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Volumn 6, Issue 3, 1996, Pages 425-437

Molecular phylogeny of eastern Pacific sea cucumbers (Echinodermata: Holothuroidea) based on mitochondrial DNA sequence

Author keywords

[No Author keywords available]

Indexed keywords

ASTIGMATA; CUCUMARIIDAE; CUCUMIS SATIVUS; CUCURBITACEAE; ECHINODERMATA; HOLOTHUROIDEA; PSEUDOCNUS;

EID: 0030339735     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1996.0091     Document Type: Article
Times cited : (111)

References (45)
  • 1
    • 0025881012 scopus 로고
    • Strand-specific nucleotide composition bias in echinoderm and verterbrate mitochondrial genomes
    • Asakawa, S., Kumasawa, Y., Araki, T., Himeno, H., Miura, K., and Watanabe, K. (1991). Strand-specific nucleotide composition bias in echinoderm and verterbrate mitochondrial genomes. J. Mol. Evol. 32: 511-520.
    • (1991) J. Mol. Evol. , vol.32 , pp. 511-520
    • Asakawa, S.1    Kumasawa, Y.2    Araki, T.3    Himeno, H.4    Miura, K.5    Watanabe, K.6
  • 3
    • 0024379859 scopus 로고
    • Simultaneous editing of multiple nucleic acid and protein sequences with ESEE
    • Cabot, E. L., and Beckenbach, A. T. (1989). Simultaneous editing of multiple nucleic acid and protein sequences with ESEE. Comput. Appl. Biosci. 5: 233-234.
    • (1989) Comput. Appl. Biosci. , vol.5 , pp. 233-234
    • Cabot, E.L.1    Beckenbach, A.T.2
  • 4
    • 0024962173 scopus 로고
    • The complete nucleotide sequence, gene organization, and genetic code of the mitochondrial genome of Paracentrotus lividus
    • Cantatore, P., Roberti, M., Renaldi, G., Gadaleta, M., and Saccone, C. (1989). The complete nucleotide sequence, gene organization, and genetic code of the mitochondrial genome of Paracentrotus lividus. J. Biol. Chem. 264: 10965-10975.
    • (1989) J. Biol. Chem. , vol.264 , pp. 10965-10975
    • Cantatore, P.1    Roberti, M.2    Renaldi, G.3    Gadaleta, M.4    Saccone, C.5
  • 5
    • 0039801820 scopus 로고
    • No. 15-Echinoderms from Puget Sound: Observations made on the echinoderms collected by the parties from Columbia University, in Puget Sound in 1896 and 1897
    • Clark, H. L. (1901). No. 15-Echinoderms from Puget Sound: Observations made on the echinoderms collected by the parties from Columbia University, in Puget Sound in 1896 and 1897. Proc. Boston Soc. 29: 323-337.
    • (1901) Proc. Boston Soc. , vol.29 , pp. 323-337
    • Clark, H.L.1
  • 6
    • 0040394298 scopus 로고
    • Some holothurians from British Columbia
    • Clark, H. L. (1924). Some holothurians from British Columbia. Can. Field Nat. 38: 54-57.
    • (1924) Can. Field Nat. , vol.38 , pp. 54-57
    • Clark, H.L.1
  • 7
    • 0022271984 scopus 로고
    • The mitochondrial DNA molecule of Drosophila yakuba: Nucleotide sequence, gene organization and genetic code
    • Clary, D. O., and Wolstenholme, D. R. (1985). The mitochondrial DNA molecule of Drosophila yakuba: nucleotide sequence, gene organization and genetic code. J. Mol. Evol. 22: 252-271.
    • (1985) J. Mol. Evol. , vol.22 , pp. 252-271
    • Clary, D.O.1    Wolstenholme, D.R.2
  • 9
    • 0040394297 scopus 로고
    • New holothurians from the western coast of North America and some remarks on the Genus Caudina
    • Deichmann, E. (1938). New holothurians from the western coast of North America and some remarks on the Genus Caudina. Proc. N. Eng. Zool. Club 16: 103-115.
    • (1938) Proc. N. Eng. Zool. Club , vol.16 , pp. 103-115
    • Deichmann, E.1
  • 10
    • 0027616542 scopus 로고
