Genome rearrangements of rotaviruses

Archives of Virology, Supplement

Volumn 1996, Issue 12, 1996, Pages 37-51

  Desselberger, U ^a  

^a ADDENBROOKE S HOSPITAL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

ANIMAL; GENE REARRANGEMENT; GENETICS; HUMAN; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; REOVIRUS; REVIEW; ROTAVIRUS; VIRUS GENOME;

ANIMALS; BASE SEQUENCE; EVOLUTION, MOLECULAR; GENE REARRANGEMENT; GENOME, VIRAL; HUMANS; MOLECULAR SEQUENCE DATA; REOVIRIDAE; RNA, VIRAL; ROTAVIRUS;

EID: 0030331724     PISSN: 09391983     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-3-7091-6553-9_5     Document Type: Article

References (54)

1. Albert MJ (1985) Detection of human rotaviruses with a "super-short" RNA pattern. Acta Paediatr Scand 74: 975-976
2. Allen AM, Desselberger U (1985) Reassortment of human rotaviruses carrying rearranged genomes with bovine rotavirus. J Gen Virol 66: 2703-2714
3. Ballard A, McCrae MA, Desselberger U (1992) Nucleotide sequences of normal and rearranged RNA segments 10 of human rotaviruses. J Gen Virol 73: 633-638
4. Bellinzoni RC, Mattion NM, Burrone O, Gonzalez A, La Torre JL, Scodeller EA (1987) Isolation of group A swine rotaviruses displaying atypical electropherotypes. J Clin Microbiol 25: 952-954
5. Besselaar TG, Rosenblatt A, Kidd AH (1986) Atypical rotavirus from South African neonates. Arch Virol 87: 327-330
6. Biryahwaho B, Hundley F, Desselberger U (1987) Bovine rotavirus with rearranged genome reassorts with human rotavirus. Arch Virol 96: 257-264
7. Clapp LL, Patton JT (1991) Rotavirus morphogenesis: domains in the major inner capsid protein essential for binding to single-shelled particles and for trimerization. Virology 180: 697-708
8. Clarke IN, McCrae MA (1981) A rapid and sensitive method for analysing the genome profiles of field isolates of rotaviruses. J Virol Methods 2: 203-209
9. Desselberger U (1989) Molecular epidemiology of rotaviruses. In: Farthing MJG (ed) Viruses and the Gut. Swan Press, London, pp 55-59
10. Desselberger U (1996) Genome rearrangements of rotaviruses. Adv Virus Res 46: 69-95
11. Desselberger U, Hung T, Follett EAC (1986) Genome analysis of human rotaviruses by oligonucleotide mapping of isolated RNA segments. Virus Res 4: 357-368
12. Desselberger U, McCrae MA (1994) The rotavirus genome. In: Ramig RF (ed) Rotaviruses. Curr Top Microbiol Immunol 185. Springer, Berlin, pp 31-66
13. Dolan KT, Twist EM, Horton-Slight P, Forrer C, Bell LM, Plotkin SA, Clark HF (1985) Epidemiology of rotavirus electropherotypes determined by a simplified diagnostic technique with RNA analysis. J Clin Microbiol 21: 753-758
14. Domingo E, Martinez-Salas E, Sobrino F, De la Torre JL, Portela A, Ortin J, Lopez-Galindez C, Perez-Brena P, Villanueva M, Najera R, VandePol S, Steinhauer D, dePolo N, Holland J (1985) The quasispecies (extremely heterogeneous) nature of viral RNA genome populations: biological relevance - a review. Gene 40: 1-8
15. Eaton BT, Gould AR (1987) Isolation and characterization of orbivirus genotypic variants. Virus Res 6: 363-382
16. Eiden J, Losonski GA, Johnson J, Yolken R (1985) Rotavirus RNA variation during chronic infection of immunocompromized children. Pediatr Infect Dis 4: 632-637
17. Estes MK (1996) Rotaviruses and their Replication. In: Fields BN, Knipe D, Howley PM, Chanock RM, Melnick JL, Monath TP, Roizman B, Straus SE (eds) Fields Virology, 3rd edn. Lippincott-Raven, Philadelphia, pp 1625-1655
