Human ESP1/CRP2, a member of the LIM domain protein family: Characterization of the cDNA and assignment of the gene locus to chromosome 14q32.3

Genomics

Volumn 31, Issue 2, 1996, Pages 167-176

  Karim, Mohammad Azharul ^a   Ohta, Kohji ^a   Egashira, Masayuki ^b   Jinno, Yoshihiro ^b   Niikawa, Norio ^b   Matsuda, Ichiro ^a   Indo, Yasuhiro ^a  

^a KUMAMOTO UNIV SCHOOL OF MEDICINE   (Japan)

^b NAGASAKI UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID METABOLISM; AMINO ACID SEQUENCE; ARTICLE; CHROMOSOME 14Q; DNA LIBRARY; GENE EXPRESSION; GENE LOCUS; HUMAN; HUMAN CELL; HYBRID CELL; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FAMILY; SOMATIC CELL GENETICS;

RODENTIA;

EID: 0030065287     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.0028     Document Type: Article

References (47)

1. Arber, S., Halder, G., and Caroni, P. (1994). Muscle LIM protein, a novel essential regulator of myogenesis, promotes myogenic differentiation. Cell 79: 221-231.
2. Archer, V. E. V., Breton, J., Sanchez-Garcia, I., Osada, H., Forster, A., Thomson, A. J., and Rabbitts, T. H. (1994). Cysteine-rich LIM domains of LIM-homeodomain and LIM-only proteins contain zinc but not iron. Proc. Natl. Acad. Sci. USA 91: 316-320.
3. Birkenmeier, E. H., and Gordon, J. I. (1986). Developmental regulation of a gene that encodes a cysteine-rich intestinal protein and maps near the murine immunoglobulin heavy chain locus. Proc. Natl. Acad. Sci. USA 83: 2516-2520.
4. Birnstiel, M. L., Busslingers, M., and Strub, K. (1985). Transcriptional termination and 3′ processing: The end is in site. Cell 41: 349-359.
5. Boehm, T., Foroni, L., Kaneko, Y., Perutz, M. F., and Rabbitts, T. H. (1991). The rhombotin family of cysteine-rich LIM-domain oncogenes: Distinct members are involved in T-cell translocations to human chromosomes 11p15 and 11p13. Proc. Natl. Acad. Sci. USA 88: 4367-4371.
6. Boehm, T., Greenberg, J. M., Buluwela, L., Lavenir, I., Forster, A., and Rabbitts, T. H. (1990). An unusual structure of a putative T cell oncogene which allows production of similar proteins from distinct mRNAs. EMBO J. 9: 857-868.
7. Boehm, T., and Rabbitts, T. H. (1989). A chromosomal basis of lymphoid malignancy in man. Eur. J. Biochem. 185: 1-17.
8. Bourgouin, C., Lundgren, S. E., and Thomas, J. B. (1992). Apterous is a Drosophila LIM domain gene required for the development of a subset of embryonic muscles. Neuron 9: 549-561.
9. Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
10. Cohen, B., McGuffin, M. E., Pfeifle, C., Segal, D., and Cohen, S. M. (1992). Apterous, a gene required for imaginal disc development in Drosophila encodes a member of the LIM family of developmental regulatory proteins. Genes Dev. 6: 715-729.
11. Crawford, A. W., Pino, J. D., and Beckerle, M. C. (1994). Biochemical and molecular characterization of the chicken cysteine-rich protein, a developmentally regulated LIM-domain protein that is associated with the actin cytoskeleton. J. Cell Biol. 124: 117-127.
12. Dayhoff, M. O., Barker, W. C., and Hunt, L. T. (1983). Establishing homologies in protein sequences. In "Methods in Enzymology" (C. H. W. Hirs and S. N. Timasheff, Eds.), Vol. 91, pp. 524-545, Academic Press, New York.
13. Ericson, J., Thor, S., Edlund, T., Jessell, T. M., and Yamada, T. (1992). Early stages of motor neuron differentiation revealed by expression of homeobox gene Islet-1. Science 256: 1555-1560.
