119123
-
Self-fitting and self-modifying properties of the B-DNA molecule
-
TIMSIT, Y. & MORAS, D. (1995). Self-fitting and self-modifying properties of the B-DNA molecule, J. Mol. Biol. 251, 629-647.
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 629-647
-
-
Timsit, Y.1
Moras, D.2
-
138
-
-
0022816108
-
n promotes reciprocal exchange and generates unusual recombinant tetrads during yeast meiosis
-
n promotes reciprocal exchange and generates unusual recombinant tetrads during yeast meiosis. Mol. Cell. Biol. 6, 3934-3947.
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3934-3947
-
-
Treco, D.1
Arnheim, N.2
-
139
-
-
0027324176
-
2-Hi' distances in GC-rich part of the duplex d(CCTCAAACTCC).d(GGAGT-TTGAGG) in solution at low temperature: Proton nuclear magnetic resonance investigation
-
2-Hi' distances in GC-rich part of the duplex d(CCTCAAACTCC).d(GGAGT-TTGAGG) in solution at low temperature: proton nuclear magnetic resonance investigation. Biochemistry 32, 6875-6883.
-
(1993)
Biochemistry
, vol.32
, pp. 6875-6883
-
-
Ulyaxov, N.1
Sarma, M.2
Zuhurkin, V.3
Sarma, R.4
-
141
-
-
0024292743
-
Chloroacetaldehyde reacts with Z-DNA
-
VOGT, N., MARROT, L., ROUSSEAU, N., MALFOY, B. & LENG, M. (1988). Chloroacetaldehyde reacts with Z-DNA. J. Mol. Biol. 201, 773-776.
-
(1988)
J. Mol. Biol.
, vol.201
, pp. 773-776
-
-
Vogt, N.1
Marrot, L.2
Rousseau, N.3
Malfoy, B.4
Leng, M.5
-
143
-
-
0022834354
-
Changes in conformation, stability and condensation of DNA by univalent and divalent cations in methanol-water mixtures
-
VOTAVOVA, H., KUCEROVA, D., FELSBERG, J. & SPONAR, J. (1986). Changes in conformation, stability and condensation of DNA by univalent and divalent cations in methanol-water mixtures, J. Biomol. Struct. Dyn. 4, 477-489.
-
(1986)
J. Biomol. Struct. Dyn.
, vol.4
, pp. 477-489
-
-
Votavova, H.1
Kucerova, D.2
Felsberg, J.3
Sponar, J.4
-
144
-
-
0025190946
-
Hypervariable minisatellite DNA is a hot spot for homologous recombination in human cells
-
WAHLS, W., WALLACE, L. & MOORE, P. (1990). Hypervariable minisatellite DNA is a hot spot for homologous recombination in human cells. Cell 60, 95-103.
-
(1990)
Cell
, vol.60
, pp. 95-103
-
-
Wahls, W.1
Wallace, L.2
Moore, P.3
-
145
-
-
0025057566
-
30 promotes reception of information during gene conversion events while stimulating homologous recombination in human cells in culture
-
30 promotes reception of information during gene conversion events while stimulating homologous recombination in human cells in culture. Mol. Cell. Biol. 10, 785-793.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 785-793
-
-
Wahls, W.1
Wallace, L.2
Moore, P.3
-
146
-
-
0026577264
-
Polymerase II promoter activation: Closed complex formation and ATP-driven start site opening
-
WANG, W., CAREY, M. & GRALLA, J. (1992). Polymerase II promoter activation: closed complex formation and ATP-driven start site opening. Science 255, 450-453.
-
(1992)
Science
, vol.255
, pp. 450-453
-
-
Wang, W.1
Carey, M.2
Gralla, J.3
-
147
-
-
0023904316
-
Action at a distance along a DNA
-
WANG, J.-C. & GIAVER, G. (1988). Action at a distance along a DNA. Science 240, 300-304.
-
(1988)
Science
, vol.240
, pp. 300-304
-
-
Wang, J.-C.1
Giaver, G.2
-
148
-
-
0022518195
-
Biochemical topology: Applications to DNA recombination and replication
-
WASSERMAN, S. & COZZARELLI, N. (1986). Biochemical topology: applications to DNA recombination and replication. Science 232, 951-960.
-
(1986)
Science
, vol.232
, pp. 951-960
-
-
Wasserman, S.1
Cozzarelli, N.2
-
149
-
-
0028013525
-
Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations
-
WEISZ, K., SHAFER, R., EGAN, W. & JAMES, T. (1994). Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations. Biochemistry 33, 354-366.
