PCR diagnosis of viral pneumonitis from fixed-lung tissue in children

Biochemical and Molecular Medicine

Volumn 58, Issue 1, 1996, Pages 66-76

  Akhtar, Noorullah ^a   Ni, Jiyuan ^a   Langston, Claire ^a   Demmler, Gail J ^a   Towbin, Jeffrey A ^a  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOVIRUS; ADOLESCENT; ADULT; ARTICLE; CHILD; CYTOMEGALOVIRUS; DIAGNOSTIC ACCURACY; ENTEROVIRUS; EPSTEIN BARR VIRUS; FETUS; HERPES SIMPLEX VIRUS; HUMAN; HUMAN TISSUE; LUNG BIOPSY; LUNG DISEASE; LUNG PARENCHYMA; NEWBORN; PNEUMONIA; POLYMERASE CHAIN REACTION; RETROSPECTIVE STUDY; SEROLOGY; VIRUS INFECTION;

EID: 0030175948     PISSN: 10773150     EISSN: None     Source Type: Journal    
DOI: 10.1006/bmme.1996.0034     Document Type: Article

References (35)

1. 1. Ketchum DG, Van Dyke RB. Viral pneumonia. In Pediatric Respiratory Disease, (Hillman BC, Ed.). Philadelphia: Saunders, 1993, pp 285-290.
2. 2. Henrickson KJ. Lower respiratory viral infections in immunocompetent children. Adv Pediatr Infect Dis 9: 59-96, 1994.
3. 3. Greenberg SB. Viral pneumonia. Inf Dis Clin North Am 5: 603-621, 1991.
4. 4. Feigin RD, Matson DO. The compromised host. In Textbook of Pediatric Infectious Diseases. (Feigin RD, Cherry JD, Eds.), 3rd ed. Philadelphia: Saunders, 1992, pp 960-989.
5. 5. Baselski VS, Wunderink RG. Bronchoscopic diagnosis of pneumonia. Clin Microbiol Rev 7: 533-558, 1994.
6. 6. Sokol DM, Demmler GJ. Rapid viral diagnosis. In Textbook of Pediatric Infectious Diseases (Feigin RD, Cherry JD, Eds.), 3rd ed. Philadelphia: Saunders, 1992, pp 2369-2394.
7. 7. Cherry JD, Miller MJ. Use of the virology laboratory. In Textbook of Pediatric Infectious Diseases (Feigin RD, Cherry JD, Eds.), 3rd ed. Philadelphia: Saunders, 1992, pp 2363-2369.
8. 8. Winn WC Jr, Walker DH. Viral infections. In Pulmonary Pathology. (Dail DH, Hammer SP, Eds.), 2nd ed. New York: Springer-Verlag, 1994, pp 429-464.
9. 9. Burgart LJ, Heller MJ, Reznicek MJ, Greiner TC, Teneyck CJ, Robinson RA. Cytomegalovirus detection in bone marrow transplant patients with idiopathic pneumonitis: A clinicopathologic study of the clinical utility of the polymerase chain reaction on open lung biopsy specimen tissue. Am J Clin Pathol 96: 572-576, 1991.
10. 10. Persons DL, Moore JA, Fishback JL. Comparison of polymerase chain reaction, DNA hybridization, and histology with viral culture to detect cytomegalovirus in immunosuppressed patients. Mod Pathol 4: 149-153, 1991.
11. 11. Einsele HM, Steidle M, Vallbracht A, Saal JG, Ehninger G, Muller CA. Early occurrence of human cytomegalovirus infection after bone marrow transplantation as demonstrated by the polymerase chain reaction technique. Blood 77: 1104-1110, 1991.
12. 12. Myerson D, Lingenfelter PA, Gleaves CA, Meyers JD, Bowden RA. Diagnosis of cytomegalovirus pneumonia by the polymerase chain reaction with archived frozen lung tissue and bronchoalveolar lavage fluid. Am J Clin Pathol 100: 407-413, 1993.
13. 13. Cone RW, Hackman RC, Huang M-LW, Bowden RA, Meyers JD, Metcalf M, Zeh J, Ashley R, Corey L. Human herpes virus 6 in lung tissue from patients with pneumonitis after bone marrow transplantation. N Engl J Med 329: 156-161, 1993.
14. 14. Jevon GP, Langston C. The contribution of PCR to the diagnosis of lung disease with non-specific histology. Mod Pathol 7: 4P, 1994.
15. 15. Allard A, Girones R, Juto P, Wadell G. Polymerase chain reaction for detection of adenovirus in stool samples. J Clin Microbiol 322: 2659-2667, 1990.
16. 16. Shibata M, Morishama T, Terashima M, Kimura H, Kuzushima K, Hanada N, Nishikawa K, Watanabe K. Human cytomegalovirus during childhood: detection of viral DNA in peripheral blood by means of polymerase chain reaction. Med Microbiol Immunol 179: 245-253, 1990.