14. Foroni, L., Boehm, T., White, L., Forster, A., Sherrington, P., Liao, X. B., Brannan, C. I., Jenkins, N. A., Copeland, N. G., and Rabbitts, T. H. (1992). The rhombotin gene family encode related LIM-domain proteins whose differing expression suggests multiple roles in mouse development. J. Mol. Biol. 226: 747-761.
15. Freyd, G., Kim, S. K., and Horvitz, H. R. (1990). Novel cysteine-rich motif and homeodomain in the product of the Caenorhabditis elegans cell lineage gene lin-II. Nature 344: 876-879.
16. Fukumoto, H., Seino, S., Imura, H., Seino, Y., Eddy, R. L., Fukushima, Y., Byers, M. G., Shows, T. B., and Bell, G. I. (1988). Sequence, tissue distribution, and chromosomal localization of mRNA encoding a human glucose transporter-like protein. Proc. Natl. Acad. Sci. USA 85: 5434-5438.
17. German, M. S., Wang, J., Chadwick, R. B., and Rutter, W. J. (1992). Synergistic activation of insulin gene by a LIM-homeodomain protein and a basic helix-loop-helix protein: Building a functional insulin minienhancer complex. Genes Dev. 6: 2165-2176.
18. Hempe, J. M., and Cousins, R. J. (1991). Cysteine-rich intestinal protein binds zinc during transmucosal zinc transport. Proc. Natl. Acad. Sci. USA 88: 9671-9674.
19. Holton, T. A., and Graham, M. W. (1991). A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors. Nucleic Acids Res. 19: 1156.
20. Karlsson, O., Thor, S., Norberg, T., Ohlsson, H., and Edlund, T. (1990). Insulin gene enhancer binding protein Is1-1 is a member of a novel class of proteins containing both a homeo- and a Cys-His domain. Nature 344: 879-882.
21. Kosa, J. L., Michelsen, J. W., Louis, H. A., Olsen, J. I., Davis, D. R., Beckerle, M. C., and Winge, D. R. (1994). Common metal ion coordination in LIM domain proteins. Biochemistry 33: 468-477.
22. Kozak, M. (1984). Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs. Nucleic Acids Res. 12: 857-872.
23. Liebhaber, S. A., Emery, J. G., Urbanek, M., Wang, X., and Cooke, N. E. (1990). Characterization of a human cDNA encoding a widely expressed and highly conserved cysteine-rich protein with an unusual zinc-finger motif. Nucleic Acids Res. 18: 3871-3879.
24. McGuire, E. A., Hockett, R. D., Pollock, K. M., Bartholdi, M. F., O'Brien, S. J., and Korsmeyer, S. J. (1989). The t(11;14)(p15;q11) in a T-cell lymphoblastic leukemia cell line activates multiple transcripts, including Ttg-1, a gene encoding a potential zinc finger protein. Mol. Cell. Biol. 9: 2124-2132.
25. McKusick, V. A. (1994). "Mendelian Inheritance in Man: A Catalog of Human Genes and Genetic Disorders," 11th ed., p. 391, The Johns Hopkins Univ. Press, Baltimore, MD.
26. Michelsen, J. W., Schmeichel, K. L., Beckerle, M. C., and Winge, D. R. (1993). The LIM motif defines a specific zinc-binding protein domain. Proc. Natl. Acad. Sci. USA 90: 4404-4408.
27. Nacheava, E., Dyer, M. J. S., Fischer, P., Stranks, G., Heward, J. M., Marcus, R. E., Grace, C., and Karpas, A. (1993). c-myc translocation in de novo B-cell lineage acute leukemias with t(14;18) (cell lines Karpas 231 and 353). Blood 82: 231-240.
28. Nalik, P., Panayotova-Heiermann, M., and Pongs, O. (1989). Characterization of an estradiol-stimulated mRNA in the brain of adult male rats. Mol. Cell. Endocrinol. 62: 235-242.
29. Ohta, T., Tohma, T., Soejima, H., Fukushima, Y., Nagai, T., Yoshiura, K., Jinno, Y., and Niikawa, N. (1993). The origin of cytologically unidentifiable chromosome abnormalities: Six cases ascertained by targeted chromosome-band painting. Hum. Genet. 92: 1-5.
