DNA typing of the HLA-A gene: Population study and identification of four new alleles in Japanese

Tissue Antigens

Volumn 47, Issue 2, 1996, Pages 93-101

  Date, Y ^a,b   Kimura, A ^a   Kato, H ^b   Sasazuki, T ^c  

^a TOKYO MEDICAL AND DENTAL UNIVERSITY   (Japan)

^b KURUME UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^c KYUSHU UNIVERSITY   (Japan)

Author keywords

DNA typing; HLA A; Linkage disequilibrium; PCR

Indexed keywords

HLA A ANTIGEN; PRIMER DNA;

ALLELE; ARTICLE; B LYMPHOBLAST; DNA HYBRIDIZATION; DNA SEQUENCE; EXON; GENE LINKAGE DISEQUILIBRIUM; GENOTYPE; HOMOZYGOTE; HUMAN; HUMAN CELL; JAPAN; NUCLEOTIDE SEQUENCE; OLIGONUCLEOTIDE PROBE; POLYMERASE CHAIN REACTION; POPULATION RESEARCH; PRIORITY JOURNAL;

EID: 0030057504     PISSN: 00012815     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1399-0039.1996.tb02520.x     Document Type: Article

References (28)

1. Townsend A, Bodmer H. Antigen recognition by class I restricted T lymphocytes. Annu Rev Immunol 1989: 7: 601.
2. Todd JA, Bell JI, McDevitt HO. HLA-DQβ gene contributes to susceptibility and resistance to insulin-dependent diabetes mellitus. Nature 1987: 329: 599.
3. Charron D. Molecular basis of human leukocyte antigen class II disease associations. Adv Immunol 1990: 48: 107.
4. Thorogood J, Persijin GG, Schreuder GMT et al. The effect of HLA-matching on kidney graft survival in separate post transplantation time intervals. Transplantation 1990: 50: 146.
5. Clay TM, Bidwell JL, Howard MR, Bradley BA. PCR-fingerprinting for selection of HLA matched unrelated marrow donors. Lancet 1991: 337: 1049.
6. Bugawan TL, Apple R, Erlich HA. A method for typing polymorphism at the HLA-A locus using PCR amplification and immobilized oligonucleotide probes. Tissue Antigens 1994: 44: 137-147.
7. Gao X, Jakobsen IB, Serjeantson SW. Characterization of the HLA-A polymorphism by locus-specific polymerase chain reaction amplification and oligonucleotide hybridization. Hum Immunol 1994: 41: 267-279.
8. Oh SH, Fleischhauer K, Yang SY. Isoelectric focusing subtypes of HLA-A can be defined by oligonucleotide typing. Tissue Antigens 1993: 41: 135-142.
9. Cereb N, Maye P, Lee S, Kong Y, Yang SY. Locus-specific amplification of HLA class I genes from genomic DNA: locus-specific sequences in the first and third introns of HLA-A, -B, and -C alleles. Tissue Antigens 1995: 45: 1-11.
10. Browning MJ, Krausa P, Rowan A, Bicknell DC, Bodmer JG, Bodmer WF. Tissue typing the HLA-A locus from genomic DNA by sequence-specific PCR: comparison of HLA genotype and surface expression on colorectal tumor cell lines. Proc Natl Acad Sci U S A 1993: 90: 2842-2845.
11. Bodmer JG, Marsh SGE, Albert ED et al. Nomenclature for factors of the HLA system, 1995. Tissue Antigens 1995: 46: 1-18.
12. Zemmour J, Parham P. HLA Class I nucleotide sequences, 1992. Tissue Antigens 1992: 40: 221-228.
13. Yang SY, Milford E, Hämmerling U, Dupont B. Description of the reference panel of B-lymphoblastoid cell lines for factors of the HLA system: the B-cell line panel designed for the tenth international histocompatibility workshop. In: Dupont B, ed. Immunology of HLA, vol 1. New York: Springer-Verlag, 1989: 11.
14. Kimura A, Dong RP, Harada H, Sasazuki T. DNA typing of HLA class II genes in B-lymphoblastoid cell lines homozygous for HLA. Tissue Antigens 1992: 40: 5-12.
15. Yoshida M, Kimura A, Numano F, Sasazuki T. Polymerase-chain-reaction-based analysis of polymorphism in the HLA-B gene. Hum Immunol 1992: 34: 257-266.
16. Sambrock J, Fritsch EF, Maniatis TM. Molecular cloning. A laboratory manual. 2nd edn. Cold Spring Harbor: Cold Spring Harbor Laboratory 1989: 916-923.
17. Mittal KK. The HLA polymorphism and susceptibility to disease. Vox Sang 1976: 31: 161.
18. Kato K, Trapani JA, Allopenna J, Dupont B, Yang SY. Molecular analysis of the serologically defined HLA-Aw 19 antigens. A genetically distinct family of HLA-A antigens comprising A29, A31, A32 and Aw33, but probably not A30. J Immunol 1989: 143: 3371-3378.
19. Olerup O, Daniels T, Baxter-Lowe LA. Correct sequence of the A*3001 allele obtained by PCR-SSP typing and automated nucleotide sequencing. Tissue Antigens 1994: 44: 265-267.
20. Blasczyk R, Wehling J, Hahn U, Schwella N, Huhn D, Salama A. Identification of a novel HLA-A33 subtype (A*3303) and correction of the A*3301 sequence. Tissue Antigens 1995: 45: 348-352.
21. Barouch D, Krausa P, Bodmer J, Browning MJ, McMichael AJ. Identification of a novel HLA-A2 subtype, HLA-A*0216. Immunogenetics 1995: 41: 388.
22. Selvakumar A, Granja CB, Salazar M, Alosco SM, Yunis EJ, Dupont B. A novel subtype of A2 (A*0217) isolated from the South American Indian B-cell line AMALA. Tissue Antigens 1995: 45: 343-347.
23. Kashiwase K, Tokunaga K, Ishikawa Y et al. A new HLA-A9 subtype lacking the Bw4 epitope: ancestral or revenant allele? Hum Immunol 1995: 42: 221-226.
24. Castaño R, Ezquerra A, Doménech N, López de Castro JA. An HLA-A2 population variant with structural polymorphism in the α3 region. Immunogenetics 1988: 27: 345-355.
25. Yoshida M, Kimura A, Katsuragi K, Numano F, Sasazuki T. DNA typing of HLA-B gene in Takayasu's arteritis. Tissue Antigens 1993: 42: 87-90.
26. Kato N, Kikuchi A, Kano K, Egawa K, Takiguchi M. Molecular analysis of a novel HLA-A33 subtype associated with HLA-B44. Tissue Antigens 1993: 41: 211-213.
27. Dong RP, Kimura A, Okubo R et al. HLA-A and DPB1 loci confer susceptibility to Graves' disease. Hum Immunol 1992: 35: 165-172.
28. Wan XL, Kimura A, Dong RP, Honda K, Tamai H, Sasazuki T. HLA-A and -DRB4 genes in controlling the susceptibility to Hashimoto's thyroiditis. Hum Immunol 1995: 42: 131-136.