17. 17. Chapman NM, Tracy S, Gauntt, CJ, Fortmueller U. Molecular detection and identification of enteroviruses using enzymatic amplification and nucleic acid hybridization. J Clin Microbiol 28: 843-850, 1990.
18. 18. Piiparinen H, Vaheri A. Genotyping of herpes simplex viruses by polymerase chain reaction. Arch Virol 119: 275-283, 1991.
19. 19. Rogers BB, Alpert LC, Hine EA, Buffone GJ. Analysis of DNA in fresh and fixed tissue by the polymerase chain reaction. Am J Pathol 136: 541-548, 1990.
20. 20. Southern EM. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98: 503-517, 1975.
21. 21. Feinberg AP, Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132: 6-13, 1983.
22. 22. Kusukawa N, Vernor T, Asada K, Kato I. Rapid and reliable protocol for direct sequencing of material amplified by the polymerase chain reaction. BioTechniques 9: 66-72, 1990.
23. 23. Chomczynski P, Sacchi N. Single-step method of RNA isolation by gnanidium thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159, 1987.
24. 24. Rotbart HA. PCR amplification of enteroviruses. In PCR Protocols: A Guide to Methods and Applications (Innis MA, Gelfand DH, Sninsky JJ, White TJ, Eds.). New York: Academic Press, 1990, pp 372-377.
25. 25. Yamamoto LJ, Tedder DG, Ashley R, Levin MJ. Herpes simplex virus type I DNA in cerebrospinal fluid of a patient with Mollaret's meningitis. N Engl J Med 325: 1082-1085, 1991.
26. 26. Demmler GJ, Buffone GJ, Schimbor CM, May RA. Detection of cytomegalovirus in urine from newborns by using polymerase chain reaction DNA amplification. J Infect Dis 158: 1177-1184, 1988.
27. 27. Cassol SA, Pon M-C, Pal R. Primer-mediated enzymatic amplification of cytomegalovirus (CMV) DNA: Application to the early diagnosis of CMV infection in bone marrow transplant recipients. J Clin Invest 83: 1109-1115, 1989.
28. 28. Jiwa NM, Van Gamert GW, Raap AK. Rapid detection of human cytomegalovirus DNA in peripheral blood leukocytes of viremic transplant recipients by the polymerase chain reaction. Transplantation 48: 72-76, 1989.
29. 29. Towbin JA, Griffin LD, Martin AB, Nelson S, Siu B, Ayres NA, Demmler G, Moise KJ Jr, Zhang Y-H. Intrauterine adenoviral myocarditis presenting as non-immune hydrops fetalis: Diagnosis by polymerase chain reaction. Pediatr Infect Dis J 13: 144-150, 1994.
30. 30. Martin AB, Webber S, Fricker FJ, Jaffe R, Demmler G, Kearney D, Zhang Y-H, Bodurtha J, Gelb B, Ni J, Bricker JT, Towbin JA. Acute myocarditis: Rapid diagnosis by PCR in Children. Circulation 90: 330-339, 1994.
31. 31. Griffin LD, Kearney D, Ni J, Jaffe R, Fricker FJ, Webber S, Demmler G, Gelb BD, Towbin JA. Analysis of formalin-fixed and frozen myocardial autopsy samples for viral genome in childhood myocarditis and dilated cardiomyopathy with endocardial fibroelastosis using polymerase chain reaction (PCR). Cardiovasc Pathol 4: 3-11, 1995.
32. 32. Metcalf JP, Monick MM, Stinski MF, Hunninghake GW. Adenovirus E1A 13S gene product up-regulates the cytomegalovirus major immediate early promoter. Am J Respir Cell Mol Biol 10: 448-452, 1994.
33. 33. Bateman ED, Hayashi S, Kuwano K, Wilke TA, Hogg JC. Latent adenoviral infection in follicular bronchiectasis. Am J Respir Crit Care Med 151: 170-176, 1995.
34. 34. Macek V, Sorli J, Kopriva S, Marin J. Persistent adenoviral infection and chronic airway obstruction in children. Am J Respir Care Med 150: 7-10, 1994.
35. 35. Matsuse T, Hayashi S, Kuwano K, Keunecke H, Jefferies WA, Hogg JC. Latent adenoviral infection in the pathogenesis of chronic airways obstruction. Am Rev Respir Dis 146: 177-184, 1992.