메뉴 건너뛰기




Volumn 12, Issue 4, 1996, Pages 434-448

Validation of a metabolic network for Saccharomyces cerevisiae using mixed substrate studies

Author keywords

[No Author keywords available]

Indexed keywords

ACETIC ACID DERIVATIVE; ALCOHOL; ENZYME; GLUCOSE; POLYSACCHARIDE; RNA;

EID: 0030199054     PISSN: 87567938     EISSN: None     Source Type: Journal    
DOI: 10.1021/bp960022i     Document Type: Article
Times cited : (59)

References (39)
  • 1
    • 0018393802 scopus 로고
    • Identification of metabolic model: Citrate production from glucose by Candida lipolytica
    • Aiba, S.; Matsuoka, M. Identification of metabolic model: Citrate production from glucose by Candida lipolytica. Biotechnol. Bioeng. 1979, 21, 1373-1386.
    • (1979) Biotechnol. Bioeng. , vol.21 , pp. 1373-1386
    • Aiba, S.1    Matsuoka, M.2
  • 2
    • 0025895183 scopus 로고
    • Toward a science of metabolic engineering
    • Bailey, J. E. Toward a science of metabolic engineering. Science 1991, 252, 1668-1675.
    • (1991) Science , vol.252 , pp. 1668-1675
    • Bailey, J.E.1
  • 3
    • 0002115313 scopus 로고
    • Confidence regions in non-linear estimation
    • Beale, E. M. L. Confidence regions in non-linear estimation. J. R. Stat. Soc. 1960, B22, 41-88.
    • (1960) J. R. Stat. Soc. , vol.B22 , pp. 41-88
    • Beale, E.M.L.1
  • 4
    • 0020614458 scopus 로고
    • A theoretical analysis of NADPH production and consumption in yeasts
    • Bruinenberg, P. M.; van Dijken, J. P.; Scheffers, W. A. A theoretical analysis of NADPH production and consumption in yeasts. J. Gen. Microbiol. 1983, 129, 953-964.
    • (1983) J. Gen. Microbiol. , vol.129 , pp. 953-964
    • Bruinenberg, P.M.1    Van Dijken, J.P.2    Scheffers, W.A.3
  • 5
    • 0025031859 scopus 로고
    • Diauxic metabolism of Hansenula polymorpha-Steady and unsteady-state considerations
    • Bryers, J. D.; Yeh, T. Diauxic metabolism of Hansenula polymorpha-Steady and unsteady-state considerations. Ann. N.Y. Acad. Sci. 1990, 589, 314-332.
    • (1990) Ann. N.Y. Acad. Sci. , vol.589 , pp. 314-332
    • Bryers, J.D.1    Yeh, T.2
  • 6
    • 0023137567 scopus 로고
    • Transport of lactate and other short-chain monocarboxylates in the yeast Saccharomyces cerevisiae
    • Cassio, F.; Leao, C.; van Uden, N. Transport of lactate and other short-chain monocarboxylates in the yeast Saccharomyces cerevisiae. Appl. Environ. Microbiol. 1987, 53, 509-513.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 509-513
    • Cassio, F.1    Leao, C.2    Van Uden, N.3
  • 8
    • 0028953910 scopus 로고
    • Metabolic fluxes in chemostat cultures of Saccharomyces cerevisiae grown on mixtures of glucose and ethanol
    • de Jong-Gubbels, Vanrolleghem, P.; Heijnen, J. J.; van Dijken, J. P.; Pronk, J. T. Metabolic fluxes in chemostat cultures of Saccharomyces cerevisiae grown on mixtures of glucose and ethanol. Yeast 1995, 11, 407-418.
    • (1995) Yeast , vol.11 , pp. 407-418
    • De Jong-Gubbels1    Vanrolleghem, P.2    Heijnen, J.J.3    Van Dijken, J.P.4    Pronk, J.T.5
  • 9
    • 0027909872 scopus 로고
    • Analysis of metabolic fluxes in batch and continuous cultures of Bacillus subtilis
    • Goel, A.; Ferrance, J.; Jeong, J.; Ataai, M. M. Analysis of metabolic fluxes in batch and continuous cultures of Bacillus subtilis. Biotechnol. Bioeng. 1993, 42, 686-696.
    • (1993) Biotechnol. Bioeng. , vol.42 , pp. 686-696
    • Goel, A.1    Ferrance, J.2    Jeong, J.3    Ataai, M.M.4
  • 10
    • 4243156247 scopus 로고
    • Theoretical considerations on the relation between energy production and growth of methane-utilizing bacteria
    • Schlegel, H. G., Gottschalk, G., Pfennig, N., Eds.; E. Goltze KG: Gottingen, Germany
    • 4, CO); Schlegel, H. G., Gottschalk, G., Pfennig, N., Eds.; E. Goltze KG: Gottingen, Germany, 1976; pp 403-418.
    • (1976) 4, CO) , pp. 403-418
    • Harder, W.1    Van Dijken, J.P.2
  • 11
  • 12
    • 0022985811 scopus 로고
    • The central metabolic pathways of Escherichia coli: Relationship between flux and control at a branch point, efficiency of conversion to biomass, and excretion of acetate