30. Okano, I., Yamamoto, T., Kaji, A., Kimura, T., Mizuno, K., and Nakamura, T. (1993). Cloning of CRP2, a novel member of the cysteine-rich protein family with two repeats of an unusual LIM/double zinc-finger motif. FEBS Lett. 333: 51-55.
31. Perez-Alvarado, G. C., Miles, C., Michelsen, J. W., Louis, H. A., Winge, D. R., Beckerle, M. C., and Summers, M. F. (1994). Structure of the carboxy-terminal LIM domain from the cysteine rich protein CRP. Nature Struct. Biol. 1: 388-398.
32. Rabbitts, T. H. (1994). Chromosomal translocations in human cancer. Nature 372: 143-149.
33. Royer-Pokora, B., Loos, U., and Ludwig, W.-D. (1991). TTG-2, a new gene encoding a cysteine-rich protein with the LIM motif, is overexpressed in acute T-cell leukaemia with the t(11;14)(p13;q11). Oncogene 6: 1887-1893.
34. Sadler, I., Crawford, A. W., Michelsen, J. W., and Beckerle, M. C. (1992). Zyxin and cCRP: Two interactive LIM domain proteins associated with the cytoskeleton. J. Cell Biol. 119: 1573-1587.
35. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). "Molecular Cloning: A Laboratory Manual," pp. 9.14-9.23, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
36. Sanchez-Garcia, I., and Rabbitts, T. H. (1993). LIM domain proteins in leukaemia and development. Semin. Cancer Biol. 4: 349-358.
37. Sanger, F., Nicklen, S., and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463-5467.
38. Schmeichel, K. L., and Beckerle, M. C. (1994). The LIM domain is a modular protein-binding interface. Cell 79: 211-219.
39. Shaw, G., and Kamen, R. (1986). A conserved AU sequence from the 3′ untranslated region of GM-CSF mRNA mediates selective mRNA degradation. Cell 46: 659-667.
40. Shawlot, W., and Behringer, R. R. (1995). Requirement for Lim1 in head-organizer function. Nature 374: 425-430.
41. Taira, M., Jamrich, M., Good, P. J., and Dawid, I. B. (1992). The LIM domain containing homeo box Xlim-1 is expressed specifically in the organizer region of Xenopus gastrula embryos. Genes Dev. 6: 356-366.
42. Tsui, S. K. W., Yam, N. Y. H. , Lee, C. Y., and Waye, M. M. Y. (1994). Isolation and characterization of a cDNA that encodes for a LIM-containing protein which is developmentally regulated in heart. Biochem. Biophys. Res. Commun. 205: 497-505.
43. Wang, X., Lee, G., and Liebhaber, S. A. (1992a). Human cysteine-rich protein: A member of the LIM/double-finger family displaying coordinate serum induction. J. Biol. Chem. 267: 9176-9184.
44. Wang, X., Ray, K., Szpirer, J., Levan, G., Liebhaber, S. A., and Cooke, N. E. (1992b). Analysis of the human cysteine-rich protein gene (CSRP), assignment to chromosome 1q24-1q32, and identification of an associated MSPI polymorphism. Genomics 14: 391-397.
45. Warren, A. J., Colledge, W. H., Carlton, M. B. L., Evans, M. J., Smith, A. J. H., and Rabbitts, T. H. (1994). The oncogenic cysteine-rich LIM domain protein Rbtn2 is essential for erythroid development. Cell 78: 45-57.
46. Way, J. C., and Chalfie, M. (1988). mec-3, a Homeobox-containing gene that specifies differentiation of the touch receptor neurons in C. elegans. Cell 54: 5-16.
47. Xu, Y., Baldassare, M., Fisher, P., Rathbun, G., Oltz, E. M., Yancopoulos, G. D., Jessell, T. M., and Alt, F. W. (1993). LH-2: A LIM/ homeodomain gene expressed in developing lymphocytes and neural cells. Proc. Natl. Acad. Sci. USA 90: 227-231.