    • A phylogeny of new world Deltocephalus-like Leafhopper genera based on mitochondrial 16S ribosomal DNA sequences
    • Fang, Q., Black, W. C. IV, Blocker, H. D., and Whitcomb, R. F. (1993). A phylogeny of new world Deltocephalus-like Leafhopper genera based on mitochondrial 16S ribosomal DNA sequences. Mol. Phyl. Evol. 2: 119-131.
    • (1993) Mol. Phyl. Evol. , vol.2 , pp. 119-131
    • Fang, Q.1    Black W.C. IV2    Blocker, H.D.3    Whitcomb, R.F.4
  • 11
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequence: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequence: A maximum likelihood approach. J. Molec. Evol. 17: 368-376.
    • (1981) J. Molec. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 13
    • 0002017604 scopus 로고
    • The skeletal morphology, systematics and evolutionary history of Holothurians
    • Gilliland, P. M. (1992). The skeletal morphology, systematics and evolutionary history of Holothurians. Spec. Papers Palaeontol. 47: 1-147.
    • (1992) Spec. Papers Palaeontol. , vol.47 , pp. 1-147
    • Gilliland, P.M.1
  • 14
    • 0022633609 scopus 로고
    • Dideoxy sequencing method using denatured plasmid templates
    • Hattori, M., and Sakaki, Y. (1986). Dideoxy sequencing method using denatured plasmid templates. Anal. Biochem. 152: 232-238.
    • (1986) Anal. Biochem. , vol.152 , pp. 232-238
    • Hattori, M.1    Sakaki, Y.2
  • 15
    • 0026605537 scopus 로고
    • CLUSTALV: Improved software for multiple sequence alignment
    • Higgins, E. G., Bleasby, A. J., and Fuchs, R. (1992). CLUSTALV: Improved software for multiple sequence alignment. Comput. Appl. Biosc. 8: 189-191.
    • (1992) Comput. Appl. Biosc. , vol.8 , pp. 189-191
    • Higgins, E.G.1    Bleasby, A.J.2    Fuchs, R.3
  • 17
    • 0040988348 scopus 로고
    • FSP Mathematisierung, Universitat Bielefeld, Bielefeld, Germany
    • Huson, D., and Wetzel, R. (1994). "Splitstree." FSP Mathematisierung, Universitat Bielefeld, Bielefeld, Germany.
    • (1994) Splitstree
    • Huson, D.1    Wetzel, R.2
  • 18
    • 0024292930 scopus 로고
    • Nucleotide sequence and gene organization of sea urchin mitochondrial DNA
    • Jacobs, H. T., Elliott, D. J., Math, V. B., and Farquharson, A. (1988). Nucleotide sequence and gene organization of sea urchin mitochondrial DNA. J. Mol. Biol. 202: 185-217.
    • (1988) J. Mol. Biol. , vol.202 , pp. 185-217
    • Jacobs, H.T.1    Elliott, D.J.2    Math, V.B.3    Farquharson, A.4
  • 19
    • 0028308288 scopus 로고
    • Analysis of directional mutation pressure and nucleotide content in mitochondrial cytochrome b genes
    • Jermiin, L. S., Graur, D., Lowe, R. M., and Crozier, R. H. (1994a). Analysis of directional mutation pressure and nucleotide content in mitochondrial cytochrome b genes. J. Molec. Evol. 39: 160-173.
    • (1994) J. Molec. Evol. , vol.39 , pp. 160-173
    • Jermiin, L.S.1    Graur, D.2    Lowe, R.M.3    Crozier, R.H.4
  • 20
    • 0029000323 scopus 로고
    • Strand-specific directional mutation pressure in metazoan mitochondrial DNA
    • Jermiin, L. S., Graur, D., and Crozier, R. H. (1994b). Strand-specific directional mutation pressure in metazoan mitochondrial DNA. Mol. Biol. Evol. 12: 558-563.
    • (1994) Mol. Biol. Evol. , vol.12 , pp. 558-563
    • Jermiin, L.S.1    Graur, D.2    Crozier, R.H.3
  • 21
    • 0039209782 scopus 로고
    • Cucumaria pallida, a new species of sea cucumber from the northeast Pacific ocean (Echinodermata: Holothuroidea)
    • Kirkendale, L., and Lambert, P. (1995). Cucumaria pallida, a new species of sea cucumber from the northeast Pacific ocean (Echinodermata: Holothuroidea). Can J. Zool. 73: 542-551.
