Use of an rRNA internal transcribed spacer region to distinguish phylogenetically closely related species of the genera Zygosaccharomyces and Torulaspora

International Journal of Systematic Bacteriology

Volumn 46, Issue 1, 1996, Pages 189-194

  James, S A ^a   Collins, M D ^b   Roberts, I N ^a  

^a INSTITUTE OF FOOD RESEARCH   (United Kingdom)

^b INSTITUTE OF FOOD RESEARCH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; RNA 18S;

ARTICLE; EVOLUTION; NONHUMAN; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA GENE; RNA SEQUENCE; RNA TRANSCRIPTION; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE; TORULOPSIDALES; ZYGOSACCHAROMYCES;

MITOSPORIC SACCHAROMYCETALES; TORULASPORA; ZYGOSACCHAROMYCES;

EID: 0030050939     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-46-1-189     Document Type: Article

References (19)

1. Barnett, J. A., R. W. Payne, and D. Yarrow. 1990. Yeasts: characteristics and identification, 2nd ed. Cambridge University Press, Cambridge.
2. Felsenstein, J. 1993. PHYLIP: phylogenetic inference package, version 3.5. University of Washington, Seattle.
3. Feng, D. F., and R. F. Doolittlte. 1987. Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J. Mol. Evol. 35:351-360.
4. Genetics Computer Group. 1991. Program manual for the GCG package, version 7. Genetics Computer Group, Madison, Wis.
5. Hori, H., and S. Osana. 1979. Evolutionary change in 5S RNA secondary structure and a phylogenetic tree of 54 5S RNA species. Proc. Natl. Acad. Sci. USA 76:381-385.
6. Hutson, R. A., D. E. Thompson, and M. D. Collins. 1993. Genetic interrelationships of saccharolytic Clostridium botulinum types B, E and F and related clostridia as revealed by small-subunit rRNA gene sequences. FEMS Microbiol. Lett. 108:103-110.
7. James, S. A., M. D. Collins, and I. N. Roberts. 1994. Genetic interrelationship among species of the genus Zygosaccharomyces as revealed by small-subunit rRNA gene sequences. Yeast 10:871-881.
8. Kurtzman, C. P. 1990. DNA relatedness among species of the genus Zygosaccharomyces. Yeast 6:213-219.
9. Kurtzman, C. P., and C. J. Robnett. 1991. Phylogenetic relationships among species of Saccharomyces, Schizosaccharomyces, Debaryomyces and Schwanniomyces determined from partial ribosomal RNA sequences. Yeast 7:61-72.
10. Lott, T. J., R. J. Kuykendall, and E. Reiss. 1993. Nucleotide sequence analysis of the 5.8S rDNA and adjacent ITS2 region of Candida albicans and related species. Yeast 9:1199-1206.
11. Musters, W., K. Boon, C. A. F. M. van der Sande, H. van Heerikhuizen, and R. J. Planta. 1990. Functional analysis of transcribed spacers of yeast ribosomal DNA. EMBO J. 9:3989-3996.
12. O'Donnell, K. 1992. Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambicum (Gibberella pulicaris). Curr. Genet. 22:213-220.
13. Price, C. W., G. B. Fuson, and H. J. Phaff. 1978. Genome comparison in yeast systematics: delimitation within the genera Schwanniomyces, Saccharomyces, Debaryomyces and Pichia. Microbiol. Rev. 42:161-193.
14. Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
15. Swofford, D. L., and G. Olsen. 1990. Phylogenetic reconstruction, p. 411-501. In D. M. Hillis and C. Moritz (ed.), Molecular systematics. Sinauer Associates, Inc., Publishers, Sunderland, Mass.
16. van der Sande, C. A. F. M., M. Kwa, R. W. van Nues, H. van Heerikhuizen, H. A. Raue, and R. J. Planta. 1992. Functional analysis of internal transcribed spacer 2 of Saccharomyces cerevisiae ribosomal DNA. J. Mol. Biol. 223:899-910.
17. White, T. J., T. D. Bruns, S. Lee, and J. W. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, p. 315-322. In M. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. While (ed.), PCR protocols. Academic Press, San Diego, Calif.
18. Woese, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
19. Yarrow, D. 1984. Zygosaccharomyces Barker, p. 449-465. In N. J. W. Kregervan Rij (ed.), The yeasts: a taxonomic study, 3rd ed. Elsevier Science Publishers, Amsterdam.