The isolation and characterization of a porin protein from Bacteroides fragilis

Anaerobe

Volumn 2, Issue 5, 1996, Pages 305-312

  Wexler, Hannah M ^a,b   Getty, Colin ^a  

^a VETERANS AFFAIRS MEDICAL CENTER   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Bacteroides fragilis; Outer membrane; Porin

Indexed keywords

BACTERIAL PROTEIN; COPPER; LIPOSOME; OUTER MEMBRANE PROTEIN; PORIN;

AMINO ACID ANALYSIS; ARTICLE; BACTEROIDES FRAGILIS; CONDUCTANCE; HALF LIFE TIME; IODINATION; LIPID BILAYER; MOLECULAR WEIGHT; NONHUMAN; PERMEABILITY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DENATURATION; PROTEIN ISOLATION;

BACTERIA (MICROORGANISMS); BACTEROIDES; BACTEROIDES FRAGILIS;

EID: 0030271094     PISSN: 10759964     EISSN: None     Source Type: Journal    
DOI: 10.1006/anae.1996.0039     Document Type: Article

References (53)

1. 1. Finegold S.M. (1989) General aspects of anaerobic infections. In Fingeold S.M. and George W.L. (eds), Anaerobic Infections in Humans, pp. 137-153. Academic Press, Inc., San Diego
2. 2. Hancock R.E.W. and Nikaido H. (1978) Outer membranes of gram negative bacteria. XIX. Isolation from Pseudomonas aeruginosa PA01 and use in reconstitution and definition of the permeability barrier. J. Bacteriol. 136: 381-390
3. 3. Harder K.J., Nikaido H. and Matsuhashi M. (1981) Mutants of Escherichia coli that are resistant to certain beta-lactam compounds lack the ompF porin. Antimicrob. Agents Chemother. 20: 549-552
4. 4. Medeiros A.A., O'Brien T.F., Rosenberg E.Y. and Nikaido H. (1987) Loss of OmpC porin in a strain of Salmonella typhimurium causes increased resistance to cephalosporins during therapy. J. Infect. Dis. 156: 751-757
5. 5. Nikaido H. (1985) Role of permeability barriers in resistance to beta-lactam antibiotics. [Review]. Pharmacology & Therapeutics 27: 197-231
6. 6. Nikaido H. (1988) Bacterial resistance to antibiotics as a function of outer membrane permeability. [Review]. J. Antimicrob. Chemother. 22 Suppl A: 17-22
7. 7. Nikaido H. (1989) Outer membrane barrier as a mechanism of antimicrobial resistance. [Review]. Antimicrob. Agents Chemother. 33: 1831-1836
8. 8. Nikaido H., Rosenberg E.Y. and Foulds J. (1983) Porin channels in Escherichia coli: studies with beta-lactams in intact cells. J. Bacteriol. 153: 232-240
9. 9. Piddock L.J. and Wise R. (1985) Newer mechanisms of resistance to beta-lactam antibiotics in gram negative bacteria. Antimicrob. Agents Chemother. 16: 279-284
10. 10. Yoshimura F. and Nikaido H. (1985) Diffusion of beta-lactam antibiotics through the porin channels of Escherichia coli K-12. Antimicrob. Agents Chemother. 27: 84-92
11. 11. Cuchural G.J., Hurlbut S., Malamy M.H. and Tally F.P. (1988) Permeability to beta-lactams in Bacteroides fragilis. J. Antimicrob. Chemother. 22: 785-790
12. 12. Cuchural G.J., Tally F.P., Jacobus N.V., Marsh P.K. and Mayhew J.W. (1983) Cefoxitin inactivation by Bacteroides fragilis. Antimicrob. Agents Chemother. 24: 936-940
13. 13. Eley A. and Greenwood D. (1986) Beta-lactamases of type culture strains of the Bacteroides fragilis group and of strains that hydrolyse cefoxitin, latamoxef and imipenem. J. Med. Microbiol. 21: 49-57
14. 14. Yotsuji A., Minami S., Inoue M. and Mitsuhashi. S. (1983) Properties of novel beta-lactamase produced by Bacteroides fragilis. Antimicrob. Agents Chemother. 24: 925-929
15. 15. Diedrich D.L. and Martin A.R. (1981) Outer membrane proteins of the Bacteroides fragilis group. Curr Microbiol. 6: 85-88
16. 16. Inouye M. (1986) Bacterial Outer Membranes as Model Systems John Wiley & Sons, New York