    • (1995) Can J. Zool. , vol.73 , pp. 542-551
    • Kirkendale, L.1    Lambert, P.2
  • 22
    • 0024307824 scopus 로고
    • Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino, H., and Hasegawa, M. (1989). Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29: 170-179.
    • (1989) J. Mol. Evol. , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 25
    • 0002817363 scopus 로고
    • Geographic variation of calcareous ossicles and the identification of three species of eastern Pacific sea cucumbers (Echinodermata: Holothuroidea)
    • (B. F. Keegan and B. D. S. O'Connor, Eds.), Balkema, Rotterdam
    • Lambert, P. (1985). Geographic variation of calcareous ossicles and the identification of three species of eastern Pacific sea cucumbers (Echinodermata: Holothuroidea). In "Echinodermata: Proceedings of the Fifth International Echinoderm Conference, Galway" (B. F. Keegan and B. D. S. O'Connor, Eds.), pp. 437-443, Balkema, Rotterdam.
    • (1985) Echinodermata: Proceedings of the Fifth International Echinoderm Conference, Galway , pp. 437-443
    • Lambert, P.1
  • 26
    • 0040988329 scopus 로고
    • A new combination and synonymy for two subspecies of Cucumaria fisheri Wells (Echinodermata: Holothuroidea)
    • Lambert, P. (1990). A new combination and synonymy for two subspecies of Cucumaria fisheri Wells (Echinodermata: Holothuroidea). Proc. Biol. Soc. Wash. 103: 913-921.
    • (1990) Proc. Biol. Soc. Wash. , vol.103 , pp. 913-921
    • Lambert, P.1
  • 27
    • 0028361182 scopus 로고
    • Recovering evolutionary trees under a more realistic model of sequence evolution
    • Lockhart, P. J., Steel, M. A., Hendy, M. D., and Penny, D. (1994). Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11(4): 605-612.
    • (1994) Mol. Biol. Evol. , vol.11 , Issue.4 , pp. 605-612
    • Lockhart, P.J.1    Steel, M.A.2    Hendy, M.D.3    Penny, D.4
  • 28
    • 0025982062 scopus 로고
    • Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products
    • Marchuk, D., Drumm, M., Saulino, A., and Collins, F. S. (1991). Construction of T-vectors, a rapid and general system for direct cloning of unmodified PCR products. Nucleic Acids Res. 19: 1154.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1154
    • Marchuk, D.1    Drumm, M.2    Saulino, A.3    Collins, F.S.4
  • 29
    • 0026574207 scopus 로고
    • Recent evidence for evolution of the genetic code
    • Osawa, S., Jukes, T. H., Watanabe, K., and Muto, A. (1992). Recent evidence for evolution of the genetic code. Microbiol. Rev. 56: 229-264.
    • (1992) Microbiol. Rev. , vol.56 , pp. 229-264
    • Osawa, S.1    Jukes, T.H.2    Watanabe, K.3    Muto, A.4
  • 30
    • 0042550312 scopus 로고
    • Phylogeny and evolution of holothuroids
    • (R. C. Moore, Ed.), pp. 641-646, Geol. Soc. of America & Univ. of Kansas Press, Lawrence, KA
    • Pawson, D. L. (1966). Phylogeny and evolution of holothuroids. In "Treatise on Invertebrate Paleontology, Part U, Echinodermata 3, Vol. 2" (R. C. Moore, Ed.), pp. 641-646, Geol. Soc. of America & Univ. of Kansas Press, Lawrence, KA.
    • (1966) Treatise on Invertebrate Paleontology, Part U, Echinodermata 3 , vol.2
    • Pawson, D.L.1
  • 31
    • 0039209759 scopus 로고
    • Geographical variation in morphological and electrophoretic characters in the holothurian C. curata
    • Rutherford, J. C. (1977). Geographical variation in morphological and electrophoretic characters in the holothurian C. curata. Mar. Biol. 43: 165-174.
    • (1977) Mar. Biol. , vol.43 , pp. 165-174
