Recognition and detection in seed of the Xanthomonas pathogens that cause cereal leaf streak using rDNA spacer sequences and polymerase chain reaction

Phytopathology

Volumn 86, Issue 1, 1996, Pages 63-69

  Maes, M ^a   Garbeva, P ^a   Kamoen, O ^a  

^a Research Station for Plant Pathology   (Belgium)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0030039311     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/Phyto-86-63     Document Type: Article

References (49)

1. Ahrens, U., and Seemüller, E. 1992. Detection of DNA of plant pathogenic mycoplasmalike organisms by a polymerase chain reaction that amplifies a sequence of the 16S rRNA gene. Phytopathology 82:828-832.
2. Azad, H., and Schaad, N. W. 1988. Serological relationships among membrane proteins of strains of Xanthomonas campestris pv. translucens. Phytopathology 78:272-277.
3. Bragard, C., Verdier, V., and Maraite, H. 1995. Genetic diversity among Xanthomonas campestris strains pathogenic for small grains. Appl. Environ. Microbiol. 61:1020-1026.
4. Bragard, C., and Verhoyen, M. 1993. Monoclonal antibodies specific for Xanthomonas campestris bacteria pathogenic on wheat and other small grain, in comparison with polyclonal antisera. J. Phytopathol. 139:217-228.
5. Brosius, J., Dull, T. J., Sleeter,. D. D., and Noller, H. F. 1981. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148:107-127.
6. Cunfer, B. M., and Scolari, B. L. 1982. Xanthomonas campestris pv. t translucens on triticale and other small grains. Phytopathology 72:683-686.
7. De Bruijn, F. J. 1992. Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergeneric consensus) sequence and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria. Appl. Environ. Microbiol. 58:2180-2187.
8. Demir, G., and Ostün, N. 1992. Studies on bacterial streak disease (Xanthomonas campestris pv. translucens (Jones et al.) Dye.) of wheat and other Gramineae. J. Turk. Phytopathol. 21:33-40.
9. DeParasis, J., and Roth, D. A. 1990. Nucleic acid probes for identification of genus-specific 16S rRNA sequences. Phytopathology 80:618-621.
10. Devereux, J., Haeberli, P., and Smithies, O. 1984. A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res. 12:387-395.
11. Duveiller, E., Bragard, C., and Maraite, H. 1991. Bacterial diseases of wheat in the warmer areas - Reality or myth. Pages 189-202 in: Proceedings of the Wheat for the Nontraditional, Warm Areas International Conference. D. Saunders, ed. UNDP/CIMMYT, Iguazu Falls, Brazil.
12. Dye, D. W., Bradbury, J. F., Goto, M., Hayward, A. C., Lelliott, R. A., and Schroth, M. N. 1980. International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains. Rev. Plant Pathol. 59:153-168.
13. Egli, T., Goto, M., and Schmidt, D. 1975. Bacterial wilt, a new forage grass disease. Phytopathol. Z. 82:111-121.
14. Egli, T., and Schmidt, D. 1982. Pathogenic variation among the causal agents of bacterial wilt of forage grasses. Phytopathol. Z. 104:138-150.
15. Firrao, G. and Bazzi, C. 1994. Specific identification of Xylella fastidiosa using the polymerase chain reaction. Phytopathol. Mediterr. 33:90-92.
16. Firrao, G., Gobbi , E., and Locci, R. 1993. Use of polymerase chain reaction to produce oligonucleotide probes for mycoplasmalike organisms. Phytopathology 83:602-607.
17. Forster, R. L., and Schaad, N. W. 1988. Control of black chaff of wheat with seed treatment and a foundadion seed health program. Plant Dis. 72: 935-938.
18. Forster, R. L., and Schaad, N. W. 1990. Longevity of Xanthomonas campestris pv. translucens in wheat seed under two storage conditions. Proceedings of the 7th International Conference on Plant Pahtogenic Bacteria, Budapest, Hungary.
19. Fourest, E., Rehms, L. D., Sands, D. C., Bjarko, M., and Lund, R. E. 1990. Eradication of Xanthomonas campestris pv. translucens from barley seed with dry heat treatment. Plant Dis. 74:816-818.
20. Fox, G. E., Pechman, K. R., and Woese, C. R. 1997. Comparative cataloging of 16S ribosomal ribonucleic acid: Molecular approach procaryotic systematics. Int. J. Syst. Bacteriol. 27:44-57.
21. Frommel, M. I., and Pazos, G. 1994. Detection of Xanthomonas campestris pv. undulosa infested wheat seeds by combined liquid medium enrichment and ELISA. Plant Pathol. 43:589-596.
22. Kersters, K., Pot, B., Hoste, B., Gillis, M., and De Ley, J. 1989. Protein electrophoresis and DNA:DNA hybridizations of xanthomonads from cereals and grasses. EPPO Bull. 19:51-55.
23. Lane, D. J. 1991. Small subunit ribosomal RNA sequences and primers. Large subunit ribosomal RNA sequences and primers. Pages 148-175 in: Nucleic Acid Techniques in Bacterial Systematics. E. Stackebrandt and M. Goodfellow, eds. John Wiley & Sons, Chichester, England.
24. Leite, R. P., Minsavage, G. V., Bonas, U., and Stall, R. E. 1994. Detection and identification of phytopathogenic Xanthomonas strains by amplification of DNA sequences related to the hrp genes of Xanthomonas campestris pv. vesicatoria. Appl. Environ. Microbiol. 60:1068-1077.
