Genetic stability of a porcine rotavirus RNA segment during repeated plaque isolation

Virology

Volumn 225, Issue 1, 1996, Pages 181-190

  Blackhall, J ^a,b   Fuentes, A ^a   Magnusson, G ^a  

^a UPPSALA UNIVERSITY   (Sweden)

^b Centro de Virologia Animal   (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; GENETIC STABILITY; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL; RNA SEQUENCE; ROTAVIRUS; SWINE; VIRUS MUTATION;

ANIMALIA; PORCINE ROTAVIRUS; ROTAVIRUS; ROTAVIRUS A; SIMIAE; SIMIAN ROTAVIRUS; SUIDAE; SUS SCROFA;

EID: 0030296324     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.0586     Document Type: Article

References (36)

1. Adler, B. K., and Hajduk, S. L. (1994). Mechanisms and origins of RNA editing. Curr. Opin. Genet. Dev. 4, 316-322.
2. Arias, C. F., Lopez, S., and Espejo, R. T. (1986). Heterogeneity in base sequence among different DNA clones containing equivalent sequences of rotavirus double-stranded RNA. J. Virol. 57, 1207-1209.
3. Ballard, A., McCrae, M. A., and Desselberger, U. (1992). Nucleotide sequences of normal and rearranged RNA segments 10 of human rotaviruses. J. Gen. Virol. 73, 633-638.
4. Bern, C., and Glass, R. I. (1994). Impact of diarrheal diseases worldwide. In "Viral Infections of the Gastrointestinal Tract" (A. Z. Kapikian, Ed.), pp. 1-26. Dekker, New York.
5. Blackhall, J., Bellinzoni, R., Mattion, N., Estes, M. K., La Torre, J. L., and Magnusson, G. (1992). A bovine rotavirus serotype 1: Serologic characterization of the virus and nucleotide sequence determination of the structural glycoprotein VP7 gene. Virology 189, 833-837.
6. Britten, R. J. (1986). Rates of DNA sequence evolution differ between taxonomic groups. Science 231, 1393-1398.
7. Cattaneo, R. (1994). Biased (A → I) hypermutation of animal RNA virus genomes. Curr. Opin. Genet. Dev. 4, 895-900.
8. Chao, L. (1990). Fitness of RNA virus decreased by Muller's ratchet. Nature (London) 348, 454-455.
9. Desselberger, U., and McCrae, M. A. (1994). The rotavirus genome. Curr. Top. Microbiol. Immunol. 185, 31-66.
10. Duarte, E. A., Novella, I. S., Ledesma, S., Clarke, D. K., Moya, A., Elena, S. F., Domingo, E., and Holland, J. J. (1994). Subclonal components of consensus fitness in an RNA virus clone. J. Virol. 68, 4295-4301.
11. Estes, M. K., and Cohen, J. (1989). Rotavirus gene structure and function. Microbiol. Rev. 53, 410-449.
12. Flores, J., Sears, J., Green, K. Y., Perez-Schael, I., Morantes, A., Daoud, G., Gorziglia, M., Hoshino, Y., Chanock, R. M., and Kapikian, A. Z. (1988). Genetic stability of rotavirus recovered from asymptomatic neonatal infections. J. Virol. 62, 4778-4781.
13. Gombold, J. L., and Ramig, R. F. (1994). Genetics of the rotaviruses. Curr. Top. Microbiol. Immunol. 185, 129-177.
14. Gonzalez, S. A., and Burrone, O. R. (1991). Rotavirus NS26 is modified by addition of single O-linked residues of N-acetylglucosamine. Virology 182, 8-16.
15. Gonzalez, S. A., Mattion, N. M., Bellinzoni, R., and Burrone, O. R. (1989). Structure of rearranged segment 11 in two different rotavirus strains generated by similar mechanisms. J. Gen. Virol. 70, 1329-1336.
16. Gorziglia, M., Nishikawa, K., and Fukuhara, N. (1989). Evidence of duplication in super short segment 11 of rabbit rotavirus Alabama strain. Virology 170, 587-590.