17. 17. Kotarski S.F. and Salyers A.A. (1984) Isolation and characterization of outer membranes of Bacteroides thetaiotaomicron grown on different carbohydrates. J. Bacteriol. 158: 102-109
18. 18. Nikaido H. and Vaara M. (1987) Outer membrane. In Neidhart F.C., Ingraham J.L., Low K.B., Magasanik B., Schaechter M. and Umbarger H.R. (eds), Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. Vol. 1. pp. 7-22. American Society for Microbiology, Washington, DC
19. 19. Rosenbusch J.P. (1990) Structural and functional properties of porin channels in E. coli outer membranes. Experientia 46: 167-173
20. 20. Malouin F. and Lamothe F. (1987) The role of beta-lactamase and the permeability barrier on the activity of cephalosporins against members of the Bacteroides fragilis group. Can. J. Microbiol. 33: 262-266
21. 21. Varel V.H. and Bryant M.P. (1974) Nutritional features of Bacteroides fragilis subsp. fragilis. Appl. Microbiol. 28: 251-257
22. 22. Laemmli U.K. and Favre M. (1973) Maturation of the head of bacteriophage T4. DNA packaging events. J. Mol. Biol. 80: 575-599
23. 23. Wexler H.M., Getty C. and Fisher G. (1992) The isolation and characterisation of a major outer-membrane protein from Bacteroides distasonis. J. Med. Microbiol. 37: 165-175
24. 24. Hatch F.T. (1965) Correlation of amino-acid composition with certain characteristics of proteins. Nature 206: 777-779
25. 25. Capaldi R.A. and Vanderkooi G. (1972) The low polarity of many membrane proteins. Proc. Natl. Acad. Sci. U.S.A. 69: 930-932
26. 26. Nikaido H., and Rosenberg E.Y. (1983) Porin channels in Escherichia coli: studies with liposomes reconstituted from purified proteins. J. Bacteriol. 153: 241-252
27. 27. Nikaido H. and Rosenberg E.Y. (1981) Effect on solute size on diffusion rates through the transmembrane pores of the outer membrane of Escherichia coli. J. Gen. Physiol. 77: 121-135
28. 28. Nikaido H. (1983) Proteins forming large channels from bacterial and mitochondrial outer membranes: Porins and phage lambda receptor proteins. In Fleischer S. and Fleischer B. (eds) Methods in Enzymology, Vol 97: Biomembranes, pp 85-100 Academic Press, New York
29. 29. Armstrong S.K., Parr T.R. Jr., Parker C.D., and Hancock R.E. (1986) Bordetella pertussis major outer membrane porin protein forms small, anion-selective channels in lipid bilayer membranes. J. Bacteriol. 166: 212-216
30. 30. Kennell W.L., Egli C., Hancock R.E.W. and Holt S.C. (1992) Pore-forming ability of major outer membrane proteins from Wolinella recta ATCC 33238. Infect. Immun. 60: 380-384
31. 31. Parr T.R., Jr., Poole K., Crockford G.W. and Hancock R.E. (1986) Lipopolysaccharide-free Escherichia coli OmpF and Pseudomonas aeruginosa protein P porins are functionally active in lipid bilayer membranes. J. Bacteriol. 165: 523-526
32. 32. Jenz R., Ishu J. and Nakae T. (1980) Determination of ion permeability through the channels made of porins from the outer membrane of Salmonella typhimurium in lipid bilayer membranes. Journal of Membrane Biology 56: 19-29
33. 33. Buscher K., Cullman W., Dick W., Wendt S. and Opferkuch W. (1987). Imipenem resistance in Pseudomonas aeruginosa is due to diminished expression of outer membrane proteins. J. Infect. Dis 156: 681-684
34. 34. Mitsuyama J., Hiruma R., Yamaguchi A. and Sawai T. (1987) Identification of porins in outer membrane of Proteus, Morganella, and Providencia spp. and their role in outer membrane permeation of beta-lactams. Antimicrob. Agents Chemother. 31: 379-384
35. 35. Parr T.R., Jr., Moore R.A., Moore L.V. and Hancock R.E. (1987) Role of porins in intrinsic antibiotic resistance of Pseudomonas cepacia. Antimicrob. Agents Chemother. 31: 121-123