    • Rutherford, J.C.1
  • 32
    • 0023375195 scopus 로고
    • The neighbor joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987). The neighbor joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-125.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-1125
    • Saitou, N.1    Nei, M.2
  • 34
    • 0001632160 scopus 로고
    • Beiträge zur anatomie und systematik der holothurien
    • Selenka, E. (1867). Beiträge zur anatomie und Systematik der holothurien. Z. Wiss. Zool. 17: 291-374.
    • (1867) Z. Wiss. Zool. , vol.17 , pp. 291-374
    • Selenka, E.1
  • 35
    • 0008080672 scopus 로고
    • Holothurien
    • Zweite theil wissenschaftliche resultate, erster band. Weisbeden, Leipzig, Deutschland
    • Semper, C. (1868). Holothurien. In "Reisen im archípel der Phillippinen." Zweite theil wissenschaftliche resultate, erster band. Weisbeden, Leipzig, Deutschland.
    • (1868) Reisen Im Archípel der Phillippinen
    • Semper, C.1
  • 36
    • 0027301017 scopus 로고
    • The phylogeny of echinoderm classes based on mitochondrial gene rearrangements
    • Smith, M. J., Arndt, A., Gorski, S., and Fajber, E. (1993). The phylogeny of echinoderm classes based on mitochondrial gene rearrangements. J. Mol. Evol. 36: 545-554.
    • (1993) J. Mol. Evol. , vol.36 , pp. 545-554
    • Smith, M.J.1    Arndt, A.2    Gorski, S.3    Fajber, E.4
  • 38
    • 0000580787 scopus 로고
    • Crustacea and Echinodermata of the Pacific shores of North America
    • Stimpson, W. (1857). Crustacea and Echinodermata of the Pacific shores of North America. Boston J. Nat. Hist. 6: 524-531.
    • (1857) Boston J. Nat. Hist. , vol.6 , pp. 524-531
    • Stimpson, W.1
  • 39
    • 0001602946 scopus 로고
    • Descriptions of new species of marine invertebrata from Puget Sound
    • collected by the Naturalists of the North-west Boundary Commission, A. H. Campbell, Esq., Commissioner
    • Stimpson, W. (1864). Descriptions of new species of marine invertebrata from Puget Sound, collected by the Naturalists of the North-west Boundary Commission, A. H. Campbell, Esq., Commissioner. Proc. Acad. Nat. Sci. Philadelphia 16: 153-161.
    • (1864) Proc. Acad. Nat. Sci. Philadelphia , vol.16 , pp. 153-161
    • Stimpson, W.1
  • 40
    • 3643052747 scopus 로고
    • On the genetic basis of variation and heterogeneity of DNA base composition
    • Sueoka, N. (1962). On the genetic basis of variation and heterogeneity of DNA base composition. Proc. Nat. Acad. Sci. USA 48: 582-592.
    • (1962) Proc. Nat. Acad. Sci. USA , vol.48 , pp. 582-592
    • Sueoka, N.1
  • 42
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura, K., and Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526.
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 44
    • 0040394272 scopus 로고
    • Bemerkungen uber die holothurien-familie Cucumariidae (Ordnung Denrochirota) 3. Teil die gattung Pseudocnus Panning 1949
    • von Panning, A. (1962). Bemerkungen uber die holothurien-familie Cucumariidae (Ordnung Denrochirota) 3. Teil die gattung Pseudocnus Panning 1949. Mitt Hamburg Zool. Mus. Inst. 60: 57-60.
    • (1962) Mitt Hamburg Zool. Mus. Inst. , vol.60 , pp. 57-60
    • Von Panning, A.1
  • 45
    • 84919723761 scopus 로고
    • IV. New species of Cucumaria from Monterey Bay, California
    • Wells, H. 1924. IV. New species of Cucumaria from Monterey Bay, California. Ann. Mag. Nat. Hist. Ser. 9 14: 113-121.
    • (1924) Ann. Mag. Nat. Hist. Ser. 9 , vol.14 , pp. 113-121
    • Wells, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.