Ligand recognition by anti-DNA autoantibodies. Affinity, specificity, and mode of binding

Biochemistry

Volumn 35, Issue 5, 1996, Pages 1624-1633

  Swanson, Patrick C ^a   Ackroyd, Christine ^a   Glick, Gary D ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOANTIBODY; DNA ANTIBODY; DOUBLE STRANDED DNA; LIGAND; SINGLE STRANDED DNA;

ANIMAL CELL; ANIMAL TISSUE; ANTIBODY SPECIFICITY; ANTIGEN BINDING; ANTIGEN RECOGNITION; ARTICLE; AUTOIMMUNITY; KIDNEY INJURY; MOUSE; NONHUMAN; PRIORITY JOURNAL; SYSTEMIC LUPUS ERYTHEMATOSUS;

ANIMALS; ANTIBODIES, ANTINUCLEAR; ANTIBODIES, MONOCLONAL; ANTIBODY AFFINITY; ANTIBODY SPECIFICITY; ANTIGEN-ANTIBODY REACTIONS; BASE SEQUENCE; BINDING SITES, ANTIBODY; DNA; DNA FOOTPRINTING; EPITOPES; FEMALE; LIGANDS; LUPUS ERYTHEMATOSUS, SYSTEMIC; MICE; MOLECULAR SEQUENCE DATA; OLIGODEOXYRIBONUCLEOTIDES;

ANIMALIA;

EID: 0030063744     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9516788     Document Type: Article

References (85)

