High variability for control-region sequences in a marine mammal: Implications for conservation and biogeography of Steller sea lions (Eumetopias jubatus)

Journal of Mammalogy

Volumn 77, Issue 1, 1996, Pages 95-108

  Bickham, John W ^a,b   Patton, John C ^b   Loughlin, Thomas R ^c  

^a TEXAS A AND M UNIVERSITY   (United States)

^b LGL Ecological Research Associates Inc   (United States)

^c NOAA National Marine Mammal Laboratory   (United States)

Author keywords

Eumetopias jubatus; Marine mammals; Mitochondrial DNA; Phylogeography; Steller sea lions

Indexed keywords

EUMETOPIAS JUBATUS;

EID: 0030059728     PISSN: 00222372     EISSN: None     Source Type: Journal    
DOI: 10.2307/1382712     Document Type: Article

References (38)

1. AMOS, B., AND A. R. HOELZEL. 1991. Long-term preservation of whale skin for DNA analysis. Report of the International Whaling Commission, Special Issue, 13:99-103.
2. AVISE, J. C., ET AL. 1987. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Review of Ecology and Systematics, 18:489-522.
3. BEARDMORE, J. A. 1983. Extinction, survival, and genetic variation. Pp. 125-151, in Genetics and conservation (C. M. Schonewald-Cox, S. M. Chambers, B. MacBryde, and W. L. Thomas, eds.). National Park Service, Washington, D.C., 722 pp.
4. BICKHAM, J. W., C. C. WOOD, AND J. C. PATTON. 1995. Biogeographic implications of cytochrome b sequences and allozymes in sockeye (Oncorhynchus nerka). Journal of Heredity, 86:140-144.
5. BONNELL, M. L., AND R. K. SELANDER. 1974. Elephant seals: genetic variation and near extinction. Science, 184:908-909.
6. CALKINS, D. G., AND K. W. PITCHER. 1983. Population assessment, ecology and trophic relationships of Steller sea lions in the Gulf of Alaska. Pp. 447-546, in Environmental assessment, of the Alaskan continental shelf. United States Department of Commerce and United States Department of the Interior, Final Report of Principal Investigators, 19: 1-565.
7. CANN, R. L., M. STONEKING, AND A. C. WILSON. 1987. Mitochondrial DNA and human evolution. Nature, 325:31-36.
8. CARR, S. M., AND H. D. MARSHALL. 1991. A direct approach to the measurement of genetic variation in fish populations: applications of the polymerase chain reaction to studies of Atlantic cod, Gadus morhua L. Journal of Fish Biology, 39(suppl. A):101-107.
9. CRONIN, M. A., W. J. SPEARMAN, R. L. WILMOT, J. C. PATTON, AND J. W. BICKHAM. 1993. Mitochondrial DNA variation in chinook and chum salmon detected by restriction enzyme analysis of PCR products. Canadian Journal of Fisheries and Aquatic Sciences, 50:708-715.
10. FELSENSTEIN, J. 1993. PHYLIP (phytogeny inference package) manual, version 3.53c. University of Washington, Seattle (on disk).
11. FERL, R. J., C. J. NAIRN, J. SHE, E. WAKELAND, AND E. ALMIRA. 1991. The application of automated DNA sequence analysis to phylogenetic studies. Pp. 45-58, in Phylogenetic analysis of DNA sequences (M. M. Miyamoto and J. Cracraft, eds.) Oxford University Press, New York, 358 pp.
12. GENTRY, R. L. 1970. Social behavior of the Steller sea lion. Ph.D. dissert., University of California, Santa Cruz, 113 pp.
13. GREENBERG, B. D., J. E. NEWBOLD, AND A. SUGINO. 1983. Intraspecific nucleotide sequence variability surrounding the origin of replication in human mitochondrial DNA. Gene, 21:33-49.
14. HALL, E. R. 1981. The mammals of North America. Second ed. John Wiley & Sons, New York, 2:601-1181 + 90.
15. JUKES, T. H., AND C. R. CANTOR. 1969. Evolution in protein molecules. Pp. 21-123, in Mammalian protein metabolism (H. N. Munro, ed.). Academic Press, New York, 571 pp.
16. KENYON, K. W., AND D. W. RICE. 1961. Abundance and distribution of the Steller sea lion. Journal of Mammalogy, 42:223-234.
