Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene

Plant Journal

Volumn 10, Issue 3, 1996, Pages 425-435

  Chaubet, Nicole ^a   Flénet, Martine ^a   Clément, Bernadette ^a   Brignon, Pierre ^a   Gigot, Claude ^a  

^a INST DE BIOL MOLEC DES PLANTES   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLUCURONIDASE; HISTONE; HYBRID PROTEIN; MESSENGER RNA; PLANT RNA;

ARABIDOPSIS; ARTICLE; BIOSYNTHESIS; DNA FOOTPRINTING; GENE EXPRESSION REGULATION; GENETICS; MERISTEM; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE; PROMOTER REGION; REPORTER GENE; TRANSGENIC PLANT;

ARABIDOPSIS; BASE SEQUENCE; DNA FOOTPRINTING; GENE EXPRESSION REGULATION, PLANT; GENES, REPORTER; GLUCURONIDASE; HISTONES; MERISTEM; MOLECULAR SEQUENCE DATA; MUTATION; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS (GENETICS); RECOMBINANT FUSION PROTEINS; RNA, MESSENGER; RNA, PLANT;

ARABIDOPSIS; ZEA MAYS;

EID: 0030239381     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.1996.10030425.x     Document Type: Article

References (45)

1. Atanassova, R., Chaubet, N. and Gigot, C. (1992) A 126 bp fragment of a plant histone gene promoter confers preferential expression in meristems of transgenic Arabidopsis. Plant J. 2, 291-300.
2. Axelos, M., Curie, C., Mazzolini, L., Bardet, L. and Lescure, B. (1992) A protocol for transient gene expression in Arabidopsis thaliana protoplasts isolated from cell suspension cultures. Plant Physiol. Biochem. 30, 123-128.
3. Bevan, M. (1984) Binary Agrobacterium vectors for plant transformation. Nucl. Acids Res. 12, 8711-8721.
4. Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254.
5. Brignon, P. and Chaubet, N. (1993) Constitutive and cell divisioninducible protein- DNA interactions in two maize histone gene promoters. Plant J. 4, 445-457.
6. Brignon, P., Lepetit, M., Gigot, C. and Chaubet, N. (1993a) Nuclease sensitivity and functional analysis of a maize histone H3 gene promoter. Plant Mol. Biol. 22, 1007-1015.
7. Brignon, P., Gigot, C. and Chaubet, N. (1993b) In vivo footprinting by LMPCR procedure. Plant Mol. Biol. Man. B18, 1-34.
8. Chabouté, M.E., Chaubet, N., Philipps, G., Ehling, M. and Gigot, C. (1987) Genomic organization and nucleotide sequences of two histone H3 and two histone H4 genes of Arabidopsis thaliana. Plant Mol. Biol. 8, 179-191.
9. Chaubet, N., Clément, B., Philipps, G. and Gigot, C. (1991) Organ-specific expression of different histone H3 and H4 gene subfamilies in developing and adult maize. Plant Mol. Biol. 17, 935-940.
10. Chaubet, N., Clément, B. and Gigot, C. (1992) Genes encoding a histone H3.3-like variant in Arabidopsis contain intervening sequences. J. Mol. Biol. 225, 569-574.
11. Cheng, J.C., Seeley, K.A. and Sung, Z.R. (1995) RML1 and RML2, Arabidopsis genes required for cell proliferation at the root tip. Plant Physiol. 107, 365-376.
12. Dellaporta, S.L., Wood, J. and Hicks, J.B. (1983) A plant DNA minipreparation: version II. Plant Mol. Biol. Rep. 1, 19-21.
13. Dorn, A., Bollekens, J., Staub, A., Benoist, C. and Mathis, D. (1987) A multiplicity of CCAAT box-binding proteins. Cell, 50, 863-872.
14. Goodall, G., Wiebauer, K. and Filipowicz, W. (1990) Analysis of pre-mRNA processing in transfected plant protoplasts. Methods Enzymol. 181, 148-161.
15. Heintz, N. (1991) The regulation of histone gene expression during the cell cycle. Biochim. Biophys. Acta, 1088, 327-339.
16. Jefferson, R. A., Kavanagh, T. A. and Bevan, M. W. (1987) GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6, 3901-3907.
17. Johnson, P. F. and Mc Knight, S. L. (1989) Eukaryotic transcriptional regulatory proteins. Ann. Rev. Biochem. 58, 799-839.
18. Kapros, T., Bogre, L., Nemeth, K., Bako, L., Gyorgyey, J., Wu, S.C. and Dudits, D. (1992) Differential expression of histone H3 gene variants during cell cycle and somatic embryogenesis in alfalfa Plant Physiol. 98, 621-625.
19. Kawata, T., Nakayama, T., Mikami, K., Tabata, T., Takase, H. and Iwabuchi, M. (1988) DNA-binding protein(s) interacts with a conserved nonameric sequence in the upstream regions of wheat histone genes. FEBS Lett. 239, 319-323.
20. Köhler, S., Coraggio, I., Becker, D. and Salamini, F. (1992) Pattern of expression of meristem-specific cDNA clones of barley (Hordeum vulgare L.). Planta, 186, 227-235.
21. Koning, A.J., Tanimoto, E.Y., Kiehne, K., Rost, T. and Comai, L. (1991) Cell-specific expression of plant histone H2A genes. Plant Cell, 3, 657-665.
