The effect of deformation on the lateral resolution of atomic force microscopy

Journal of Microscopy

Volumn 182, Issue 2, 1996, Pages 106-113

  Yang, J ^a,b   Mou, J ^a   Yuan, J Y ^a,c   Shao, Z ^a  

^a UNIVERSITY OF VIRGINIA   (United States)

^b UNIVERSITY OF VERMONT   (United States)

^c ALBERTA RESEARCH COUNCIL   (Canada)

Author keywords

Atomic force microscopy (AFM); Computer simulation; Deformation; Elasticity; Low density lipoproteins (LDL); Macromolecules; Resolution

Indexed keywords

LIPOPROTEINS; MOLECULES; PROBES;

ATOMIC FORCE MICROSCOPY; ATOMIC-FORCE-MICROSCOPY; COMPUTATIONAL RESULTS; COMPUTER MODELS; ELASTIC PROPERTIES; LATERAL RESOLUTION; LOW DENSITY LIPOPROTEINS; LOW-DENSITY LIPOPROTEIN; MODEL-BASED OPC; RESOLUTION;

ATOMIC FORCE MICROSCOPY;

LOW DENSITY LIPOPROTEIN;

ARTICLE; ATOMIC FORCE MICROSCOPY; COMPUTER SIMULATION; ELASTICITY; MACROMOLECULE; PRIORITY JOURNAL;

EID: 0030043696     PISSN: 00222720     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2818.1996.140422.x     Document Type: Article

References (41)