17. LIDICKER, W. Z., JR., R. D. SAGE, AND D. G. CALKINS. 1981. Biochemical variation in northern sea lions from Alaska. Pp. 231-244, in Mammalian population genetics (M. H. Smith and J. Joule, eds.). University of Georgia Press, Athens, 392 pp.
18. LOUGHLIN, T. R., M. A. PEREZ, AND R. L. MERRICK. 1987. Eumetopias jubatus. Mammalian Species, 283:1-7.
19. LOUGHLIN, T. R., A. S. PERLOV, AND V. A. VLADIMIROV. 1992. Range-wide survey and estimation of total number of Steller sea lions in 1989. Marine Mammal Science, 8:220-239.
20. LOUGHLIN, T. R., D. J. RUGH, AND C. H. FUSCUS. 1984. Northern sea lion distribution and abundance: 1956-80. The Journal of Wildlife Management, 48:729-740.
21. LOUGHLIN, T. R., L. CONSIGLIERI, R. L. DELONG, AND A. T. ACTOR. 1983. Incidental catch of marine mammals by foreign fishing vessels, 1978-1981. Marine Fisheries Review, 45:44-49.
22. MALDONADO, J. E., F. O. DAVILA, B. S. STEWART, E. GEFFEN, AND R. K. WAYNE. 1995. Intraspecific genetic differentiation in California sea lions (Zalophus californianus) from southern California and the Gulf of California. Marine Mammal Science, 11:46-58.
23. MANIATIS, T., E. F. FRISTCH, AND J. SAMBROOK. 1982. Molecular cloning: a laboratory manual. Cold Spring Harbor Publications, New York, 545 pp.
24. MERRICK, R. L., T. R. LOUGHLIN, AND D. G. CALKINS. 1987. Decline in abundance of northern sea lions, Eumetopias jubatus, in Alaska, 1956-1986. Fishery Bulletin of the United States 85:351-365.
25. MERRICK, R. L., L. M. RERM, R. D. EVERITT, R. R. REAM, AND L. A. LESSARD. 1991. Aerial and shipbased surveys of northern sea lions (Eumetopias jubalus) in the Gulf of Alaska and Aleutian Islands during June and July 1990. United States Department of Commerce, National Oceanographic and Atmospheric Administration Technical Memorandum, National Marine Fisheries Service, F/NWC-196:1-34.
26. NEI, M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89:583-590.
27. NEI, M., AND F. TAJIMA. 1981. DNA polymorphism detectable by restriction endonucleases. Genetics, 97:145-163.
28. NEIGEL, J. E., AND J. C. AVISE. 1993. Application of a random walk model to geographic distributions of animal mitochondrial DNA variation. Genetics, 135: 1209-1220.
29. SHAUGHNESSY, P. D. 1974. An electrophoretic study of blood and milk proteins of the southern elephant seal, Mirounga leonina. Journal of Mammalogy, 55: 796-808.
30. SLADE, R. W. 1992. Limited MHC polymorphism in the southern elephant seal: implications for MHC evolution and marine mammal population biology. Proceedings of the Royal Society of London. 249B: 163-171.
31. SWOFFORD, D. L., AND R. B. SELANDER. 1981. BIOSYS - 1: a FORTRAN program for the comprehensive analyses of electrophoretic data in population genetics and evolution. Journal of Heredity. 72:281-283.
32. TESTA, J. W. 1986. Electromorph variation in Weddell seals (Leptonychotes weddelli). Journal of Mammalogy. 67:606-610.
33. THOMAS, W. K., S. PÄÄBO, F. X. VILLABLANCA, AND A. C. WILSON. 1990. Spatial and temporal continuity of kangaroo rat populations shown by sequencing mitochondrial DNA from museum specimens. Journal of Molecular Evolution 31:101-112.
34. TROWSDALE, J., V. GROVES, AND A. ARNASON. 1989. Limited MHC polymorphism in whales. Immunogenetics, 29:19-24.
35. WEIR, B. S. 1990. Genetic data analysis. Sinauer Associates, Sunderland, Massachusetts, 377 pp.
36. WILSON, A. C., ET AL. 1985. Mitochondrial DNA and two perspectives on evolutionary genetics. Biological Journal of the Linnaean Society, 26:375-400.
37. WOOD, C. C., B. E. RIDDELL, D. T. RUTHERFORD, AND R. E. WITHLER. 1994. Biochemical genetic survey of sockeye salmon (Oncorhynchus nerka) in Canada. Canadian Journal of Fisheries and Aquatic Sciences, 51 (suppl.):114-131.
38. WRIGHT, S. 1943. Isolation by distance. Genetics, 28: 114-138.