22. Kunkel, T. A. (1985) Rapid and efficient site-specific mutagenesis without phenotypic selection. Proc. Natl Acad. Sci. USA, 82, 488-491.
23. Lepetit, M., Ehling, M., Atanassova, R., Chaubet, N. and Gigot, C. (1993) Replication-independent cis-acting element of a maize histone gene promoter. Plant Sci. 89, 177-184.
24. Li, X.Y., Mantovani, R., Hooft van Huijsduijnen, R., Andre, I., Benoist, C. and Mathis, D. (1992) Evolutionary variation of the CCAAT-binding transcription factor NF-Y. Nucl. Acids Res. 20, 1087-1091.
25. Maréchal-Drouard, L. and Guillemaut, P. (1992) Plant DNA isolation: a fast, unexpensive and reliable method. Plant Mol. Biol. Rep. 10, 69-74.
26. Mikami, K. and Iwabuchi, M. (1992) Regulation of cell cycle-dependent gene expression. In Control of Plant Gene Expression (Desh Pal S. and Verna, Ph.D., eds). Boca Raton, FL: CRC Press, pp. 51-68.
27. Mitchell, P.J. and Tjian, R. (1989) Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins. Science, 245, 371-378.
28. Mueller, P.R. and Wold, B. (1989) In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. Science, 246, 780-786.
29. Nakayama, T. and Iwabuchi, M. (1993) Regulation of wheat histone gene expression. Crit. Rev. Plant Sci. 12, 97-110.
30. Nakayama, T., Sakamoto, A., Yang, P., Minami, M., Fujimoto, Y., Ito, T. and Iwabuchi, M. (1992) Highly conserved hexamer, octamer and nonamer motifs are positive cis-regulatory elements of the wheat histone H3 gene. FEBS Lett. 300, 167-170.
31. Ohtsubo, N., Nakayama, T., Terada, R., Shimamoto, K. and Iwabuchi, M. (1993) Proximal promoter region of the wheat histone H3 gene confers S phase-specific gene expression in transformed rice cells. Plant Mol. Biol. 23, 553-565.
32. Osley, M.A. (1991) The regulation of histone synthesis in the cell cycle. Ann. Rev. Biochem. 60, 827-861.
33. Reichheld, J.P., Sonobe, S., Clément, B., Chaubet, N. and Gigot, C. (1995) Cell cycle-regulated histone gene expression in synchronized plant cells. Plant J. 7, 245-252.
34. Rigaud, G., Roux, J., Pictet, R. and Grange, T. (1991) In vivo footprinting of rat TAT gene: dynamic interplay between the glucocorticoid receptor and a liver-specific factor. Cell, 67, 977-986.
35. Saluz, H.P. and Jost, J.P. (1989) A simple high-resolution procedure to study DNA methylation and in vivo DNA-protein interactions on a single-copy gene level in higher eucaryotes. Proc. Natl Acad. Sci. USA, 86, 2602-2606.
36. Saluz, H.P. and Jost, J.P. (1990) A laboratory guide for in vivo studies of DNA methylation and protein/DNA interactions. In Biomethods, Volume 3 (Azzi, A., Polack, I.M. and Saluz, H.P., eds). Basel: Birkhauser Verlag, pp. 68-78.
37. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
38. Schümperli, D. (1988) Multilevel regulation of replication-dependent histone genes. Trends Genet. 4, 187-191.
39. Tabata, T., Takase, H., Takayama, S., Mikami, K., Nakatsuka, A., Kawata, T., Nakayama, T. and Iwabuchi, M. (1989) A protein that binds to a cis-acting element of wheat histone genes has a leucine zipper motif. Science, 245, 965-967.
40. Tabata, T., Nakayama, T., Mikami, K. and Iwabuchi, M. (1991) HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J. 10, 1459-1467.
41. Tanimoto, E.Y., Rost, T.L. and Comai, L. (1993) DNA replication-dependent histone H2A mRNA expression in pea root tips. Plant Physiol. 103, 1291-1297.
42. Terada, R., Nakayama, T., Iwabuchi, M. and Shimamoto, K. (1993) A wheat histone H3 promoter confers cell division-dependent and -independent expression of the gus A gene in transgenic rice plants. Plant J. 3, 241-252.
43. Terada, R., Nakayama, T., Iwabuchi, M. and Shimamoto, K. (1995) A type I element composed of the hexamer (ACGTCA) and octamer (CGCGGATC) motifs plays a role(s) in meristematic expression of a wheat histone H3 gene in transgenic rice plants. Plant Mol. Biol. 27, 17-26.
44. Valvekens, D., Van Montagu, M. and Van Lijsebettens, M. (1988) Agrobacterium tumefaciens-mediated transformation of Arabidopsis thaliana root explants by using kanamycin selection. Proc. Natl Acad. Sci. USA, 85, 5536-5540.
45. Van Wijnen, A. J., Aziz, F., Grana, X. et al. (1994) Transcription of histone H4, H3, and H1 cell cycle genes: Promoter factor HiNF-D contains CDC2, cyclin A, and an RB-related protein. Proc. Natl Acad. Sci. USA, 91, 12882-12886.