-
1
-
-
0001089701
-
Molecular dynamics simulation of water near walls using an improved wall-water interaction potential
-
Barabino, G., C. Gavotti, and M. Marchesi. 1984. Molecular dynamics simulation of water near walls using an improved wall-water interaction potential. Chem. Phys. Lett. 104:478-484.
-
(1984)
Chem. Phys. Lett.
, vol.104
, pp. 478-484
-
-
Barabino, G.1
Gavotti, C.2
Marchesi, M.3
-
2
-
-
0000325194
-
Molecular dynamics simulations of TTPS2 water restricted by a spherical hydrophobic boundary
-
Belch, A. C., and M. Berkowitz. 1985. Molecular dynamics simulations of TTPS2 water restricted by a spherical hydrophobic boundary. Chem. Phys. Lett. 113:278-282.
-
(1985)
Chem. Phys. Lett.
, vol.113
, pp. 278-282
-
-
Belch, A.C.1
Berkowitz, M.2
-
4
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimisation, and dynamics calculations
-
Brooks, B. R., R. E. Bruccoleri, B. D. Olafson, D. J. States, S. Swaminathan, and M. Karplus. 1983. CHARMM: a program for macromolecular energy, minimisation, and dynamics calculations. J. Comp. Chem. 4:187-217.
-
(1983)
J. Comp. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
5
-
-
0025895720
-
Time-correlation analysis of simulated water motion in flexible and rigid gramicidin channels
-
Chiu, S. W., E Jakobsson, S. Subramanian, and J. A. McCammon. 1991. Time-correlation analysis of simulated water motion in flexible and rigid gramicidin channels. Biophvs. J. 60:273-285.
-
(1991)
Biophvs. J.
, vol.60
, pp. 273-285
-
-
Chiu, S.W.1
Jakobsson, E.2
Subramanian, S.3
McCammon, J.A.4
-
6
-
-
0027466002
-
The nature of ion and water barrier crossings in a simulated ion channel
-
Chiu, S. W., J. A. Novotny, and E. Jakobsson. 1993. The nature of ion and water barrier crossings in a simulated ion channel. Biaphys. J. 64: 98-109.
-
(1993)
Biaphys. J.
, vol.64
, pp. 98-109
-
-
Chiu, S.W.1
Novotny, J.A.2
Jakobsson, E.3
-
7
-
-
33749224012
-
Molecular transport in liquids and gases
-
Cohen, M. H., and D. Turnbull. 1959. Molecular transport in liquids and gases. J. Chem. Phys. 31:1164-1169.
-
(1959)
J. Chem. Phys.
, vol.31
, pp. 1164-1169
-
-
Cohen, M.H.1
Turnbull, D.2
-
8
-
-
0026779245
-
Crystal structures explain functional properties of two E. coli porins
-
Cowan, S. W., T. Schirmer, G. Rummel, M. Steiert, R. Ghosh, R. A. Pauptit, J. N. Jansonius, and J. P. Rosenbusch. 1992. Crystal structures explain functional properties of two E. coli porins. Nature (London). 358:727-733.
-
(1992)
Nature (London)
, vol.358
, pp. 727-733
-
-
Cowan, S.W.1
Schirmer, T.2
Rummel, G.3
Steiert, M.4
Ghosh, R.5
Pauptit, R.A.6
Jansonius, J.N.7
Rosenbusch, J.P.8
-
9
-
-
0027256738
-
Realistic simulations of native-protein dynamics in solution and bevond
-
Daggett, V., and M. Levitt. 1993. Realistic simulations of native-protein dynamics in solution and bevond. Annu. Rev. Biophys. Biomol. Struct. 22:353-380.
-
(1993)
Annu. Rev. Biophys. Biomol. Struct.
, vol.22
, pp. 353-380
-
-
Daggett, V.1
Levitt, M.2
-
10
-
-
0025013784
-
Diffusion and kinetic approaches to describe permeation in ionic channels
-
Dani, J. A., and D. G. Levitt. 1990. Diffusion and kinetic approaches to describe permeation in ionic channels. J. Theor. Biol. 146:289-301.
-
(1990)
J. Theor. Biol.
, vol.146
, pp. 289-301
-
-
Dani, J.A.1
Levitt, D.G.2
-
12
-
-
0028170113
-
The aquaporin family of membrane water channels
-
Engel. A., T. Walz, and P. Agre. 1994. The aquaporin family of membrane water channels. Curr. Opin. Struct. Biol. 4:545-553.
