Simulations of chaperone-assisted folding

Biochemistry

Volumn 35, Issue 1, 1996, Pages 334-339

  Sfatos, C D ^a   Gutin, A M ^a   Abkevich, V I ^a   Shakhnovich, E I ^a  

^a HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHAPERONE;

AMINO ACID SEQUENCE; ARTICLE; EVOLUTION; MOLECULAR INTERACTION; PRIORITY JOURNAL; PROTEIN DENATURATION; PROTEIN FOLDING;

AMINO ACID SEQUENCE; CHAPERONINS; COMPUTER SIMULATION; GROEL PROTEIN; GROES PROTEIN; KINETICS; MATHEMATICS; MOLECULAR SEQUENCE DATA; MONTE CARLO METHOD; PEPTIDES; PROTEIN FOLDING; STRUCTURE-ACTIVITY RELATIONSHIP; TIME FACTORS;

EID: 0030067983     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi952033a     Document Type: Article

References (32)

1. Abkevich, V. I., Gutin, A. M., & Shakhnovich, E. I. (1994a) J. Chem. Phys. 101, 6052-6062.
2. Abkevich, V. I., Gutin, A. M., & Shakhnovich, E. I. (1994b) Biochemistry 33, 10026-10036.
3. Anfinsen, C. B. (1973) Science 181, 223-230.
4. Boshkareva, E. S., Lissin, N. M., & Girshovich, A. S. (1988) Nature 336, 254-257.
5. Bowie, J. U., Luthy, R., & Eisenberg, D. (1991) Science 253, 164-170.
6. Buchner, J., Schmidt, M., Fuchs, M., Jaenicke, R., Rudolph, R., Schmid, F. X., & Kiefhaber, T. (1991) Biochemistry 30, 1586-1591.
7. Bycroft, M., Matouschek, A , Kellis J., Serano, & Fersht, A. (1990) Nature 346, 488-490.
8. Chan, H. S., & Dill, K. A. (1995) Proteins (in press).
9. Ellis, R. J., Laskey, R. A., & Lorimer, G. H., Eds. (1993) Molecular Chaperones, Chapman and Hall, London.
10. Gething, M. J., & Sambrook, J. (1992) Nature 355, 33-45.
11. Goloubinoff, P., Christeller, J. T., Gatenby, A. A., & Lorimer, G. H. (1989) Nature 342, 884-889.
12. Gulukota, K., & Wolynes, P. G. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 9292-9296.
13. Guo, Z. Y., & Thirumalai, D. (1995) Biopolymers 35, 137-140.
14. Hendrick, J. P., & Hartl, F.-U. (1993) Annu. Rev. Biochem. 62, 349-384.
15. Hopfield, J. J. (1974) Proc. Natl. Acad. Sci. U.S.A. 71, 4135-4139.
16. Jackson, G. S., Staniforth, R. A., Halsall, D. J., Atkinson, T., Holbbrook, J. J., Clarke, A. R., Burston, S. G. (1993) Biochemistry 32, 2554-2563.
17. Landry, S. J., Jordan, R., McMaken, R., & Gierasch, L. M. (1992) Nature 355, 455-457.
18. Martin, J., Lange, T., Boteva, R., Schramel, A., Horwich, A. L., & Hartl, F.-U. (1991) Nature 352, 36-42.
19. Mendoza, J. A., Rogers, E., Lorimer, G. H., & Horowich, P. M. (1991) J. Biol. Chem. 266, 13044-13049.
20. Miyazawa, S., & Jernigan, R. (1985) Macromolecules 18, 534-552 (Table VI).
21. Radford, S., Dobson, C., & Evans, P. (1992) Nature 358, 302-307.
22. Saibil, H., Dong, Z., Wood, S., & auf der Mauer, A. (1991) Nature 353, 25-26.
23. Sali, A., Shakhnovich, E. I., & Karplus, M. (1994) J. Mol. Biol. 235, 1614-1636.
24. Shakhnovich, E. I., & Gutin, A. M. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 7195-7199.
25. Socci, N. D., & Onuchic, J. N. (1994) J. Chem. Phys. 101, 1519-1528.
26. Tandon, S., & Horowich, P. M. (1989) J. Biol. Chem. 264, 9859-9866.
27. Thirumalai, D. (1994) Statistical Mechanics, Protein Structure, and Protein-Substrate Interactions (Doniach, S., Ed.) Plenum, New York.
28. Todd, M. J., Viitanen, P. V., & Lorimer, G. H. (1994) Science 265, 659-666.
29. Todd, M. J., Thirumalai, D., & Lorimer, G. H. (1995) Proc. Natl. Acad. Sci. U.S.A. (in press).
30. Udgaonkar, J. B., & Baldwin, R. L. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 8197-8201.
31. Viitanen, P. V., Donaklson, G. K., Lorimer, G. H., Lubben, T. H., & Gatenby, A. A. (1991) Biochemistry 30, 9716-9723.
32. Weissman, J. S., Kashi, Y., Fenton, W. A., & Horwich, A. L. (1994) Cell 78, 693-702.