17. Hajjar, A. M., and Linial, M. L. (1995). Modification of retroviral RNA by double-stranded RNA adenosine deaminase. J. Virol. 69, 5878-5882.
18. Kornberg, A., and Baker, T. A. (1991). DNA Replication. Freeman, New York.
19. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London) 227, 680-685.
20. Lopez, S., and Arias, C. F. (1993). Protein NS26 is highly conserved among porcine rotavirus strains. Nucleic Acids Res. 21, 1042.
21. Matsui, S. M., Mackow, E. R., Matsuno, S., Paul, P. S., and Greenberg, H. B. (1990). Sequence analysis of gene 11 equivalents from "short" and "super short" strains of rotavirus. J. Virol. 64, 120-124.
22. Mattion, N. M., Bellinzoni, R. C., Blackhall, J. O., Estes, M. K., Gonzalez, S., La Torre, J. L., and Scodeller, E. A. (1990). Genome rearrangements in porcine rotaviruses: Biochemical and biological comparisons between a supershort strain and its standard counterpart. J. Gen. Virol. 71, 355-362.
23. Mattion, N. M., Bellinzoni, R. C., Blackhall, J. O., La Torre, J. L., and Scodeller, E. A. (1989). Antigenic characterization of swine rotaviruses in Argentina. J. Clin. Microbiol. 27, 795-798.
24. Mattion, N. M., Mitchell, D. B., Both, G. W., and Estes, M. K. (1991). Expression of rotavirus proteins encoded by alternative open reading frames of genome segment 11. Virology 181, 295-304.
25. Mitchell, D. B., and Both, G. W. (1988). Simian rotavirus SA11 segment 11 contains overlapping reading frames. Nucleic Acids Res. 16, 6244.
26. Muller, H. J. (1964). The relation of recombination to mutational advance. Mutat. Res. 1, 2-9.
27. O'Farrel, P. Z, Goodman, H. M., and O'Farrel, P. H. (1977). High resolution two-dimensional electrophoresis of basic as well as acidic proteins. Cell 12, 1133-1142.
28. Scott, G. E., Tarlow, O., and McCrae, M. A. (1989). Detailed structural analysis of a genome rearrangement in bovine rotavirus. Virus Res. 14, 119-128.
29. Steinhauer, D. A., Domingo, E., and Holland, J. J. (1992). Lack of evidence for proofreading mechanisms associated with an RNA virus polymerase. Gene 122, 281-288.
30. Steinhauer, D. A., and Holland, J. J. (1986). Direct method for quantitation of extreme polymerase error frequencies at selected single base sites in viral RNA. J. Virol. 57, 219-228.
31. Steinhauer, D. A., and Holland, J. J. (1987). Rapid evolution of RNA viruses. Annu. Rev. Microbiol. 41, 409-433.
32. Theil, K. W., and McCloskey, C. M. (1988). Partial characterization of a bovine group A rotavirus with a short genome electropherotype. J. Clin. Microbiol. 26, 1094-1099.
33. Tian, Y., Tarlow, O., Ballard, A., Desselberger, U., and McCrae, M. A. (1993). Genomic concatemerization/deletion in rotaviruses: A new mechanism for generating rapid genetic change of potential epidemiological importance. J. Virol. 67, 6625-6632.
34. Ward, C. D., and Flanegan, J. B. (1992). Determination of the poliovirus RNA polymerase error frequency at eight sites in the viral genome. J. Virol. 66, 3784-3793.
35. Welch, S. K., Crawford, S. E., and Estes, M. K. (1989). Rotavirus SA11 genome segment 11 protein is a nonstructural phosphoprotein. J. Virol. 63, 3974-3982.
36. Wilde, J., Eiden, J., and Yolken, R. (1990). Removal of inhibitory substances from human fecal specimens for detection of group A rotaviruses by reverse transcriptase and polymerase chain reactions. J. Clin. Microbiol. 28, 1300-1307.