-
(1994)
Curr. Opin. Struct. Biol.
, vol.4
, pp. 545-553
-
-
Engel, A.1
Walz, T.2
Agre, P.3
-
13
-
-
0000728761
-
Motions and relaxations of confined liquids
-
Granick, S. 1991. Motions and relaxations of confined liquids. Science. 253:1374-1379.
-
(1991)
Science
, vol.253
, pp. 1374-1379
-
-
Granick, S.1
-
14
-
-
0000123750
-
Monte-Carlo simulations of the effects of charges on water and ions in a tapered pore
-
Green, M. E., and J. Lu. 1995. Monte-Carlo simulations of the effects of charges on water and ions in a tapered pore. J. Coll. Interface Sci. 171:117-126.
-
(1995)
J. Coll. Interface Sci.
, vol.171
, pp. 117-126
-
-
Green, M.E.1
Lu, J.2
-
16
-
-
0001549670
-
Monte Carlo simulations of liquid water between two rigid walls
-
Jonsson, B. 1981. Monte Carlo simulations of liquid water between two rigid walls. Chem. Phys. Lett. 82:520-525.
-
(1981)
Chem. Phys. Lett.
, vol.82
, pp. 520-525
-
-
Jonsson, B.1
-
17
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen, W. L., J. Chandresekhar, J. D. Madura, R. W. Impey, and M. L. Klein. 1983. Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79:926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandresekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
18
-
-
0028000828
-
Electrostatic properties of two porin channels from Escherichia coli
-
Karshikoff, A., V. Spassov, S. W. Cowan, R. Ladenstein, and T. Schirmer. 1994. Electrostatic properties of two porin channels from Escherichia coli. J. Mol. Biol. 240:372-384.
-
(1994)
J. Mol. Biol.
, vol.240
, pp. 372-384
-
-
Karshikoff, A.1
Spassov, V.2
Cowan, S.W.3
Ladenstein, R.4
Schirmer, T.5
-
19
-
-
0028070549
-
Parallei helix bundles and ion channels: Molecular modeling via simulated annealing and restrained molecular dynamics
-
Kerr, I. D., R. Sankarararmakrishnan, O. S. Smart, and M. S. P. Sansom. 1994. Parallei helix bundles and ion channels: molecular modeling via simulated annealing and restrained molecular dynamics. Biophvs. J. 67:1501-1515.
-
(1994)
Biophvs. J.
, vol.67
, pp. 1501-1515
-
-
Kerr, I.D.1
Sankarararmakrishnan, R.2
Smart, O.S.3
Sansom, M.S.P.4
-
20
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis, P. J 1991. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl Cryst. 24:946-950.
-
(1991)
J. Appl Cryst.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
21
-
-
0028153088
-
Refined structure of the porin from Rhodobacter blastica
-
Kreusch, A., and G. E. Schulz. 1994. Refined structure of the porin from Rhodobacter blastica. J. Mol Biol. 243:891-905.
-
(1994)
J. Mol Biol.
, vol.243
, pp. 891-905
-
-
Kreusch, A.1
Schulz, G.E.2
-
22
-
-
0023907575
-
Synthetic amphiphilic peptide models for protein ion channels
-
Lear, J. D., Z. R. Wasserman, and W. F. DeGrado. 1988. Synthetic amphiphilic peptide models for protein ion channels. Science 240: 1177-1181.
-
(1988)
Science
, vol.240
, pp. 1177-1181
-
-
Lear, J.D.1
Wasserman, Z.R.2
DeGrado, W.F.3
-
23
-
-
36549099780
-
The structure of liquid water at an extended hydrophobic surface
-
Lee, C. Y., J. A McCammon., and P. J. Rossky. 1984. The structure of liquid water at an extended hydrophobic surface. J. Chem. Phys. 80: 4448-4455.
-
(1984)
J. Chem. Phys.
, vol.80
, pp. 4448-4455
-
-
Lee, C.Y.1
McCammon, J.A.2
Rossky, P.J.3
-
24
-
-
0001045078
-
Molecular dynamics simulation of liquid water between two walls
-
Marchesi, M. 1983. Molecular dynamics simulation of liquid water between two walls. Chem Phys. Lett. 97:224-230.
-
(1983)
Chem Phys. Lett.
, vol.97
, pp. 224-230
-
-
Marchesi, M.1
-
25
-
-
33845790250
-
Molecular dynamics study of liquid water
-
Rahman, A., and F. H. Stillinger. 1971. Molecular dynamics study of liquid water. J. Chem. Phys. 55:3336-3359.