    • Academic Press: New York
    • Holms, W. H. The central metabolic pathways of Escherichia coli: Relationship between flux and control at a branch point, efficiency of conversion to biomass, and excretion of acetate. In Current Topics in Cellular Regulation; Academic Press: New York, 1986; Vol. 28, pp 69-105.
    • (1986) Current Topics in Cellular Regulation , vol.28 , pp. 69-105
    • Holms, W.H.1
  • 13
    • 0029278153 scopus 로고
    • Metabolic flux distribution in Penicillium chrysogenum during fed-batch cultivations
    • Jorgensen, H.; Nielsen, J.; Villadsen, J.; Mollgaard, H. Metabolic flux distribution in Penicillium chrysogenum during fed-batch cultivations. Biotechnol. Bioeng. 1995, 46, 117-131.
    • (1995) Biotechnol. Bioeng. , vol.46 , pp. 117-131
    • Jorgensen, H.1    Nielsen, J.2    Villadsen, J.3    Mollgaard, H.4
  • 15
    • 0022592594 scopus 로고
    • Transport of lactate and other short-chain monocarboxylates in the yeast Candida utilis
    • Leao, C.; van Uden, N. Transport of lactate and other short-chain monocarboxylates in the yeast Candida utilis. Appl. Microbiol Biotechnol 1986, 23, 389-393.
    • (1986) Appl. Microbiol Biotechnol , vol.23 , pp. 389-393
    • Leao, C.1    Van Uden, N.2
  • 16
    • 0025405421 scopus 로고
    • Simple constrained-optimization view of acetate overflow in E. coli
    • Majewski, R. A.; Domach, M. M. Simple constrained-optimization view of acetate overflow in E. coli. Biotechnol. Bioeng. 1990, 35, 732-738.
    • (1990) Biotechnol. Bioeng. , vol.35 , pp. 732-738
    • Majewski, R.A.1    Domach, M.M.2
  • 19
    • 0026223316 scopus 로고
    • Linear relations in microbial reaction systems: A general overview of their origin, form, and use
    • Noorman, H. J.; Heijnen, J. J.; Luyben, K. Ch.A. M. Linear relations in microbial reaction systems: A general overview of their origin, form, and use. Biotechnol Bioeng. 1991, 38, 603-618.
    • (1991) Biotechnol Bioeng. , vol.38 , pp. 603-618
    • Noorman, H.J.1    Heijnen, J.J.2    Luyben, K.Ch.A.M.3
  • 21
    • 0025568688 scopus 로고
    • On-line application of parameter estimation accuracy to biotechnical processes
    • Book, W. J., Ed.; IEEE Publ. Services: New Jersey
    • Posten, C.; Munack, A. On-line application of parameter estimation accuracy to biotechnical processes. In Proceedings American Control Conference; Book, W. J., Ed.; IEEE Publ. Services: New Jersey, 1990; pp 2181-2186.
    • (1990) Proceedings American Control Conference , pp. 2181-2186
    • Posten, C.1    Munack, A.2
  • 22
    • 0022376208 scopus 로고
    • Identifiability and distinguishability testing via computer algebra
    • Raksanyi, A.; Lecourtier, Y.; Walter, E.; Venot, A. Identifiability and distinguishability testing via computer algebra. Math. Biosci. 1985, 77, 245-266.
    • (1985) Math. Biosci. , vol.77 , pp. 245-266
    • Raksanyi, A.1    Lecourtier, Y.2    Walter, E.3    Venot, A.4
  • 23
    • 0017710914 scopus 로고
    • Negative interactions between amino acid and methylamine/ammonia transport systems of Saccharomyces cerevisiae
    • Roon, R. J.; Levy, J. S.; Larimore, F. Negative interactions between amino acid and methylamine/ammonia transport systems of Saccharomyces cerevisiae. J. Biol. Chem. 1977, 252, 3599-3604.
    • (1977) J. Biol. Chem. , vol.252 , pp. 3599-3604
    • Roon, R.J.1    Levy, J.S.2    Larimore, F.3
  • 24
    • 0014658880 scopus 로고
    • Biochemical systems analysis. II. The steady state solutions for an n-pool system using a power-law approximation
    • Savageau, M. A. Biochemical systems analysis. II. The steady state solutions for an n-pool system using a power-law approximation. J. Theor. Biol. 1969, 25, 370-379.
    • (1969) J. Theor. Biol. , vol.25 , pp. 370-379
    • Savageau, M.A.1
  • 27
    • 0001985853 scopus 로고
    • Flux determination in cellular bioreaction networks: Applications to lysine fermentations
    • Sikdar, S. K., Bier, M., Todd, P., Eds.; CRC Press: Boca Raton, FL
