DNA elements responsive to auxin

BioEssays

Volumn 18, Issue 8, 1996, Pages 647-654

  Abel, Steffen ^a   Ballas, Nurit ^a   Wong, Lu Min ^a   Theologis, Athanasios ^a  

^a PLANT GENE EXPRESSION CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0030218078     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/bies.950180808     Document Type: Review

References (62)

1. Went, F.W. and Thimann, K.V. (1937). Phytohormones. Macmillan, New York.
2. Estelle, M. (1992). The plant hormone auxin: insight in sight. BioEssays 14, 439-444.
3. Klee, H.J. and Romano, C.P. (1994). The roles of phytohormones in development as studied in transgenic plants. CRC Crit. Rev. Plant Sci. 13, 311-324.
4. Hobbie, L. and Estelle, M. (1994). Genetic approaches to auxin action. Plant Cell Physiol. 17, 525-540.
5. Evans, M. and Ray, P.M. (1969). Timing of the auxin response in coleoptiles and its implications regarding auxin action. J. Gen. Physiol. 53, 1-20.
6. Brummell, D.A. and Hall, J.L. (1987). Rapid cellular responses to auxin and the regulation of growth. Plant Cell Environ. 10, 523-543.
7. Edelmann, H. and Schopfer, P. (1989). Role of protein and RNA synthesis in the initiation of auxin-mediated growth in coleoptiles of Zea mays L. Planta 179, 475-485.
8. Guilfoyle, T.J. (1986). Auxin-regulated gene expression in higher plants. CRC Crit. Rev. Plant Sci. 4, 247-276.
9. Key, J.L. (1989) Modulation of gene expression by auxin. BioEssays 11, 52-58.
10. Theologis, A. (1986). Rapid gene regulation by auxin. Annu. Rev. Plant. Physiol. 37, 407-438.
11. Ecker, J.R. (1995). The ethylene signal transduction pathway in plants. Science 268, 667-675.
12. Darnell Jr., J.E., Kerr, I.M. and Stark, G.R. (1994). Jak-STAT pathways and transcriptional activation in response to IFNs and other extracellular signaling proteins. Science 264, 1415-1421.
13. Guilfoyle, T.J. et al. (1993). Auxin-regulated transcription. Aust. J. Plant Physiol. 20, 489-502.
14. Takahashi, Y., Ishida, S. and Nagata, T. (1995). Auxin-regulated genes. Plant Cell Physiol. 36, 383-390.
15. Abel, S. and Theologis, A. (1996). Early genes and auxin action. Plant Physiol. 111, 9-17.
16. Ballas, N., Wong, L.M. and Theologis, A. (1993). Identification of the auxin-responsive element, AuxRE, in the primary indoleacetic acid-inducible gene, PS-IAA4/5, of pea (Pisum sativum). J. Mol. Biol. 233, 580-596.
17. Ballas, N., Wong, L.M., Ke, M. and Theologis, A. (1995). Two auxin-responsive domains interact positively to induce expression of the early indoleacetic acid-inducible gene, PS-IAA4/5. Proc. Natl Acad. Sci. USA 92, 3483-3487.
18. Liu, Z.B., Ulmasov, T., Shi, X., Hagen, G. and Guilfoyle, T.J. (1994). Soybean GH3 promoter contains multiple auxin-inducible elements. Plant Cell 6, 645-657.
19. Ulmasov, T., Liu, Z.B., Hagen, G. and Guilfoyle, T.J. (1995). Composite structure of auxin response elements. Plant Cell 7, 1611-1623.
20. Li, V., Liu, Z.B., Shi, X., Hagen, G. and Guilfoyle, T.J. (1994). An auxin-inducible element in soybean SAUR promoters. Plant Physiol. 106, 37-43.
21. Ulmasov, T., Hagen, G. and Guilfoyle, T.J. (1994). The ocs element in the soybean GH2/4 promoter is activated by both active and inactive auxin and salicylic acid analogues. Plant Mol. Biol. 26, 1055-1064.
22. Droog, F. et al. (1995). Promoter analysis of the auxin-regulated tobacco glutathione S-transferase genes Nt103-1 and Nt103-35. Plant Mol. Biol. 29, 413-429.