25. Leyns, F., Van den Mooter, M., Swings, J., De Cleene, M., and De Ley, J. 1981. Distribution of Xanthomonas campestris pv. graminis in fields of forage grasses in northern Belgium. Parasitica 37:131-133.
26. Louws, F. J., Fulbright, D. W., Stephens, C. T., and De Bruijn, F. J. 1994. Specific genomic fingerprints of phytopathogenic Xanthomonas and Pseudomonas pathovars and strains generated with repetitive sequences and PCR. Appl. Environ. Microbiol. 60:2285-2295.
27. Maes, M. 1993. Fast classification of plant-associated becteria in the Xanthomonas genus. FEMS Microbiol. Lett. 113:161-166.
28. Milus, E. A., and Mirlohi, A. F. 1995. Survival of Xanthomonas compestris pv. trnaslucens between successive wheat crops in Arkansas. Plant Dis. 79:263-265.
29. Namba, S., Kato, S., Iwanami, S., Oyaizu, H., Shiozawa, H., and Tsuchizaki, T. 1993. Detection and differentiation of plant-phytogenic mycoplasmalike organisms using polymerase chain reaction. Phytopathology 83:786-791.
30. Nazar, R. N., Hu, X., Schmidt, J., Culham, D., and Robb, J. 1991. Potential use of PCR-amplified ribosomal intergenic sequences in the detection and differentiation of Verticillium wilt pathogens. Physiol. Mol. Plant Pathol. 39:1-11.
31. Neergaard, P. 1977. Seed Pathology. Vol. 1. John Wiley & Sons, New York.
32. O'Donnell, K. 1992. Ribosomal DNA internal transcribed spacers are highly divergent in the phytopathogenic ascomycete Fusarium sambucinum (Gibberella pulicaris). Curr. Gent. 22:213-220.
33. Paul, V. H., and Smith, I. M. 1989. Bacterial pathogens of Gramineae: Systematic review and assessment of quarantine status fo the EPPO region. EPPO Bull. 19:33-42.
34. Ponsonnet, C., and Nesme, X. 1994. Identification of Agrobacterium strains by PCR-RFLP analysis of pTi and chromosomal regions. Arch. Microbiol. 161:300-309.
35. Roberts, D. L., Vargas, J. M., Jr., Detweiler, R., Baker, K. K., and Hooper, G. R. 1981. Association of a bacterium with a disease of Toronto creeping bentgrass. Plant Dis. 65:1014-1016.
36. Samson, R., Arfi, A., and Carfil, N. 1989. Quelques critères d'identification des Xanthomonas campestris responsables du dessèchement des Pooceae. EPPO Bull. 19:43-49.
37. Schaad, N. W., and Forster, R. L. 1985. A semiselective agar medium for isolating Xanthomonas campestris pv. translacens from wheat seeds. Phytopathology 75:260-263.
38. Seal, S. E., Jackson, L. A., Young, J. P. W., and Daniels, M. J. 1993. Differentiation of Pseudomonas solanacearum, Pseudomonas syzygii, Pseudomonas pickettii and the Blood Disease Bacterium by partial 16S rDNA sequencing: Construction of oligonucleotide primers for sensitive detection by polymerase chain reaction. J. Gen. Microbiol. 139:1587-1594.
39. Smith, J. J., Scott-Craig, J. S., Leadbetter, J. R., Bush, G. L., Roberts, D. L., and Fulbright, D. W. 1994. Characterization of random amplified polymorphic DNA (RAPD) products from Xanthomonas campestris and some comments on the use of RAPD products in phylogenetic analysis. Mol. Phylogene. Evol. 3:135-145.
40. Srivastava, A. K., and Schlessinger, D. 1990. Mechanism and regulation of bacterial ribosomal RNA processing. Annu. Rev. Microbiol. 44:105-129.
41. Stead, D. E. 1989. Grouping of Xanthomonas campestris pathovars of cereals and grasses by fatty acid profiling. EPPO Bull. 19:57-68.
42. Timmer, L. W., Marois, J. J., and Achor, D. 1987. Growth and survival of xanthomonads under conditions nonconducive to disease development. Phytopathology 77:1341-1345.
43. Vauterin, L., Hoste, B., Kersters, K., and Swings, J. 1995. Reclassification of Xanthomonas. Int. J. Syst. Bacteriol. 45:472-489.
44. Vauterin, L., Yang, P., Hoste, B., Pot, B., Swings, J., and Kersters, K. 1992. Taxonomy of xanthomonads from cereals and grasses based on SDS-PAGE fo proteins, fatty acid analysis and DNA hybridization. J. Gen. Microbiol. 138:1467-1477.
45. Versalovic, J., Koeuth, T., and Lupski, J. R. 1991. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res. 19:6823-6831.
46. Vrain, T. C., Wakarchuk, D. A., Lévesque, A. C., and Hamilton, R. I. 1992. Intraspecific rDNA restriction fragment length polymorphism in the Xiphinema americanum. Fund. Appl. Nematol. 15:563-573.
47. Wilkins, P. W., and Exley, J. K. 1977. Bacterial wilt of rye-grass in Britain. Plant Pathol. 26:99.
48. Woese, C. R., Fox, G. E., Zablen, N., Uchida, T., Bonen, L., Pechman, K., Lewis, B. J., and Stahl, D. 1975. Conservation of primary structue in 16S ribosomal RNA. Nature (Lond.) 254:83-86.
49. Xue, B., Goodwin, P. H., and Annis, S. L. 1992. Pathotype identification o of Leptosphaeria maculans with PCR and oligonucleotide primers from ribosomal internal transcribed spacer sequences. Physiol. Mol. Plant Pathol. 141:179-188.