    • Vallino, J. J.; Stephanopoulos, G. Flux determination in cellular bioreaction networks: Applications to lysine fermentations. In Frontiers in Bioprocessing; Sikdar, S. K., Bier, M., Todd, P., Eds.; CRC Press: Boca Raton, FL, 1990; pp 205-219.
    • (1990) Frontiers in Bioprocessing , pp. 205-219
    • Vallino, J.J.1    Stephanopoulos, G.2
  • 28
    • 0027572102 scopus 로고
    • Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction
    • Vallino, J. J.; Stephanopoulos, G. Metabolic flux distributions in Corynebacterium glutamicum during growth and lysine overproduction. Biotechnol. Bioeng. 1993, 41, 633-646.
    • (1993) Biotechnol. Bioeng. , vol.41 , pp. 633-646
    • Vallino, J.J.1    Stephanopoulos, G.2
  • 29
    • 0028764687 scopus 로고
    • Linear constraint relations in biochemical reaction systems: I. Classification of the calculability and the balanceability of conversion rates
    • van der Heijden, R. T. J, M.; Heijnen, J. J.; Hellinga, C.; Romein, B.; Luyben, K. Ch.A. M. Linear constraint relations in biochemical reaction systems: I. Classification of the calculability and the balanceability of conversion rates. Biotechnol. Bioeng. 1994, 43, 3-10.
    • (1994) Biotechnol. Bioeng. , vol.43 , pp. 3-10
    • Van Der Heijden, R.T.J.M.1    Heijnen, J.J.2    Hellinga, C.3    Romein, B.4    Luyben, K.Ch.A.M.5
  • 30
    • 0028973161 scopus 로고
    • A metabolic network stoichiometry analysis of microbial growth and product formation
    • van Gulik, W. M.; Heijnen, J. J. A metabolic network stoichiometry analysis of microbial growth and product formation. Biotechnol. Bioeng. 1995, 48, 681-698.
    • (1995) Biotechnol. Bioeng. , vol.48 , pp. 681-698
    • Van Gulik, W.M.1    Heijnen, J.J.2
  • 33
    • 0028371138 scopus 로고
    • Predictions of oxygen supply control to enhance population stability of engineered production strains
    • Varma, A.; Palsson, B. O. Predictions of oxygen supply control to enhance population stability of engineered production strains. Biotechnol. Bioeng. 1994a, 43, 275-285.
    • (1994) Biotechnol. Bioeng. , vol.43 , pp. 275-285
    • Varma, A.1    Palsson, B.O.2
  • 34
    • 0028146781 scopus 로고
    • Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110
    • Varma, A.; Palsson, B. O. Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. Appl. Environ. Microbiol. 1994b, 60, 3724-3731.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 3724-3731
    • Varma, A.1    Palsson, B.O.2
  • 35
    • 0029635981 scopus 로고
    • Parametric sensitivity of stoichiometric flux balance models applied to wild-type Escherichia coli metabolism
    • Varma, A.; Palsson, B. O. Parametric sensitivity of stoichiometric flux balance models applied to wild-type Escherichia coli metabolism. Biotechnol. Bioeng. 1995, 45, 69-79.
    • (1995) Biotechnol. Bioeng. , vol.45 , pp. 69-79
    • Varma, A.1    Palsson, B.O.2
  • 36
    • 0027223982 scopus 로고
    • Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates
    • Varma, A.; Boesch, B. W.; Palsson, B. O. Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates. Appl. Environ. Microbiol. 1993, 59, 2465-2473.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 2465-2473
    • Varma, A.1    Boesch, B.W.2    Palsson, B.O.3
  • 38
    • 0014653084 scopus 로고
    • Energetics of the budding cycle of Saccharomyces cerevisiae during glucose limited aerobic growth
    • von Meyenburg, H. K. Energetics of the budding cycle of Saccharomyces cerevisiae during glucose limited aerobic growth. Arch. Mikrobiol. 1969, 66, 289-303.
    • (1969) Arch. Mikrobiol. , vol.66 , pp. 289-303
    • Von Meyenburg, H.K.1
  • 39
    • 0028036096 scopus 로고
    • Modeling of isotope distributions and intracellular fluxes in metabolic networks using atom mapping matrices
    • Zupke, C.; Stephanopoulos, G. Modeling of isotope distributions and intracellular fluxes in metabolic networks using atom mapping matrices. Biotechnol. Prog. 1994, 10, 489-498.
    • (1994) Biotechnol. Prog. , vol.10 , pp. 489-498
    • Zupke, C.1    Stephanopoulos, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.