Contribution of cutinase serine 42 side chain to the stabilization of the oxyanion transition state

Biochemistry

Volumn 35, Issue 2, 1996, Pages 398-410

  Nicolas, Anne ^a   Egmond, Maarten ^b   Verrips, C Theo ^b   De Vlieg, Jakob ^b   Longhi, Sonia ^a   Cambillau, Christian ^a   Martinez, Chrislaine ^a  

^a Centre National de la Recherche Scientifique   (France)

^b UNILEVER RESEARCH VLAARDINGEN   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; ANION; ASPARAGINE; ASPARTIC ACID; CUTINASE; CYSTEINE PROTEINASE; ESTERASE; HISTIDINE; HYDROLASE; LEUCINE; PAPAIN; SERINE; SERINE PROTEINASE; SUBTILISIN; TRYPTOPHAN;

ARTICLE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME KINETICS; FUNGUS; NONHUMAN; PRIORITY JOURNAL; PROTEIN STABILITY; SITE DIRECTED MUTAGENESIS;

AMINO ACID SEQUENCE; ANIONS; BINDING SITES; CARBOXYLIC ESTER HYDROLASES; CATALYSIS; ELECTROCHEMISTRY; ENZYME STABILITY; FUSARIUM; HYDROLYSIS; KINETICS; LIPID METABOLISM; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; MUTAGENESIS, SITE-DIRECTED; OXYGEN; POINT MUTATION; PROTEIN CONFORMATION;

EID: 0030041250     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9515578     Document Type: Article

References (57)