1. Andrzejewski, C., Jr., Rauch, J., Lafer, E., Stollar, B. D., & Schwartz, R. S. (1981) J. Immunol. 126, 226.
2. Arnott, S. (1970) Prog. Biophys. Mol. Biol. 21, 265.
3. Ballard, D. W., Lynn, S. P., Gardner, J. F., & Voss, E. W., Jr. (1984) J. Biol. Chem. 259, 3492.
4. Barry, M. M., Mol, C. D., Anderson, W. F., & Lee, J. S. (1994) J. Biol. Chem. 269, 3623.
5. Ben-Chetrit, E., Eilat, D., & Ben-Sasson, S. A. (1988) Immunology 65, 479.
6. Braun, R. P., & Lee, J. S. (1986) Nucleic Acids Res. 14, 5049.
7. Braun, R. P., & Lee, J. S. (1987) J. Immunol. 139, 175.
8. Brinkman, K., Termaat, R., Berden, J. H., & Smeenk, R. J. (1990) Immunol. Today 11, 232.
9. Carey, J. (1991) Methods Enzymol. 208, 103.
10. Chmielewski, J., & Schultz, P. G. (1991) Tetrahedron 47, 2563.
11. Costello, P. B., & Green, F. A. (1988) Infect. Immun. 56, 1738.
12. Cygler, M., Boodhoo, A., Lee, J. S., & Anderson, W. F. (1987) J. Biol. Chem. 262, 643.
13. Eagan, M., Norris, J., Cooper, B. C., & Glick, G. D. (1995) Bioorg. Chem. 23, 1012.
14. Eaton, R. B., Schnneider, G., & Schur, P. H. (1983) Arthritis Rheum. 26, 52.
15. Edberg, J. C., & Taylor, R. P. (1986) J. Immunol. 136, 4581.
16. Eilat, D. (1985) Immunol. Today 6, 123.
17. Eilat, D., & Anderson, W, F. (1994) Mol. Immunol. 31, 1377.
18. Faaber, P., Rijke, T. P., van de Putte, L. B., Capel, P. J., & Berden, J H. (1986) J. Clin. Invest. 77, 1824.
19. Fisher, G. H., Rosenberg, F. J., Straus, S. E., Dale, J. K., Middleton, L. A., Lin, A. Y., Strober, W., Lenardo, M. J., & Puck, J. M. (1995) Cell 81, 935.
20. Foster, M. H., Madaio, M. P., & Barrett, K. J. (1992) DNA Cell Biol. 11, 175.
21. Foster, M. H., Cizman, B., & Madaio, M. P. (1993) Lab. Invest. 69, 494.
22. Gay, S., Losman, M. J., Koopman, W. J., & Miller, E. J. (1985) J. Immunol. 135, 1097.
23. Glick, G. D., Osborne, S. E., Knitt, D. S., & Marino, J. P., Jr. (1992) J. Am. Chem. Soc. 114, 5447.
24. Herron, J. N., He, X. M., Ballard, D. W., Blier, P. R., Pace, P. E., Blothwell, A. L., Voss, E. W., Jr., & Edmundson, A. B. (1991) Proteins: Struct., Funct., Genet. 11, 159.
25. Isenberg, D. A., Ehrenstein, M. R., Langhurst, C., & Kalsi, J. K. (1994) Arthritis Rheum. 37, 169.
26. Karpel, R. L. (1990) in The biology of nonspecific DNA - protein interactions (Revzin, A., Ed.) p 103, CRC Press, Boca Raton, FL.
27. Katz, J. B., Limpanasithikul, W., & Diamond, B. (1994) J. Exp. Med. 180, 925.
28. Kelly, R. C., Jensen, D. E., & von Hippel, P. H. (1976) J. Biol. Chem. 251, 7240.
29. Kim, Y. T., Tabor, S., Churchich, J. E., & Richardson, C. C. (1992) J. Biol. Chem. 267, 15032.
30. Koffler, D., Schur, P. H., & Kunkel, H. G. (1967) J. Exp. Med. 126, 607.
31. Koffler, D., Carr, R., Agnello, V., Thoburn, R., & Kunkel, H. G. (1971) J. Exp. Med. 134, 294.
32. Kowalczykowski, S. C., Bear, D., & von Hippel, P. H. (1981) Enzymes (3rd Ed.) 14, 373.
33. Kowalczykowski, S. C., Paul, L. S., Lonberg, N., Newport, J. W., McSwiggen, J. A., & von Hippel, P. H. (1986) Biochemistry 25, 1226.
34. Krishnan, M. R., & Marion, T. N. (1993) J. Immunol. 150, 4948.
35. La Baer, J., & Yamamoto, K. R. (1994) J. Mol. Biol. 239, 664.
36. Lake, R. A., Morgan, A., Henderson, B., & Staines, N. A. (1985) Immunology 54, 389.
37. Lee, J. S., Dombroski, D. F., & Mosmann, T. R. (1982) Biochemistry 21, 4940.
38. Lohman, T. M., & Bujalowski, W. (1990) in The biology of nonspecific DNA - protein interactions (Rezvin, A., Ed.) p 131, CRC Press, Boca Raton, FL.
39. Lohman, T. M., de Haseth, P. L., & Record, M. T., Jr. (1980) Biochemistry 19, 3522.
40. Madaio, M. P., Carlson, J., Cataldo, J., Ucci, A., Migliorini, P., & Pankewycz, O. (1987) J. Immunol. 138, 2883.
41. Margulies, D. H., Kuehl, W. M., & Scharff, M. D. (1976) Cell 8, 405.
42. Marion, T. N., Tillman, D. M., Jou, N.-T., & Hill, R. J. (1992) Immunol. Rev. 128, 123.
43. Marky, L. A., Blumenfeld, K. S., Kozlowski, S., & Breslauer, K. J. (1983) Biopolymers 22, 1247.
44. McGhee, J. D., & von Hippel, P. H. (1974) J. Mol. Biol. 86, 469.