1. Alexander, S., Hellemans, L., Martin, O., Schneir, J., Elings, V. & Hansma, P.K. (1989) An atomic resolution atomic force microscope implemented using an optical lever. J. Appl. Phys. 65, 164-167.
2. Binnig, G., Quate, C.F. & Gerber, Ch. (1986) Atomic force microscope. Phys. Rev. Lett. 56, 930-933.
3. Bustamante, C., Erie, D. & Keller, D. (1994) Biological and structural applications of scanning force microscopy. Curr. Opin. Struct. Biol. 4, 750-760.
4. Born, M. & Wolf, E (1980) Principles of Optics. 6th edn. Pergamon, Oxford.
5. Czajkowsky, D.M., Huang, C. & Shao, Z. (1995) The ripple phase in asymmetric unilamellar bilayers with saturated and unsaturated phospholipids. Biochemistry. 34, 12501-12505.
6. Engel, A. (1991) Biological applications of scanning probe microscopes. Ann. Rev. Biophys. Chem. 20, 79-108.
7. Hansma, P.K., Cleveland, J.P., Radmacher, M., Walters, D.A., Hilner, P.E., Bezanilla, M., Fritz, M., Vie, D. Hansma, H.G., Prater, C.B., Massie, J., Fukunaga, L., Gurley, J. & Elings, V. (1994) Tapping mode atomic force microscope in liquids. Appl. Phys. Lett. 64, 1738-1740.
8. Hansma, H.G. & Hoh, J. (1994) Biomolecular imaging with the atomic force microscope. Ann. Rev. Biophys. Biomol. Struct. 23, 115-128.
9. Hansma, H.G., Vesenka, J., Siegerist, C., Kelderman, G., Morrett, H., Sinsheimer, P.L., Elings, V., Bustamante, C. & Hansma, P.K. (1992) Reproducible imaging and dissection of plasmid DNA under liquid with atomic force microscopy. Science. 256, 1180-1184.
10. Hawkes, P.W. & Kasper, E. (1989) Principles of Electron Optics. Academic. London.
11. Henderson, E., Hayelon, P.G. & Sakaguchi, D.S. (1992) Actin filament dynamics in living glial cells imaged by atomic force microscopy. Science. 257, 1944-1946.
12. Hoh, J., Lal, R., John, S.A., Revel, J.-P. & Arnsdorf, M.F. (1991) Atomic force microscopy and dissection of gap junctions. Science, 253, 1405-1408.
13. Hoh, J. & Schoenenberger, C. (1994) Surface morphology and mechanical properties of MDCK monolayers by atomic force microscopy. J. Cell Sci. 107, 1105-1114.
14. James, H.M. & Guth, E. (1943) Theory of the elastic properties of rubber. J. Chem. Phys. 11, 455-481.
15. James, H.M. & Guth, E. (1947) Theory of the increase in rigidity of rubber during cure. J. Chem. Phys. 15, 669-683.
16. Kuhn, W. (1936) The relation between molecular size, statistical molecular shape and elastic properties of highly polymerized substances. Kolloid Z. Z. Polym. 76, 258-271.
17. Lal, R. & John, S.A. (1994) Biological applications of atomic force microscopy. Am. J. Physiol. 266, C1-23.
18. Landau, L.D. & Lifshitz, E.M. (1976) Theory of Elasticity, 3rd edn. Pergamon. Oxford.
19. Lyubchenko, Y.L., Oden, P.I., Lampner, D., Lindsay, S.M. & Dunker, K.A. (1993) Atomic force microscopy of DNA and bacteriophage in air, water and propanol: the role of adhesion forces. Nucleic Acids Res. 21, 1117-1123.
20. Merritt, E.A., Sarfaty, S., van der Akker, F., L'Hoir, C., Martial, J.A. & Hol, W.G.J. (1994) Crystal structure of cholera toxin B-pentamer bound to receptor GM1 pentasaccharide. Protein Sci. 3, 166-175.
21. Mooney, M. (1940) A theory of large elastic deformations. J. Appl. Phys. 11, 582-592.
22. Mou, J., Czajkowsky, D.M., Sheng, S., Ho, R. & Shao, Z. (1996) High resolution surface structure of E. coli GroES oligomer by atomic force microscopy. FEBS Lett. 381, 161-164.
23. Mou, J., Czajkowsky, D.M., Zhang, Y. & Shao, Z. (1995a) High resolution atomic force microscopy of DNA: the pitch of the double helix. FEBS Lett. 371, 279-282.
24. Mou, J., Yang, J., Huang, C. & Shao, Z. (1994a) Alcohol induces interdigitated domains in unilamellar phospholipid bilayers. Biochemistry. 33, 9981-9985.
25. Mou, J., Yang, J. & Shao, Z. (1994b) Tris induces ripple phase in unilamellar phospholipid bilayers. Biochemistry, 33, 4439-4443.
26. Mou, J., Yang, J. & Shao, Z. (1995b) Atomic force microscopy of cholera toxin B oligomer bound to bilayers of biologically relevant lipids. J. Mol. Biol. 248, 507-512.
27. Ogden, R.W. (1972) Recent advances in the phenomenological theory of rubber elasticity. Rubber Chem. Technol. 59, 361-383.
28. Persson, B.N.J. (1987) The atomic force microscope: can it be used to study biological molecules? Chem. Phys. Lett. 141, 366-368.
29. Radmacher, M., Fritz, M., Cleveland, J.P., Walters, D.A. & Hansma, P.K. (1994) Imaging adhesion forces and elasticity of lysozyme adsorbed on mica with the atomic force microscope. Langmuir. 10, 3809-3814.
30. Radmacher, M., Tillman, R.W., Fritz, M. & Gaub, H.H. (1992) From molecules to cells: imaging soft samples with atomic force microscope. Science, 257, 1900-1905.
31. Rivlin, R.S. (1956) Large elastic deformations. In: Rheology, Theory and Applications. Vol. 1 (ed. by F. R. Eirich), pp. 551-586. Academic. London.
32. Schabert, F.A. & Engel, A. (1994) Reproducible acquisition of E. coli porin surface topography by atomic force microscopy. Biophys. J. 67, 2394-2403.
33. Schabert, F.A., Henn, C. & Engel, A. (1995) Native E. coli OmpF porin surfaces probed by atomic force microscopy. Science, 268, 92-94.
34. Shao, Z. & Yang, J. (1995) Progress in high resolution atomic force microscopy in biology. Q. Rev. Biophys. 28, 195-251.
35. Spin, J.M. & Atkinson, D. (1995) Cryoelectron microscopy of low density lipoprotein in vitreous ice. Biophys. J. 68, 2115-2123.
36. Treloar, L.R.G. (1975) The Physics of Rubber Elasticity, 3rd edn. Clarendon. Oxford.
37. Urry, D.W. (1988) Entropic elastic processes in protein mechanisms. J. Protein Chem. 7, 1-14.
38. Yang, J., Mou, J. & Shao, Z. (1994a) Molecular resolution atomic force microscopy of soluble proteins in solution. Biochim. Biophys. Acta. 1199, 105-114.
39. Yang, J., Mou, J. & Shao, Z. (1994b) Structure and stability of pertussis toxin studied in situ by atomic force microscopy. FEBS Lett. 338, 89-92.
40. Yang, J., Takeyasu, K. & Shao, Z. (1992) Atomic force microscopy of DNA molecules. FEBS Lett. 301, 173-176.
41. Zasadzinski, J.A.N., Helm, C.A., Longo, M.L., Weisenhorn, A.L., Gould, S.A.C. & Hansma, P.K. (1991) Atomic force microscopy of hydrated phosphatidylethanolamine. Biophys. J. 59, 755-760.