23. Herschman, H.R. (1991). Primary response genes induced by growth factors and tumor promoters. Annu. Rev. Biochem. 60, 281-319.
24. Hill, C.S. and Treisman, R. (1995). Transcriptional regulation by extracellular signals: mechanisms and specificity. Cell 80, 199-211.
25. Hagen, G. and Guilfoyle, T.J. (1985). Rapid induction of selective transcription by auxins. Mol. Cell. Biol. 5, 1197-1203.
26. Franco, A.R., Gee, M.A. and Guilfoyle, T.J. (1990). Induction and superinduction of auxin-responsive mRNAs with auxin and protein synthesis inhibitors. J. Biol. Chem. 265, 15845-15849
27. Ellis, J.G. et al. (1993). Does the ocs-element occur as a functional component of the promoters of plant genes? Plant J. 4, 433-443.
28. Nagao R.T., Goekjlan, V.H., Hong, J.C. and Key J.L. (1993) Identification of protein-binding DNA sequences in an auxin-regulated gene of soybean. Plant Mol. Biol. 21, 1147-1162.
29. Oeller, P.W., Keller, J.A., Parks, J.E., Silbert, J.E. and Theologis, A. (1993). Structural characterization of the early indoleacetic acid-inducible genes, PS-IAA4/5 and PS-IAA6, of pea (Pisum sativum L). J. Mol. Biol. 233, 789-798.
30. Lucas, P.C. and Granner, D.K. (1992). Hormone response domains in gene transcription. Annu. Rev. Biochem. 61, 1131-1173.
31. Rogers, J.C. and Rogers, S.W. (1992). Definition and functional implications of gibberellin and abscisic acid cis-acting hormone response complexes. Plant Cell 4, 1443-1451.
32. Abel, S., Nguyen, D., Chow, W. and Theologis, A. (1995). ACS4, a primary auxin-responsive gene encoding 1-aminocyclopropane-1-carboxylate synthase in Arabidopsis thaliana. J. Biol. Chem. 270, 19093-19099.
33. Theologis, A., Huynh, T.V. and Davis, R.W. (1985). Rapid induction of specific mRNAs by auxin in pea epicotyl tissue. J. Mol. Biol. 183, 53-68.
34. Koshiba, T., Ballas, N., Wong, L.M. and Theologis, A. (1995) Transcriptional regulation of PS-IAA4/5 and PS-IAA6 early gene expression by indoleacetic acid and protein synthesis inhibitors in pea (Pisum sativum). J. Mol. Biol. 253, 396-413.
35. Oeller, P.W. and Theologis, A. (1995). Induction kinetics of the nuclear proteins encoded by the early indoleacetic acid-inducible genes, PS-IAA4/5 and PS-IAA6 in pea (Pisum sativum L). Plant J. 7, 37-48.
36. Abel, S., Oeller, P.W. and Theologis A. (1994). Early auxin-induced genes encode short-lived nuclear proteins. Proc. Natl Acad. Sci. USA 91, 326-330
37. Abel, S. and Theologis, A. (1995). A polymorphic bipartite motif signals nuclear targeting of early auxin-inducible proteins related to PS-IAA4 from pea (Pisum sativum). Plant J. 8, 87-96.
38. Wong, L.M., Abel, S., Shen, N., de la Foata, M., Mall, Y. and Theologis, A. (1996). Differential activation of the primary auxin response genes, PS-IAA4/5 and PS-IAA6, during early plant development. Plant J. 9, 587-599.
39. McClure, B.A., Hagen, G., Brown, C.S., Gee, M.A. and Guilfoyle, T.J. (1989). Transcription, organization, and sequence of an auxin-regulated gene cluster in soybean. Plant Cell 1, 229-239.
40. Gil, P., Liu, Y., Orbovic, V., Verkamp, E., Poff, K.L. and Green, P.J. (1994). Characterization of the auxin-inducible SAUR-AC1 gene for use as a genetic tool in Arabidopsis. Plant Physiol. 104, 777-784.
41. Izawa, T., Foster, R. and Chua, N.-H. (1993). Plant bZIP protein DNA binding specificity. J. Mol. Biol. 230, 1131-1144.
42. Takahashi, Y. and Nagata, T. (1992). parB: An auxin-regulated gene encoding glutathione S-transferase. Proc. Natl Acad. Sci. USA 89, 56-59.