18. Gallegos CO, Patton JT (1989) Characterization of rotavirus intermediates: A model for the assembly of single-shelled particles. Virology 172: 616-627
19. Gault-Frere E, Cassel-Beraud AM, Garbarg-Chenon A (1995) Study of a human group A rotavirus with rearranged RNA segments isolated from an immunodeficient child: Preliminary results. Fifth International Symposium on dsRNA Viruses, Djerba, Abstract P1
20. Graham A, Kudesia G, Allen AM, Desselberger U (1987) Reassortment of human rotavirus possessing genome rearrangements with bovine rotavirus: Evidence for host cell selection. J Gen Virol 68: 115-122
21. Gonzalez SA, Mattion NM, Bellinzoni R, Burrone OR (1989) Structure of rearranged genome segment 11 in two different rotavirus strains generated by a similar mechanism. J Gen Virol 70: 1329-1336
22. Gorziglia M, Nishikawa K, Fukuhara N (1989) Evidence of duplication and deletion in super short segment 11 of rabbit rotavirus Alabama strain. Virology 170: 587-590
23. Holland JJ (1984) Continuum of change in RNA virus genomes. In: Notkins AL, Oldstone MBA (eds) Concepts in Viral Pathogenesis. Springer, New York, pp 137-143
24. Holland JJ, Kennedy SIT, Semler BT, Jones CL, Roux L, Grabau EA (1980) Defective interfering RNA viruses and the host-cell response. In: Fraenkel-Conrat H, Wagner RR (eds) Comprehensive Virology 16. Plenum Press, New York, pp 137-192
25. Holland J, Spindler K, Horodyski F, Grabau E, Nichol S, Vandepol S (1982) Rapid evolution of RNA genomes. Science 215: 1577-1585
26. Hua J, Patton JT (1994) The carboxyl-half of the rotavirus nonstructural protein NS53 (NSP1) is not required for virus replication. Virology 198: 567-576
27. Hundley F, Biryahwaho B, Gow M, Desselberger U (1985) Genome rearrangements of bovine rotavirus after serial passage at high multiplicity of infection. Virology 143: 88-103
28. Hundley F, McIntyre M, Clark B, Beards G, Wood D, Chrystie I, Desselberger U (1987) Heterogeneity of genome rearrangements in rotaviruses isolated from a chronically infected, immunodeficient child. J Virol 61: 3365-3372
29. Kapikian AL, Chanock RM (1996) Rotaviruses In: Fields BN, Knipe D, Howley PM, Chanock RM, Melnick JL, Monath TP, Roizmn B, Straus SE (eds) Fields Virology, 3rd edn. Lippincott-Raven, Philadelphia, pp 1657-1708
30. Kirkegaard K, Baltimore D (1986) The mechanism of RNA recombination inpoliovirus. Cell 47: 433-443
31. Lai MMC (1992) RNA recombination in animal and plant viruses. Microbiol Rev 56: 61-79
32. Matsui SM, Mackow ER, Matsuno S, Paul PS and Greenberg HB (1990) Sequence analysis of gene 11 equivalents from "short" and "supershort" strains of rotavirus. J Virol 64: 120-124
33. Matsuno S, Hasegawa A, Mukoyama A, Inouye S (1985) A candidate for a new serotype of human rotavirus. J Virol 54: 623-624
34. Mattion N, Gonzalez SA, Burrone O, Bellinzoni R, La Torre JL, Scodeller EA (1988) Rearrangement of genomic segment 11 in two swine rotavirus strains. J Gen Virol 69: 695-698
35. McIntyre M, Rosenbaum V, Rappold W, Desselberger M, Wood D, Desselberger U (1987) Biophysical characterization of rotavirus particles containing rearranged genomes. J Gen Virol 68: 2961-2966
36. Mendez E, Arias CF, Lopez S (1992) Genomic rearrangement in human rotavirus strain Wa: analysis of rearranged RNA segment 7. Arch Virol 125: 331-338
