Contribution of facilitated diffusion and processive catalysis to enzyme efficiency: Implications for the EcoRI restriction-modification system

Biochemistry

Volumn 35, Issue 7, 1996, Pages 2201-2208

  Surby, Mark A ^a   Reich, Norbert O ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; DNA METHYLTRANSFERASE; DOUBLE STRANDED DNA; ENDONUCLEASE; S ADENOSYLHOMOCYSTEINE; S ADENOSYLMETHIONINE;

ARTICLE; BASE PAIRING; CATALYSIS; DIFFUSION; DNA FLANKING REGION; DNA METHYLATION; ENZYME ACTIVITY; ENZYME PURIFICATION; ESCHERICHIA COLI; MOLECULAR GENETICS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION;

BASE SEQUENCE; BINDING, COMPETITIVE; CATALYSIS; DEOXYRIBONUCLEASE ECORI; DNA, RECOMBINANT; MOLECULAR SEQUENCE DATA; SUBSTRATE SPECIFICITY;

EID: 0030045741     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi951883n     Document Type: Article

References (28)

1. Becker, C. R., Efcavitch, J. W., Heiner, C. R., & Kaiser, N. F. (1985) J. Chromatogr. 326, 9293-9305.
2. Berg, O. G., Winter, R. B., & von Hippel, P. H. (1981) Biochemistry 20, 6929-6948.
3. Bergerat, A., Kriebardis, A., & Guschlbauer, W. (1989) J. Biol. Chem. 264, 4064-4070.
4. Brody, R. S., Doherty, K. G., & Zimmerman, P D. (1986) J. Biol. Chem. 261, 7136-7143.
5. Dowd, D. R., & Lloyd, R. S. (1990) J. Biol. Chem. 265, 3424-3431.
6. Ehbrecht, H-J., Pingoud, A., Urbanke, C., Maass, G., & Gualerzi, C. (1985) J. Biol. Chem. 260, 6160-6166.
7. Fersht, A. (1985) Enzyme Structure and Mechanism, 2nd ed., W. H. Freeman and Company, New York.
8. Freifelder, D. (1982) Physical Biochemistry, 2nd ed., W. H. Freeman and Company, New York.
9. Greene, P. J., Heynecker, H. L., Bolivar, F., Rodriquez, R. L., Betlach, M. C., Covarrubias, A. A., Bachman, K., Russel, D. L. Tait, R., & Boyer, H. W (1978) Nucleic Acids Res. 5, 2373-2380.
10. Hager, P. W., Reich, N. O., Day, J. P., Coche, T. G., Boyer, H. G., Rosenberg, J. M., & Greene, P. J. (1990) J. Biol. Chem. 265, 21520-21526.
11. Herendeen, D. R., Kassavetis, G. A., & Geidusschek, P. E. (1992) Science 256, 1298-1303.
12. Jack, W. E., Terry, B. J., & Modrich, P. (1982) Proc. Natl. Acad. Sci. U.S.A. 79, 4010-4014.
13. Kabata, H., Kurosawa, O., Arai, I., Washizu, M., Margarson, S. A., Glass, R. E., & Shimamoto, N. (1993) Science 262, 1561-1562.
14. Langowski, J., Alves, J., Pingoud, A., & Maass, G. (1983) Nucleic Acids Res. 11, 501-513.
15. Nardone, G., Georse, J., & Chirikjian, J. G. (1986) J. Biol. Chem. 261, 12128-12133.
16. Reich, N. O., & Danzitz, M. J. (1991) Nucleic Acids Res. 19, 6587-6594.
17. Reich, N. O., & Mashhoon, N. (1991) Biochemistry 30, 2933-2939.
18. Reich, N. O., & Mashhoon, N. (1993) J. Biol. Chem. 268, 9191-9193.
19. Renbaum, P., & Razin, A. (1992) FEBS Lett. 313, 243-247.
20. Ricchetti, M., Metzger, W., & Heumann, H. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 4610-4614.
21. Riggs, A. D., Bourgeois, S., & Cohn, M. (1970) J. Mol. Biol. 53, 401-417.
22. Rubin, R. A., & Modrich, P. (1977) J. Biol. Chem. 252, 7265-7272.
23. Segel, I. H. (1975) Enzyme Kinetics, John Wiley and Sons, New York.
24. Surby, M. A., & Reich, N. O. (1996) Biochemistry 35, 2209-2217.
25. Terry, B. J., Jack, W. E., Rubin, R. A., & Modrich, P. (1983) J. Biol. Chem. 258, 9820-9825.
26. Terry, B. J., Jack, W. E., & Modrich, P. (1985) J. Biol. Chem. 260, 13130-13137.
27. von Hippel, P. H., & Berg, O. G. (1989) J. Biol. Chem. 264, 675-678.
28. Winter, R. B., Berg, O. G., & von Hippel, P. H. (1981) Biochemistry 20, 6961-6977.