Mechanism of degradation of purine nucleosides by formamide. Implications for chemical DNA sequencing procedures

Journal of the American Chemical Society

Volumn 118, Issue 24, 1996, Pages 5615-5619

  Saladino, Raffaele ^a   Mincione, Enrico ^a   Crestini, Claudia ^a   Negri, Rodolfo ^b   Di Mauro, Ernesto ^b,c   Costanzo, Giovanna ^c  

^a UNIVERSITY OF TUSCIA   (Italy)

^b CNR   (Italy)

^c SAPIENZA UNIVERSITY OF ROME   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

DEOXYADENOSINE; DEOXYGUANOSINE; FORMAMIDE; POLYNUCLEOTIDE; PURINE DERIVATIVE;

ARTICLE; DNA DEGRADATION; IN VITRO STUDY; MODEL; REACTION ANALYSIS;

EID: 0030036933     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja953527y     Document Type: Article

References (32)

1. Maxam, A. M.; Gilbert, W. Proc. Natl. Acad. Sci. US.A. 1977, 74, 560-563.
2. Sanger, F.; Nicklen, S.; Coulson, A. R. Proc. Natl. Acad. Sci. U.S.A. 1977, 74, 5463-5467.
3. Nelson, M.; Zang, Y.; Steffens, D.; Grabherr, R.; van Hetten, J. L. Proc. Natl. Acad. Sci. U.S.A. 1993, 90, 1647-1651.
4. Ansorge, W.; Zimmermann, J.; Schwarger, C.; Stegemann, J.; Erfle, H.; Voss H. Nucleic Acids Res. 1987, 18, 3419-3420.
5. Ambrose, B. J. B.; Pless, R. C. Methods Enzymol. 1987, 152, 522-538.
6. Testoff, M. A.; Pless, R. C. Anal. Biochem. 1991, 197, 316-320.
7. Rosenthal, A. Methods in Molecular Biology; Human Press: New York, 1993; Griffin, H., & Griffin, A., Eds.; Vol. 23, pp 261-280.
8. Negri, R.; Costanzo, G.; Di Mauro, E. Anal. Biochem. 1991, 197, 389-395.
9. Ferraboli, S.; Negri, R.; Di Mauro, E.; Barlati, S. Anal. Biochem. 1993, 214, 566-570.
10. Negri, R.; Ferraboli, S.; Barlati, S.; Di Mauro, E. Nucleic Acid Res. 1994, 22, 111-112.
11. Di Mauro, E.; Costanzo, G.; Negri, R. Nucleic Acids Res. 1994, 22, 3811-3812.
12. Erlich, H. A. PCR Technology: Principles and application for DNA amplification; Stockton Press: 1989.
13. (a) Mian, A. M.; Walker, R. T. J. Chem. Soc. 1968, (C), 2577.
14. (b) Price, C. C.; Gache, G. M.; Koneru, P.; Shibakawa, R.; Sawa, J.R.; Yamaguchi, M. Biochim. Biophys. Acta 1968, 166, 327.
15. (c) Lawley, P. D.; Brookes, P. J. Mol. Biol. 1967, 25, 143.
16. (d) Townsed, L. B.; Robins, R. K. J. Am. Chem. Soc. 1963, 85, 247. In Synthetic procedures in nucleic acid chemistry; Zorbach, W. W., Tpson, R. S., Eds.; Wiley: New York-London, 1968; p 315.
17. (d) Townsed, L. B.; Robins, R. K. J. Am. Chem. Soc. 1963, 85, 247. In Synthetic procedures in nucleic acid chemistry; Zorbach, W. W., Tpson, R. S., Eds.; Wiley: New York-London, 1968; p 315.
18. (e) Magrath, D. I.; Brown, G. B. J. Am. Chem. Soc. 1957, 79, 3245.
19. (f) Gordon, M. P.; Weliky, V. S.; Brown, G. B. J. Am. Chem. Soc. 1957, 79, 3245.
20. (g) Lawley, P. D. Proc. Chem. Soc. 1957, 290.
21. Ali, S. L. Chromatographia 1975, 8, 33-39.
22. Pullman, B.; Jortner J. Molecular basis of specificity in nucleic acids-drug interactions; Kluwer Academic: Dortrecht, 1961.
23. Verwoerd, D. W.; Zillig, W.; Kohlage, H. Z. Physiol. Chem. 1963, 332, 184-193.
24. Fornace, A. J.; Little, J. B. Biochim. Biophys. Acta 1977, 477, 343-355.
25. Ward, J. F. Isr. J. Chem. 1972, 10, 1123-1138.
26. Phillips, G. O.; Criddle, W. J. J. Chem. Soc. 1962, 2740-2744.
27. Chetsanga, C.; Grigorian, C. Proc. Natl. Acad. Sci. U.S.A. 1985, 82, 633-637.
28. Tabor, S.; Richardson, C. C. J. Biol. Chem. 1989, 264, 6447-6450.
29. Dizdaroglu, M. Anal. Biochem 1985, 144, 593-603.
30. Dizdaroglu, M.; Bergtold, D. S. Anal. Biochem. 1986, 156, 182-188.
31. Denayer, R. Bull. Soc. Chim. Fr. 1962, 1358-1364.
32. Kuwabara, M. D.; Sigman, D. S. Biochemistry 1987, 26, 7234-7238.