37. Mindich L, Qiao X, Onodera S, Gottlieb P, Strassman J (1992) Heterologous recombination in the double-stranded RNA bacteriophage phi 6. J Virol 66: 2605-2610
38. Murphy FA, Fauquet CM, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo MA, Summers MD (eds) (1995) Virus Taxonomy. Springer Verlag, Wien New York, pp 219-222
39. Offit PA (1994) Rotaviruses: Immunological determinants of protection against infection and disease. Adv Virus Res 44: 161-232
40. Onodera S, Qiao X, Gottlieb P, Strassman J, Frilander M, Mindich L (1993) RNA structure and heterologous recombination in the double-stranded RNA phage phi 6. J Virol 67: 4914-4922
41. Palese P (1984) Reassortment continuum. In: Notkins AL, Oldstone MBA (eds) Concepts in Viral Pathogenesis. Springer, New York, pp 144-151
42. Paul PS, Young SL, Woode GN, Zheng S, Greenberg HB, Matsui S, Schwartz KJ, Hill HT (1988) Isolation of a bovine rotavirus with a "super-short" RNA electrophoretic pattern from a calf with diarrhoea. J Clin Microbiol 26: 2139-2143
43. Pedley S, Hundley F, Chrystie I, McCrae MA, Desselberger U (1984) The genomes of rotaviruses isolated from chronically infected immunodeficient children. J Gen Virol 65: 1141-1150
44. Pocock DH (1987) Isolation and characterization of two group A rotaviruses with unusual genome profiles. J Gen Virol 68: 653-660
45. Ramig RF, Samal SK, McConnell S (1985) Genome RNAs of virulent and attenuated strains of bluetongue virus serotypes 10, 11, 13, and 17. In: Barger TL, Yochim MM (eds) Bluetongue and Related Orbiviruses. Alan R Liss, New York, pp 389-396
46. Rennels MB, Glass RI, Dennehy PH, Bernstein DI, Pichichero ME, Zito ET, Mack ME, Davidson BL, Kapikian AZ (1996) Safety and efficacy of high dose rhesus-human reassortant rotavirus vaccines. Report of the national multicenter trial. Pediatrics 97: 7-13
47. Sabara M, Deregt D, Babiuk LA, Misra V (1982) Genetic heterogeneity within individual bovine rotavirus isolates. J Virol 44: 813-822
48. Scott GE, Tarlow D, McCrae MA (1989) Detailed structural analysis of a genome rearrangement in bovine rotavirus. Virus Res 14: 119-128
49. Shen S, Bai ZS (1990) Genome variation and rearrangements of a lamb rotavirus after 96 passages in cell culture at high m.o.i. Chinese J Epidemiol 11: 110-114
50. Shen S, Burke B, Desselberger U (1994) Rearrangements of the VP6 gene of a group A rotavirus in combination with a point mutation affecting trimer stability. J Virol 68: 1682-1688
51. Tanaka TN, Conner ME, Graham DY, Estes MK (1988) Molecular characterization of three rabbit rotaviruses strains. Arch Virol 98: 253-265
52. Taniguchi K, Kojima K, Kobajashi N, Urasawa T and Urasawa S (1994) Properties of a bovine rotavirus variant with gene 5 having a deletion of 500 base parts. Abstract, Twenty-Eighth Joint Working Conference on Viral Diseases, Japan-US Cooperative Medical Science Program, Tokyo, Japan
53. Thouless ME, DiGiacomo RF, Neuman DS (1986) Isolation of two lapine rotaviruses: characterization of their subgroup, serotype and RNA electropherotypes. Arch Virol 89: 161-170
54. Tian Y, Tarlow O, Ballard A, Desselberger U, McCrae MA (1993) Genomic concatermerization/deletion in rotaviruses: A new mechanism for generating rapid genetic change of potential epidemiological importance. J Virol 67: 6625-6632