1. Abergel, C., Martinez, C., Fontecilla-Camps, J., Cambillau, C., De Geus, P., & Lauwereys, M. (1990) J. Mol. Biol. 215, 215-216.
2. Blanchard, H., & James, M. N. G. (1994) J. Mol. Biol. 241, 574-587.
3. Blow, D. M. (1976) Acc. Chem. Res. 9, 145-152.
4. Bourne, Y., Martinez, C., Kerfelec, B., Lombardo, D., Chapus, C., & Cambillau, C. (1994) J. Mol. Biol. 238, 709-732.
5. Brady, L., Brzozowski, A., Derewenda, Z. S., Dodson, R., Dodson, G., Tolley, S., Turkenburg, J. P., Christiansen, L., Huge-Jensen, B., Norskov, L., Thim, L., & Menge, U. (1990) Nature 343, 767-770.
6. Brünger, A. T. (1992) X-PLOR Manual Version 3.1, Yale University Press: New Haven, CT.
7. Brünger, A. T., Karplus, M., & Petsko, G. (1989) Acta Crystallogr. A45, 50-61.
8. Bryan, P., Pantoliano, M. W., Quill, S. G., Hsiao, H., & Poulos, T. (1986) Proc. Natl. Acad. Sci. U.S.A. 83, 3743-3745.
9. Brzozowski, A M., Derewenda, U., Derewenda, Z. S., Dodson, G., Lawson, D., & Turkenburg, J. P. (1991) Nature 351, 491-494.
10. Carter, P., & Wells, J. A. (1990) Proteins: Struct., Funct., Genet. 7, 335-342.
11. Derewenda, U., Swenson, L., Green, R., Wei, Y., Yamaguchi, S., Joerger, R., Haas, M. J., & Derewenda, Z. S. (1994) Protein Eng. 7, 551-557.
12. Duggleby, R. G. (1981) Anal. Biochem. 110, 9-18.
13. Dulau, L., Cheyrou, A., & Aigle, M. (1989) Nucleic Acids Res. 17, 2873.
14. Egloff, M.-P., Marguet, F., Buono, G., Verger, R., Cambillau, C., & van Tilbeurgh, H. (1995) Biochemistry 34, 2751-2762.
15. Engh, R. A., & Hubert, R. (1991) Acta Crystallogr. A47, 392-400.
16. Fersht, A. R., Shi, J. P., Knill-Jones, J., Lowe, D. M., Wilkinson, A. J., Blow, D. M. Brick, P., Wave, M. M. Y., & Winter, G. (1985) Nature 314, 235-238.
17. Grochulski, P., Li, Y., Schrag, J. D., Bouthillier, F., Smith, P., Harrison, D., Rubin, B., & Cygler, M. (1993) J. Biol. Chem. 268, 12843-12847.
18. Grochulski, P., Bouthillier, F., Kazlauskas, R. J., Serreqi, A. N., Schrag, J. D., Ziomek, E., & Cysler, M. (1994) Biochemistry 33, 3494-3500.
19. Ho, S. N., Hunt, H. D., Horton, R. M., Pullen, J. K., & Pease, L. R. (1989) Gene 77, 51-59.
20. Jaeger, K. E., Ransac, S., Dijkstra, B. W., Colson, C., van Heuvel, M., & Misset, O. (1994) FEMS Microbiol. Rev. 15, 29-63.
21. Joerger, R. D., & Haas, M. J. (1994) Lipids 29, 377-384.
22. Kadowaki, H., Kadowaki, T., Wondisford, F. E., & Taylor, S. I. (1989) Gene 76, 161-166.
23. Kabsch, W. (1988) J. Appl. Crystallogr. 21, 916-924.
24. Kolattukudy, P. E. (1984) in Lipases (Borgström, B., & Brockman, H., Eds.) pp 471-504. Elsevier, Amsterdam.
25. Kraut, J. (1977) Annu. Rev. Biochem. 46, 331-358.
26. Lauwereys, M., de Geus, P., de Meutter, J., Stanssens, P., & Matthyssens, G. (1991) in Lipases - Structure, Mechanism and Genetic Engineering (Alberghina, L., et al., Eds.) Vol. 16, pp 243-251 VCH, Weinheim.
27. Liao, D.-L., & Remington, S. J. (1990) J. Biol. Chem. 265, 6528-6531.
28. Lopes, T. S., Klootwijk, J., Veenstra, A. E., van der Aar, P. C., van Heerikhuizen, H., Raue, H. A., & Planta, R. J. (1989) Gene 79, 199-206.
29. Martinez, C. (1992) Thèse de doctorat, Université de Paris XI, Orsay, France.
30. Martinez, C., de Geus, P., Lauwereys, M., Matthyssens, G., & Cambillau, C. (1992) Nature 356, 615-618.
31. Martinez, C., Nicolas, A., van Tilbeurgh, H., Egloff, M.-P., Cudrey, C., Verger, R., & Cambillau, C. (1994) Biochemistry 33, 83-89.
32. Matthews, B. W. (1968) J. Mol. Biol. 33, 491-497.
33. Ménard, R., Carrière, J., Laflamme, P., Plouffe, C., Khouri, H. E., Vernet, T., Tessier, D. C., Thomas, D. Y., & Storer, A. C. (1991) Biochemistry 30, 8924-8928.
34. Navaza, J. (1994) Acta Crystallogr. A50, 157-163.
35. Noble, M. E. M., Cleasby, A., Johnson, L. N., Egmond, M. R., & Frenken, L. G. J. (1994) Protein Eng. 7, 559-562.
36. Ollis, D. L., Cheah, E., Cygler, M., Dijkstra, B., Frolow, F., Franken, S. M., Harel, M., Remington, S. J., Silman, I., Schrag, J., Sussman, J. L., Verschueren, K. H. G., & Goldman, A. (1992) Protein Eng. 5, 197-211.
37. Orr-Weaver, T. L., & Szostak, J. M. (1983) Mol. Cell Biol. 3, 747-749.
38. Pauling, H. (1946) Chem. Eng. News 24, 1375-1377.
39. Rao, S. N., Singh, U. C., Bash, P. A., & Kollman, P. A. (1987) Nature 328, 551-554.
40. Roussel, A., & Cambillau, C. (1991) in Silicon Graphics Directory (Silicon Graphics, Ed.) p 97, Mountain View, CA.
41. Sanger, F., Nicklen, S., & Coulson, A. R. (1980) Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5468.
42. Schrag, J. D., Li, Y., Wu, S., & Cygler, M. (1991) Nature 351, 761-764.
43. Schröder, E., Phillips, C., Garman, E., Harlos, K., & Crawford, C. (1993) FEBS Lett 315, 38-42.
44. Smith, L. M., Fung, S., Hunkapiller, M. W., Hunkapiller, T. J., & Hood, L. E. (1985) Nucleic Acids Res. 13, 2399-2412.
45. Smith, L. M., Sanders, J. Z., Kaiser, R. J., Hughes, P., Dodd, C., Connell, C. R., Heiner, C., Kent, S. B. H., & Hood, L. E. (1986) Nature 321, 674-679.
46. Steinmetz, A. C. U., Demuth, H.-U., & Ringe, D. (1994) Biochemistry 33, 10535-10544.
47. Stroud, R. M., Kay, L. M., & Dickerson, R. E. (1974) J. Mol. Biol. 83, 185-208.
48. Sussman, J. L., Harel, M., Frolow, F., Oefner, C., Goldman, A., Toker, L., & Silman, I. (1991) Science 253, 872-879.
49. Uppenberg, J., Hansen, M. T., Patkar, S., & Jones, T. A. (1994) Structure 2, 293-308.
50. van Tilbeurgh, H., Sarda, L., Verger, R., & Cambillau, C. (1992) Nature 359, 159-162.
51. van Tilbeurgh, H., Egloff, M.-P., Martinez, C., Rugani, N., Verger, R., & Cambillau, C. (1993) Nature 362, 814-820.
52. Warshel, A., Naray-Szabo, G., Sussman, F., & Hwang, J.-K. (1989) Biochemistry 28, 3629-3637.
53. Wei, Y., Schottel, J. L., Derewenda, U., Swenson, L., Patkar, S., & Derewenda, Z. S. (1995) Struct. Biol. 2, 218-223.
54. Wells, J. A., Cunningham, B. C., Graycar, T. P., & Estell, D. A. (1986) Phil. Trans. R. Soc. London A317, 415-423.
55. Whiting, A. K., & Peticolas, W. L. (1994) Biochemistry 33, 552-561.
56. Winkler, F. K., D'Arcy, A., & Hunziker, W. (1990) Nature 343, 771-774.
57. Yamaguchi, S., Mase, T., & Takeuchi, K. (1992) Biosci. Biotech. Biochem. 56, 315-319.