Swine cytosolic malic enzyme: cDNA cloning, sequencing, and localization

Mammalian Genome

Volumn 7, Issue 11, 1996, Pages 815-821

  Nunes, M ^a   Lahbib Mansais, Y ^a   Geffrotin, C ^b   Yerle, M ^a   Vaiman, M ^b   Renard, C ^a  

^a CEMAGREF   (France)

^b DIF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

MAMMALIA; SUS SCROFA;

COMPLEMENTARY DNA; MALATE DEHYDROGENASE; MALATE DEHYDROGENASE (DECARBOXYLATING); PRIMER DNA;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; BIOSYNTHESIS; CHEMISTRY; CHROMOSOME MAP; COMPARATIVE STUDY; CYTOSOL; DNA PROBE; ENZYMOLOGY; FEMALE; GENETICS; HUMAN; MALE; MITOCHONDRION; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; RAT; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RESTRICTION MAPPING; SEQUENCE HOMOLOGY; SWINE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; CLONING, MOLECULAR; CYTOSOL; DNA PRIMERS; DNA PROBES; DNA, COMPLEMENTARY; FEMALE; HUMANS; MALATE DEHYDROGENASE; MALE; MITOCHONDRIA; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RATS; RESTRICTION MAPPING; SEQUENCE HOMOLOGY, AMINO ACID; SWINE;

EID: 0030278022     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900243     Document Type: Article

References (42)