36. 36. Sawai T., Hiruma R., Kawana N., Kaneko M., Taniyasu F. and Inami A. (1982) Outer membrane permeation of beta-lactam antibiotics in Escherichia coli, Proteus mirabilis, and Enterobacter cloacae. Antimicrob. Agents Chemother. 22: 585-592
37. 37. Trias J., Dufresne J., Levesque R.C. and Nikaido H. (1989) Decreased outer membrane permeability in imipenem-resistant mutants of Pseudomonas aeruginosa. Antimicrob. Agents Chemother. 33: 1202-1206
38. 38. Godfrey A.J. and Bryan L.E. (1987) Penetration of beta-lactams through Pseudomonas aeruginosa porin channels. Antimicrob. Agents Chemother. 31: 1216-1221
39. 39. Crosby M.A. and Gump D.W. (1982) Activity of cefoperazone and two beta-lactamase inhibitors, sulbactam and clavulanic acid, against Bacteroides spp. correlated with beta-lactamase production. Antimicrob. Agents Chemother. 22: 398-405
40. 40. Olsson B., Dornsbusch K. and Nord C.E. (1979) Factors contributing to resistance to beta-lactam antibiotics in Bacteroides fragilis. Antimicrob. Agents Chemother 15: 263-268
41. 41. Nikaido H. (1994) Porins and specific diffusion channels in bacterial outer membranes. J. Biol. Chem. 269: 3905-3908
42. 42. Lane L.C. (1978) A simple method for stabilizing protein-sulfhydryl groups during SDS-gel electrophoresis. Anal. Biochem. 86: 655-664
43. 43. Hancock R.E.W. and Carey A.M. (1979) Outer membrane of Pseudomonas aeruginosa: Heat-and 2-Mercaptoethanol-modifiable proteins. J. Bacteriol. 140: 902-910
44. 44. Hancock R.E.W., Decad G.M. and Nikaido H. (1979) Identification of the protein producing transmembrane diffusion pores in the outer membrane of Pseudomonas aeroginosa PA01. Biochim. Biophys. Acta 554: 323-331
45. 45. Page W.J., Huyer G., Huyer M. and Worobec E.A. (1989) Characterization of the porins of Campylobacter jejuni and Campylobacter coli and implications for antibiotic susceptibility. Antimicrob. Agents Chemother. 33: 297-303
46. 46. Takada H., Ogawa T., Yoshimura F., Otsuka K., Kokeguchi S., Kato K., Umemoto T. and Kotani S. (1988) Immunobiological activities of a porin fraction isolated from Fusobacterium nucleatum ATCC 10953. Infect. Immun. 56: 855-863
47. 47. Woodruff W.A. and Hancock R.E. (1989) Pseudomonas aeruginosa outer membrane protein F: structural role and relationship to the Escherichia coli OmpA protein. J. Bacteriol. 171: 3304-3309
48. 48. Sugawara E. and Nikaido H. (1994) OmpA protein of Escherichia coli outer membrane occurs in open and closed channel forms. J. Biol. Chem. 269: 17981-17987
49. 49. Bakken V., Aaro S. and Jensen H.B. (1989) Purification and partial characterization of a major outer membrane protein of Fusobacterium nucleatum. J. Gen. Microbiol. 135: 3253-3262
50. 50. Kleivdal H., Benz R. and Jensen H.B. (1995) The Fusobacterium nucleatum major outer-membrane protein (FomA) forms trimeric, water-filled channels in lipid bilayer membranes. Eur. J. Biochem. 233: 310-316
51. 51. Bolstad A.I. and Jensen H.B. (1993) Complete sequence of omp1, the structural gene encoding the 40-kDa outer membrane protein of Fusobacterium nucleatum strain Fev1. Gene 132: 107-112
52. 52. Bolstad A.I., Tommassen, J. and Jensen H.B. (1994) Sequence variability of the 40-kDa outer membrane proteins of Fusobacterium nucleatum strains a model for the topology of the proteins. Mol. Gen. Gen. 244: 104-110.
53. 53. Jarlier V., Gutmann L. and Nikaido H. (1991) Interplay of cell wall barrier and beta-lactamase activity determines high resistance to beta-lactam antibiotics in Mycobacterium chelonae. Antimicrob. Agents Chemother. 35: 1937-1939