45. Mohan, C., Adams, S., Stanik, V., Datta, S. K. (1993) J. Exp. Med. 177, 1367.
46. Mol, C. D., Muir, A. K., Lee, J. S., & Anderson, W. F. (1994) J. Biol. Chem. 269, 3605.
47. Munns, T. W., & Freeman, S. K. (1989) Biochemistry 28, 10048.
48. Nagata, S., & Golstein, P. (1995) Science 267, 1449.
49. Ohnishi, K., Ebling, F. M., Mitchell, B., Singh, R. R., Hahn, B. H., & Tsao, B. P. (1994) Int. Immunol. 6, 817.
50. Oi, V. T., Herzenberg, L. A. (1980) in Selected methods in cellular immunology (Mishell, B. B., & Shiigi, S. M., Eds.) p 358, W. H. Freeman, New York.
51. Pabo, C. O., & Sauer, R. T. (1992) Annu. Rev. Biochem. 61, 1053.
52. Pankewycz, O. G., Migliorini, P., & Madaio, M. P. (1987) J. Immunol. 139, 3287.
53. Papalian, M., Lafer, E., Wong, R., & Stollar, B. D. (1980) J. Clin. Invest. 65, 469.
54. Pesce, A. J., & Michael, J. G. (1992) J. Immunol. Methods 150, 111.
55. Polymenis, M., & Stollar, B. D. (1994) J. Immunol. 152, 5318.
56. Radic, M. Z., & Weigert, M. (1994) Annu. Rev. Immunol. 12, 487.
57. Radic, M. Z., Mackle, J., Ericson, J., Mol, C., Anderson, W. F., & Weigert, M. (1993) J. Immunol. 150, 4966.
58. Record, M. T., Jr., & Spolar, R. S. (1990) in The biology of nonspecific DNA - protein interactions (Rezvin, A., Ed.) p 33, CRC Press, Boca Raton, FL.
59. Record, M. T., Jr., Lohman, T. M., & de Haseth, P. (1976) J. Mol. Biol. 107, 145.
60. Rhodes, D. (1989) in Protein Function: A Practical Approach (Creighton, T. E., Ed.) p 177. IRL Press, Oxford.
61. Rumbley, C. A., Denzin, L. K., Yantz, L., Tetin, S. Y., & Voss, E. W., Jr. (1993) J. Biol. Chem. 268, 13667.
62. Runkel, L., & Nordheim, A. (1986) J. Mol. Biol. 189, 487.
63. Sabbaga, J., Line, S. R., Potocnjak, P., & Madaio, M. P. (1989) Eur. J. Immunol. 19, 137.
64. Sanford, D. G., & Stollar, B. D. (1990) J. Biol. Chem. 265, 18608.
65. Sanford, D. G., & Stollar, B. D. (1992) Methods Enzymol. 212, 355.
66. Schillbach, J. F., Near, R. I., Bruccoleri, R. E., Haber, E., Jeffrey, P. D., Novotny, J., Sheriff, S., & Margolies, M. N. (1993) Protein Sci. 2, 206.
67. Schwartz, R. S., & Stollar, B. D. (1985) J. Clin. Invest. 75, 321.
68. Sharon, J. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 4814.
69. Shefner, R., Kleiner, G., Turken, A., Papazian, L., & Diamond, B. (1991) J. Exp. Med. 173, 287.
70. Skinner, M. M., Zhang, H., Leschnitzer, D. H., Guan, Y., Bellamy, H., Sweet, R. M., Gray, C. W., Konings, R. N., Wang, A. H., & Terwilliger, T. C. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 2071.
71. Smeenk, R. J., Brinkman, K., van den Brink, H. G., & Westgeest, A. A. (1988) J. Immunol. 140, 3786.
72. Stevens, S. Y., Swanson, P. C., Voss, E. W., Jr., & Glick, G. D. (1993) J. Am. Chem. Soc. 115, 1585.
73. Stevens, S. Y., Swanson, P. C., & Glick, G. D. (1994) J. Immunol. Methods 177, 185.
74. Stollar, B. D., Levine, L., Lehrer, H. I., & Van Vunakis, H. (1962) Proc. Natl. Acad. Sci. U.S.A. 48, 874.
75. Stollar, B. D., Zon, G., & Pastor, R. W. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 4469.
76. Swanson, P. C., Cooper, B. C., & Glick, G. D. (1994) J. Immunol. 152, 2601.
77. Tan, E. M. (1989) Adv. Immunol. 44, 93.
78. Tetin, S. Y., Rumbley, C. A., Hazlett, T. L., & Voss, E. W., Jr. (1993) Biochemistry 32, 9011.
79. Tsao, B. P., Ebling, F. M., Roman, C., Panosian-Sahakian, N., Calame, K., & Hahn, B. H. (1990) J. Clin. Invest. 85, 530.
80. Vlahakos, D. V., Foster, M. H., Adams, S., Katz, M., Ucci, A. A., Barrett, K. J., Datta, S. K., & Madaio, M. P. (1992) Kidney Int. 41, 1690.
81. Voss, E. W., Jr. (1988) Anti-DNA antibodies in SLE, CRC Press, Boca Raton, FL.
82. Wang, H., Osborne, S. E., Zuiderweg, E. R., & Glick, G. D. (1994) J. Am. Chem. Soc. 116, 5022.
83. Weeks, K. M., & Crothers, D. M. (1992) Biochemistry 31, 10281.
84. Wing, R., Drew, H., Takano, T., Broka, C., Tanaka, S., Itakura, K., & Dickerson, R. E. (1980) Nature 287, 755.
85. Woodbury, C. P. & von Hippel, P. H. (1983) Biochemistry 22, 4730.