43. Droog, F.N.J., Hookaas, P.J.J., Libbenga, K.R. and Van der Zaal, E.J. (1993). Proteins encoded by an auxin-regulated gene family of tobacco share limited but significant homology with glutathione S-tranferase and one member indeed shows in vitro GST activity. Plant. Mol. Biol. 21, 965-972.
44. Mito, N. and Bennett, A.B. (1995). The diageotropica mutation and synthetic auxins differentially affect the expression of auxin-regulated genes in tomato. Plant Physiol. 109, 293-297.
45. Clark, A.R and Docherty, K. (1993). Negative regulation of transcription in eukaryotes. Biochem. J. 296, 521-541.
46. Menkens, A.E., Schindler, U. and Cashmore A.R. (1995). The G-box: a ubiquitous regulatory DNA element in plants bound by the GBF family of bZIP proteins. Trends Biochem. 20, 506-510.
47. Shen, Q. and Ho, T.-H. D. (1995). Functional dissection of an abscisic acid (ABA)-inducible gene reveals two independent ABA-responsive complexes each containing a G-Box and a novel cis-acting element. Plant Cell 7, 295-307.
48. Lanahan, M.B., Ho, T.-H. D., Rogers, S.W. and Rogers, J.C. (1992). A gibberellin response complex in cereal α-amylase gene promoters. Plant Cell 4, 203-211.
49. Gee, M.A., Hagen, G., Guilfoyle, T.J. (1991). Tissue-specific and organ-specific expression of soybean auxin-responsive transcripts GH3 and SAURs. Plant Cell 3, 419-430.
50. Hong, J.C., Cheong, Y.H., Nagao R.T., Bahk, J.D., Key J.L. and Cho M.J. (1995). Isolation of two soybean G-box binding factors which interact with a G-box sequence of an auxin-responsive gene. Plant J. 8, 199-211.
51. Napier, R.M. and Venis, M.A. (1995). Auxin action and auxin-binding proteins. New Phytol. 129, 167-201.
52. Abel, S., Nguyen, D. and Theologis, A. (1995). The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. J. Mol. Biol. 251, 533-549.
53. Gil, P. and Green, P.J. (1996). Multiple regions of the Arabidopsis SAUR-AC1 gene control transcript abundance: The 3′ untranslated region functions as an mRNA instability domain. EMBO J. 15, 1678-1686.
54. Li, Y., Strabala, T.J., Hagen, G. and Guilfoyle, T.J. (1994). The soybean SAUR open reading frame contains a cis element responsible for cycloheximide-induced mRNA accumulation. Plant Mol. Biol. 24, 715-723.
55. Herschbach, B.M. and Johnson, A.D. (1993). Transcriptional repression in eukaryotes. Annu. Rev. Cell Biol. 9, 479-509.
56. Cowell, I.G. (1994). Repression versus activation in the control of gene transcription. Trends Biochem. 19, 38-42.
57. Ohme-Takagi, M. and Shinshi, H. (1995). Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element. Plant Cell 7, 173-182.
58. Gubler, F., Kalla, R., Roberts, U.K. and Jacobsen, J.V. (1995). Gibberellin-regulated expression of a myb gene in barley aleurone cells: evidence for Myb transactivation of a high-pl α-amylase gene promoter. Plant Cell 7, 1879-1891.
59. Shen Q., Uknes, S.J. and Ho, T.-H.D. (1993). Hormone response complex in a novel abscisic acid and cycloheximide-inducible barley gene. J. Biol. Chem. 268, 23652-23660.
60. Meller, Y., Sessa, G., Eyal, Y. and Fluhr, R. (1993). DNA-protein interactions on a cis-DNA element essential for ethylene regulation. Plant Mol. Biol. 23, 453-463.
61. Mason, H.S., DeWald, D.B. and Mullet, J.E. (1993). Identification of a methyl jasmonate-responsive domain in the soybean vspB promoter. Plant Cell 5, 241-251.
62. Zarembinski, T.I. and Theologis, A. (1995). Ethylene biosynthesis and action: a case of conservation. Plant Mol. Biol. 26, 1579-1597.