Intra-specific heterogeneity of the rDNA internal transcribed spacer in the Simulium damnosum (Diptera: Simuliidae) complex

Molecular Biology and Evolution

Volumn 13, Issue 1, 1996, Pages 244-252

  Tang, Jianming ^a   Toè, Laurent ^b   Back, Christian ^b   Unnasch, Thomas R ^a,c  

^a UNIVERSITY OF ALABAMA SCHOOL OF MEDICINE   (United States)

^b Onchocerciasis Control Programme   (Côte d’Ivoire)

^c UNIVERSITY OF ALABAMA AT BIRMINGHAM   (United States)

Author keywords

heteroduplex analysis; internal transcribed spacer; onchocerciasis; polymerase chain reaction; sibling species; Simulium damnosum s.l.

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME DNA; RIBOSOME RNA; RNA 16S;

ARTICLE; DISEASE CARRIER; DNA HYBRIDIZATION; DNA SEQUENCE; GEL ELECTROPHORESIS; GENETIC POLYMORPHISM; GENOTYPE; NONHUMAN; ONCHOCERCA VOLVULUS; ONCHOCERCIASIS; PHYLOGENY; POLYMERASE CHAIN REACTION; SIMULIUM DAMNOSUM; SOUTHERN BLOTTING; SPECIES DIFFERENCE;

DIPTERA; ONCHOCERCA VOLVULUS; SIMULIIDAE; SIMULIUM DAMNOSUM; SIMULIUM NIGRICOXUM;

EID: 0030061504     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025561     Document Type: Article

References (30)

