Critical evaluation of membrane supports for use in quantitative hybridizations

Applied and Environmental Microbiology

Volumn 62, Issue 1, 1996, Pages 300-303

  Raskin, Lutgarde ^a,b   Capman, William C ^b,d   Kane, Matthew D ^b,e   Rittmann, Bruce E ^c   Stahl, David A ^a,b,c  

^a University of Illinois at Urbana Champaign   (United States)

^b UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^c Northwestern University   (United States)

^d AUGSBURG COLLEGE   (United States)

^e DEPARTMENT OF PALEOBIOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; RNA 16S;

ARTICLE; CAULOBACTER; GRAM NEGATIVE BACTERIUM; HYBRIDIZATION; RNA ANALYSIS;

BACTERIA (MICROORGANISMS); CAULOBACTER; NEGIBACTERIA;

EID: 0030038428     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.1.300-303.1996     Document Type: Article

References (11)

1. Gulell, R. R., N. Larsen, and C. R. Woese. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58:10-26.
2. Khandjian, E. W. 1987. Optimized hybridization of DNA blotted and fixed to nitrocellulose and nylon membranes. Bio/Technology 5:165-170.
3. Lin, C., B. Flesher, W. C. Capman, R. I. Amann, and D. A. Stahl. 1994. Taxon specific hybridization probes for fiber-digesting bacteria suggest novel gut-associated Fibrobacter. Syst. Appl. Microbiol. 17:418-424.
4. Raskin, L., W. C. Capman, R. Sharp, L. K. Poulsen, and D. A. Stahl. Molecular ecology of gastrointestinal ecosystems. In R. I. Mackie, B. A. White, and R. E. Isaacson (ed.). Ecology and physiology of gastrointestinal microbes, vol. 2. Gastrointestinal microbiology and host interactions, in press. Chapman & Hall, Ltd., London.
5. Raskin, L., L. K. Poulsen, D. R. Noguera, B. E. Rittmann, and D. A. Stahl. 1994. Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization. Appl. Environ. Microbiol. 60:1241-1248.
6. Raskin, L., J. M. Stromley, B. E. Rittmann, and D. A. Stahl. 1994. Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl. Environ. Microbiol. 60:1232-1240.
7. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
8. Stahl, D. A., and R. Amann. 1991. Development and application of nucleic acid probes, p. 205-248. In E. Stackebrandt and M. Goodfellow (ed.). Nucleic acid techniques in bacterial systematics. John Wiley & Sons. Ltd.
9. Stahl, D. A., B. Flesher, H. R. Mansfield, and L. Montgomery. 1988. Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology. Appl. Environ. Microbiol. 54:1079-1084.
10. Tijssen, P. 1993. Hybridization with nucleic acid probes, part I: theory and nucleic acid precipitation. Elsevier Science Publishers B.V., Amsterdam.
11. Zheng, D., L. Raskin, E. W. Alm, and D. A. Stahl. Unpublished data.