1. Bagchi, S., Wise, L.S., Brown, M.L., Bregman, D., Sul, H.S., Rubin, C.S. (1987). Structure and expression of murine malic enzyme mRNA. J. Biol. Chem. 262, 1558-1565.
2. Barnett, V., Lewis, T. (1978). Discorday tests for outliers in univariate samples. In Outliers in Statistical Data, J. Wiley and Sons (eds.), vol. 3. (Bath: Pitman press), pp. 120-121.
3. Capy, P., Renard, C., Sellier, P., Vaiman, M. (1981). Etude préliminaire des relations entre le complexe majeur d'histocompatibilité (SLA) et des caractères de production chez le porc. Ann. Génét. Sél. Anim. 13, 441-446.
4. +-dependent malic enzyme cDNA and some of its abortive mutants. Arch. Biochem. Biophys. 310, 158-166.
5. Dozin, B., Magnuson, M.A., Nikodem, V.M. (1985). Tissue-specific regulation of two functional malic enzyme mRNAs by triiodothyronine. Biochemistry 24, 5581-5586.
6. Ellegren, H., Chowdhary, B., Fredholm, M., Hoyeim, B., Braüner-Nielsen, P., Thomsen, P., Andersson, L. (1994). A physical anchored linkage map of pig chromosome 1 uncovers sex and position specific recombination rates. Genomics 24, 342-350.
7. Feinberg, A.P., Vogelstein, B. (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
8. Förster, M., Hecht, W. (1984). Some provisional gene assignments in pig. Proceedings of 6th European Colloquium on Cytogenetics of Domestic Animals, Zurich, pp. 351-355.
9. Gautschi, C., Gaillard, C. (1990). Influence of major histocompatibility complex on reproduction and production traits in swine. Anim. Genet. 21, 161-170.
10. Geffrotin, C., Renard, C., Chardon, P., Vaiman, M. (1991). The swine steroid 21-hydroxylase gene (CYP21): cloning and mapping within the SLA complex. Anim. Genet. 21, 1-13.
11. Geffrotin, C., Garrido, J.J., Tremet, L., Vaiman, M. (1995). Distinct tissue distribution in pigs of tenascin-C transcripts. Eur. J. Biochem. 231, 83-92.
12. Goad, W.B., Kanehisa, M.I. (1982). Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries. Nucleic Acids Res. 10, 247-263.
13. +-dependent malic enzyme from human liver. Gene 159, 255-260.
14. Goureau, A., Yerle, M., Schmitz, A., Riquet, J., Milan, D., Pinton, P., Frelat, G., Gellin, J. (1996). Human and swine correspondence of chromosome segments using bidirectional chromosome painting. Genomics, submitted.
15. Higgins, D.G., Sharp, P.M. (1988). Clustal: a package for performing multiple sequence alignment on a microcomputer. Gene 73, 237-244.
16. Hsu, R.Y., Glynias, M.J., Satterlee, J., Feeney, R., Clarke, A.R., Emery, D.C., Roe, B.A., Wilson, R.K., Goodridge, A.C., Holbrook, J.J. (1992). Duck liver malic enzyme: expression in Escherichia coli and characterization of the wild-type enzyme and site-directed mutants. Biochem. J. 284, 869-876.
17. Jung, Y.C., Rothschild, M.F., Flanagan, M.P., Christian, L.L., Warner, C.M. (1989). Association of restriction fragment length polymorphisms of the swine leucocyte antigen class I genes with production traits of Duroc and Hampshire boars. Anim. Genet. 20, 79-91.
18. Kern, P.A., Saghizadeh, M., Ong, J.M., Bosch, R.J., Deem R., Simsolo, R.B. (1995). The expression of tumor necrosis factor in human adipose tissue. J. Clin. Invest. 95, 2111-2119.
19. Kulkarni, G., Cook, P.F., Harris, B.G. (1993). Cloning and nucleotide sequence of a full-length cDNA encoding Ascaris suum malic enzyme. Arch. Biochem. Biophys. 300, 231-237.
20. +-dependent mitochondrial malic enzyme. J. Biol. Chem. 266, 3016-3021.
21. Loeber, G., Dworkin, M.B., Infante, A., Ahorn, H. (1994a). Characterization of cytosolic malic enzyme in human tumor cells. FEBS Lett. 344, 181-186.
22. +-dependent malic enzyme. Biochem. J. 304, 687-692.
23. Magnuson, M.A., Morioka, H., Tecce, M.F., Nikodem, V.M. (1986). Coding nucleotide sequence of rat liver malic enzyme mRNA. J. Biol. Chem. 261, 1183-1186.
24. Morioka, H., Magnuson, M.A., Mitsuhashi, T., Song, M.K.H., Rail, J.E., Nikodem, V.M. (1989). Structural characterization of the rat malic enzyme gene. Proc. Natl. Acad. Sci. USA 86, 4912-4916.
25. Mourot, J., Kouba, M., Peiniau P. (1995). Comparative study of in vitro lipogenesis in various adipose tissues in the growing domestic pig (Sus domesticus). Comp. Biochem. Physiol. 111B, 379-384.
26. Müller, E. (1986). Physiological and biochemical indicators of growth and composition. In Exploiting New Technologies in Animal Breeding. Genetic Developments. (Oxford, UK: Oxford University Press), pp. 132-139.
27. Nunes, M., Peelman, L., Vaiman, M., Bourgeaux, N., Chardon, P. (1994). Characterization of six new loci within the swine major histocompatibility complex class III region. Mamm. Genome 5, 616-622.
28. O'Brien, S.J., Seuanez, H.N. (1988). Mammalian genome organization: an evolutionary view. Annu. Rev. Genet. 22, 323-351.
29. Raynal, F., Michot, B., Bachellerie, J.P. (1984). Complete nucleotide sequence of mouse 18S rRNA gene: comparison with other available homologs. FEBS Lett. 167, 263-268.
30. Renard, C., Bidanel, J.P., Palovics, A., Vaiman, M., Guerin, G., Runavot, J.P. (1988). Relations entre des marqueurs génétiques et les caractères de production chez le porc. Journ. Rech. Porcine en France, Institut technique du porc (eds.) (MNE, Paris:) vol. 20, pp. 315-320.
31. Renard, C., Mourot, J., Götz, K.U., Caritez, J.C., Bidanel, J.P., Vaiman, M. (1992). Analyse des liaisons génétiques entre les marqueurs SLA et les caractères de croissance et d'adiposité chez, le porc. Journ. Rech. Porcine en France, Institut technique du porc (eds.) (MNE, Paris:) vol. 24, pp. 9-16.
32. Rettenberger, G., Klett, C., Zechner, U., Kunz, J., Vogel, W., Hameister, H. (1995). Visualization of the conservation of syntheny between humans and pigs by heterologous chromosomal painting. Genomics 26, 372-378.
33. Satterlee, J., Hsu, R.Y. (1991). Duck liver malic enzyme: sequence of a tryptic peptide containing the cysteine residue labeled by the substrate analog bromopyruvate. Biochim. Biophys. Acta 1079, 247-252.
34. Scrutton, N.S., Berry, A., Perham, R.N. (1990). Redesign of the coenzyme specificity of a dehydrogenase by protein engineering. Nature 343, 38-43.
35. Strutz, C., Rogdakis, E. (1979). Phenotypic and genetic parameters of NADPH-generating enzymes in porcine adipose tissue. Z. Tierz. Züchtungsbiol. 96, 170-185.
36. Turner, D.M., Grant, S.C., Lamb, W.R., Brenchley, P.E., Dyer, P.A., Sinnott, P.J., Hutchinson, I.V. (1995). A genetic marker of High TNF-α production in heart transplant recipients. Transplantation 60, 1113-1117.
37. Vaiman, M. (1987). MHC in farm animals. Anim. Genet. 18, 7-10.
38. Varewyck, H., Renard, C., Bouquet, Y., Vaiman, M., Van Zeveren, A., Lampo, P. (1988). Lymphocyte antigens (SLA) in Belgian pig populations, serology, haplotype distribution and association with carcass parameters. Genetics and selection. Proc. 10th IPVS Congress, Rio de Janeiro, p. 394.
39. Wei, C.H., Chou, W.Y., Chang, G.G. (1995). Identification of Asp(258) as the metal coordinate of pigeon liver malic enzyme by site-specific mutagenesis. Biochemistry 34, 7949-7954.
40. Wierenga, R.K., De Maeyer, M.C.H., Hol, W.G.J. (1985). Interaction of pyrophosphate moieties with a-helixes in dinucleotide binding proteins. Biochemistry 24, 1346-1357.
41. Yerle, M., Galman, O., Labbib-Mansais, Y., Gellin, J. (1992). Localization of the pig luteinizing hormone/choriogonadotropin receptor gene (LHCGR) by radioactive and nonradioactive in situ hybridization. Cytogenet. Cell Genet. 59, 48-51.
42. Young, J.W., Shrago, E., Lardy, H.A. (1964). Metabolic control of enzymes involved in lipogenesis and gluconeogenesis. Biochemistry 3, 1687-1692.