-
(1994)
Biochemistry
, vol.33
, pp. 354-366
-
-
Weisz, K.1
Shafer, R.2
Egan, W.3
James, T.4
-
150
-
-
0025944267
-
DNA probes: Applications of the principles of nucleic acid hybridization
-
WETMUR, J. (1991). DNA probes: applications of the principles of nucleic acid hybridization. Crit, Rev. Biochem. Mol. Biol. 26, 227-259.
-
(1991)
Crit, Rev. Biochem. Mol. Biol.
, vol.26
, pp. 227-259
-
-
Wetmur, J.1
-
152
-
-
0022273023
-
Structure of the 300 a chromatin filament: X-ray diffraction oriented samples
-
WIDOM, J. & KLUG, A. (1985). Structure of the 300 A chromatin filament: X-ray diffraction oriented samples. Cell 43, 307-213.
-
(1985)
Cell
, vol.43
, pp. 307-1213
-
-
Widom, J.1
Klug, A.2
-
153
-
-
0022544946
-
Physicochemical studies of the folding of the 100 Å nucleosome filament into the 300 A filament
-
WIDOM, J. (1986). Physicochemical studies of the folding of the 100 Å nucleosome filament into the 300 A filament. J. Mol. Biol. 190, 411-424.
-
(1986)
J. Mol. Biol.
, vol.190
, pp. 411-424
-
-
Widom, J.1
-
154
-
-
0024489155
-
Toward a unified model of chromatin folding
-
WIDOM, J. (1989). Toward a unified model of chromatin folding. Annu. Rev. Biophys. Chem. 18, 365-395.
-
(1989)
Annu. Rev. Biophys. Chem.
, vol.18
, pp. 365-395
-
-
Widom, J.1
-
155
-
-
0027179019
-
The frequency of two-base tracts in eukaryotic genomes
-
YAGIL, G. (1993). The frequency of two-base tracts in eukaryotic genomes. J. Mol. Evol. 37, 123-130.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 123-130
-
-
Yagil, G.1
-
156
-
-
0024761534
-
In situ nucleoprotein structure at the SV40 major late promoter: Melted and wrapped DNA flank the start site
-
ZHANG, L. & GRALLA, J. (1989). In situ nucleoprotein structure at the SV40 major late promoter: melted and wrapped DNA flank the start site. Genes Dev. 3, 1814-1822.
-
(1989)
Genes Dev.
, vol.3
, pp. 1814-1822
-
-
Zhang, L.1
Gralla, J.2
-
157
-
-
0025647116
-
Eukaryotic topoisomerases recognize nucleic acid topology by preferentially interacting with DNA crossovers
-
ZECHIEDRICH, L. & OSHEROFF, N. (1990). Eukaryotic topoisomerases recognize nucleic acid topology by preferentially interacting with DNA crossovers. EMBO J. 9, 4555-4562.
-
(1990)
EMBO J.
, vol.9
, pp. 4555-4562
-
-
Zechiedrich, L.1
Osheroff, N.2
-
158
-
-
0027496418
-
Macromolecular crowding effects on macromolecular interactions : Some implications for genome structure and functions
-
ZIMMERMAN, S. (1993). Macromolecular crowding effects on macromolecular interactions : some implications for genome structure and functions. Biochim. Biophys. Acta 1216, 175-185.
-
(1993)
Biochim. Biophys. Acta
, vol.1216
, pp. 175-185
-
-
Zimmerman, S.1
-
159
-
-
0022423258
-
Macromolecular crowding accelerates the cohesion of DNA fragments with complementary termini
-
ZIMMERMAN, S. & HARRISON, B. (1985). Macromolecular crowding accelerates the cohesion of DNA fragments with complementary termini. Nucleic Acids Res. 13, 2241-2249.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 2241-2249
-
-
Zimmerman, S.1
Harrison, B.2
-
160
-
-
0000225096
-
Macromolecular crowding increases binding of DNA polymerase to DNA: An adaptative effect
-
ZIMMERMAN, S. & HARRISON, B. (1985). Macromolecular crowding increases binding of DNA polymerase to DNA: an adaptative effect. Proc. Natl. Acad. Sci. USA 84, 1871-1875.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 1871-1875
-
-
Zimmerman, S.1
Harrison, B.2
|