1. ARNHEIM, N. 1983. Concerted evolution of multigene families. Pp. 38-61 in M. NEI and R. K. KOEHN, eds. Evolution of genes and proteins. Sinauer, Boston, Mass.
2. BOAKYE, D. A. 1993. A pictorial guide to the chromosomal identification of members of the Simulium damnosum Theobald complex in West Africa with particular reference to the Onchocerciasis Control Programme Area. Trop. Med. Parasitol. 44:223-243.
3. BROCKHOUSE, C. L., C. G. VAJIME, R. MARIN, and R. M. TANGUAY. 1993. Molecular identification of Onchocerciasis vector sibling species in black flies (Diptera: Simuliidae). Biochem. Biophys. Res. Commun. 194:628-634.
4. BUDDEN, F. H. 1963. Comparative study of ocular onchocerciasis in savannah and rain forest. Trans. R. Soc. Trop. Med. Hyg. 57:64-70.
5. DAVIS, J. I., and K. C. NIXON. 1992. Populations, genetic variation, and the delimitation of phylogenetic species. Syst. Biol. 41:421-435.
6. DELWART, E. L., E. G. SHPAER, J. LOUWAGIE, F. E. MCCUTCHAN, M. GREZ, H. RUBSAMEN-WAIGMANN, and J. I. MULLINS. 1993. Genetic relationship determined by a DNA heteroduplex mobility assay: Analysis of HIV-1 env genes. Science 262:1257-1261.
7. DOVER, G. A. 1986. Molecular drive in multigene families: how biological novelties arise, spread and are assimilated. Trends Genet. 2:159-165.
8. DUKE, B. O. L. 1981. Geographical aspects of onchocerciasis. Ann. Belg. Soc. Trop. Med. 61:179-186.
9. DUKE, B. O. L., P. J. MOORE, and J. R. DELEON. 1967. Onchocerca-Simulium complexes. Ann. Trop. Med. Parasitol. 61:332-337.
10. FELSENSTEIN, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Seattle, Washington, Department of Genetics, University of Washington.
11. GERBI, S. A. 1985. Evolution of ribosomal DNA. Pp. 419-517 in R. J. MACINTYRE, ed. Molecular evolutionary genetics. Plenum, New York.
12. HILLIS, D. M., and S. K. DAVIS. 1986. Evolution of ribosomal DNA: fifty million years of recorded history in the frog genus Rana. Evolution 40:1275-1288.
13. HILLIS, D. M., and M. T. DIXON. 1991. Ribosomal DNA: molecular evolution and phylogenetic inference. Quart. Rev. Biol. 66:411-453.
14. HILLIS, D. M., C. MORITZ, C. A. PORTER, and R. J. BAKER. 1991. Evidence for biased gene conversion in concerted evolution of ribosomal DNA. Science 251:308-310.
15. KIMURA, M. 1980. A simple model for estimating evolutionary rates of base substitutuions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
16. MEREDITH, S. E. O., G. LANDO, A. A. GBAKIMA, P. A. ZIMMERMAN, and T. R. UNNASCH. 1991. Onchocerca volvulus: Application of the polymerase chain reaction to identification and strain differentiation of the parasite. Exp. Parasitol. 73:335-344.
17. MINDELL, D. P., and R. L. HONEYCUTT. 1990. Ribosomal RNA in vertebrates: evolution and phylogenetic applications. Annu. Rev. Ecol. Syst. 21:541-566.
18. PLEYTE, K. A., S. D. DUNCAN, and R. B. PHILLIPS. 1992. Evolutionary relationships of the Salmonid fish genus Salvelinus inferred from DNA sequences of the first internal transcribed spacer (ITS1) of ribosomal DNA. Mol. Phylogenet. Evol. 1:223-230.
19. POST, R. J. 1984. Natural interspecific hybridisation of Simulium sanctipauli s.l. with Simulium squamosum and Simulium yahense (Diptera: Simuliidae). Tropenmed. Parasitol. 35:58-60.
20. SAITOU, N., and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
21. SAMBROOK, J., E. F. FRITSCH, and T. MANIATIS. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory. Cold Spring Harbor, N.Y.
22. SCHLOTTERER, C., M.-T. HAUSER, A. V. HAESELER, and T. TAUZ. 1994. Comparative evolutionary analysis of rDNA ITS regions in Drosophila. Mol. Biol. Evol. 11:513-522.
23. STRACHAN, T. D. A. WEBB, and G. A. DOVER. 1985. Transition stages of molecular drive in multi-copy DNA families in Drosophila. EMBO J. 4:1701-1708.
24. SWOFFORD, D. L. 1991. PAUP: phylogenetic analysis using parsimony, version 3.0. Illinois Natural History Survey, Champaign, Ill.
25. TANG, J., L. TOÉ, C. BACK, P. A. ZIMMERMAN, K. PRUESS, and T. R. UNNASCH. 1995. The Simulium damnosum species complex: phylogenetic analysis and molecular identification based upon mitochondrially encoded gene sequences. Insect Mol. Biol. 4:79-88.
26. VOGLER, A. P., and R. DESALLE. 1994. Evolution and phylogenetic information content of the ITS-1 region in the tiger beetle Cincindela dorsalis. Mol. Biol. Evol. 11:393-405.
27. WAGNER, A., N. BLACKSTONE, P. CARTWRIGHT, M. DICK, B. MISOF, P. SNOW, G. P. WAGNER, J. BARTELS, M. MURTHA, and J. PENDELTON. 1994. Surveys of gene families using polymerase chain reaction: PCR selection and PCR drift. Syst. Biol. 43:250-261.
28. WESSON, D. M., C. H. PORTER, and F. H. COLLINS. 1993. Sequence and secondary structure comparisons of ITS rDNA in mosquitoes (Diptera: Culicidae). Mol. Phylogenet. Evol. 1:253-269.
29. WHO EXPERT COMMITTEE ON ONCHOCERCIASIS. 1987. Third report. WHO Tech. Rep. #752. World Health Organization. Geneva.
30. ZIMMERMAN, P. A., K. Y. DADZIE, G. DESOLE, J. REMME, E. S. ALLEY, and T. R. UNNASCH. 1992. Onchocerca volvulus DNA probe classification correlates with epidemiological patterns of blindness. J. Infect. Dis. 165:964-968.