-
(1971)
J. Chem. Phys.
, vol.55
, pp. 3336-3359
-
-
Rahman, A.1
Stillinger, F.H.2
-
26
-
-
0002267286
-
Structure and dynamics of water at interfaces
-
Rossky, P. J., and S. H. Lee. 1989. Structure and dynamics of water at interfaces. Chem. Scr 29A:93-95.
-
(1989)
Chem. Scr
, vol.29 A
, pp. 93-95
-
-
Rossky, P.J.1
Lee, S.H.2
-
27
-
-
0028854587
-
Extended dipolar chain model for ion channels: Electrostriction effects and the translocational energy barrier
-
Sancho, M., M. B. Partenskii, V. Dorman, and P. C. Jordan. 1995. Extended dipolar chain model for ion channels: electrostriction effects and the translocational energy barrier. Biophys. J. 68:427-433.
-
(1995)
Biophys. J.
, vol.68
, pp. 427-433
-
-
Sancho, M.1
Partenskii, M.B.2
Dorman, V.3
Jordan, P.C.4
-
28
-
-
0029278634
-
Twist to open
-
Sansom, M. S. P. 1995. Twist to open. Curr. Biol. 5:373-375.
-
(1995)
Curr. Biol.
, vol.5
, pp. 373-375
-
-
Sansom, M.S.P.1
-
29
-
-
0029124070
-
Transbilayer pores formed by β-barrels: Molecular modeling of pore structures and properties
-
Sansom, M. S. P., and I. D. Kerr. 1995. Transbilayer pores formed by β-barrels: molecular modeling of pore structures and properties. Biophys. J. 69:1334-1343
-
(1995)
Biophys. J.
, vol.69
, pp. 1334-1343
-
-
Sansom, M.S.P.1
Kerr, I.D.2
-
31
-
-
36449000102
-
Network defects and molecular mobility in liquid water
-
Sciortino, F., A. Geiger, and H. E. Stanley. 1992. Network defects and molecular mobility in liquid water. J. Chem. Phys. 96:3857-3865.
-
(1992)
J. Chem. Phys.
, vol.96
, pp. 3857-3865
-
-
Sciortino, F.1
Geiger, A.2
Stanley, H.E.3
-
32
-
-
0025896727
-
Water protein interactions: Theory and experiment
-
Teeter, M. M. 1991. Water protein interactions: theory and experiment. Ann. Rev: Biophys. Biophys. Chem. 20:577-600.
-
(1991)
Ann. Rev: Biophys. Biophys. Chem.
, vol.20
, pp. 577-600
-
-
Teeter, M.M.1
-
33
-
-
0024848780
-
The structure of ion channels in membranes of excitable cells
-
Unwm, N. 1989. The structure of ion channels in membranes of excitable cells. Neuron. 3:665-676.
-
(1989)
Neuron
, vol.3
, pp. 665-676
-
-
Unwm, N.1
-
34
-
-
0027506299
-
Nicotinic acetylcholine receptor at 9 Å resolution
-
Unwin, N. 1993. Nicotinic acetylcholine receptor at 9 Å resolution. J Mol. Biol. 229.1101-1124.
-
(1993)
J Mol. Biol.
, vol.229
, pp. 1101-1124
-
-
Unwin, N.1
-
35
-
-
0028921479
-
Acetylcholine receptor channel imaged in the open state
-
Unwin, N. 1995. Acetylcholine receptor channel imaged in the open state. Nature (London). 373:37-43.
-
(1995)
Nature (London)
, vol.373
, pp. 37-43
-
-
Unwin, N.1
-
37
-
-
0026737314
-
Structure of porin refined at 1.8A resolution
-
Weiss, M. S., and G. E. Schulz. 1992. Structure of porin refined at 1.8A resolution. J. Mol. Biol. 227:493-509.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 493-509
-
-
Weiss, M.S.1
Schulz, G.E.2
-
38
-
-
0001143768
-
Molecular dynamics simulations of water in a spherical cavity
-
Zhang, L., H. T. Davis, D. M. Kroll, and H. S. White. 1995. Molecular dynamics simulations of water in a spherical cavity. J. Phys. Chem. 99.2878-2884.
-
(1995)
J. Phys. Chem.
, vol.99
, pp. 2878-2884
-
-
Zhang, L.1
Davis, H.T.2
Kroll, D.M.3
White, H.S.4
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