메뉴 건너뛰기




Volumn 143, Issue 2, 1996, Pages 673-683

A novel Ty1-mediated fragmentation method for native and artificial yeast chromosomes reveals that the mouse steel gene is a hotspot for Ty1 integration

Author keywords

[No Author keywords available]

Indexed keywords

GENE EXPRESSION; GENE INSERTION; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GENOTYPE; NONHUMAN; PRIORITY JOURNAL; RETROPOSON; REVIEW; YEAST ARTIFICIAL CHROMOSOME;

EID: 0030032142     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (10)

References (46)
  • 1
    • 0023392267 scopus 로고
    • A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains
    • ALANI, E., L. CAO and N. KLECKNER, 1987 A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains. Genetics 116: 541-545.
    • (1987) Genetics , vol.116 , pp. 541-545
    • Alani, E.1    Cao, L.2    Kleckner, N.3
  • 2
    • 0025900189 scopus 로고
    • Modifiers of position effect are shared between telomeres and silent mating-type loci in S. cerevisiae
    • APARICIO, O. M., B. L. BILLINGTON and D. E. GOTTSCHLING, 1991 Modifiers of position effect are shared between telomeres and silent mating-type loci in S. cerevisiae. Cell 66: 1279-1287.
    • (1991) Cell , vol.66 , pp. 1279-1287
    • Aparicio, O.M.1    Billington, B.L.2    Gottschling, D.E.3
  • 3
    • 0029006769 scopus 로고
    • A YAC contig map containing the reeler locus with preliminary characterization of candidate gene fragments
    • BAR, I., C. LAMBERT DE ROUVROIT, I. ROYAUX, D. B. KRIZMAN, C. DERNONCOURT et al., 1995 A YAC contig map containing the reeler locus with preliminary characterization of candidate gene fragments. Genomics 26: 543-549.
    • (1995) Genomics , vol.26 , pp. 543-549
    • Bar, I.1    Lambert De Rouvroit, C.2    Royaux, I.3    Krizman, D.B.4    Dernoncourt, C.5
  • 4
    • 0029899578 scopus 로고
    • Multiple pathways for Steel regulation suggested by genomic and sequence analysis of the murine Steel gene
    • BEDELL, M. A., N. G. COPELAND and N. A. JENKINS, 1995a Multiple pathways for Steel regulation suggested by genomic and sequence analysis of the murine Steel gene, Genetics 142: 927-934.
    • (1995) Genetics , vol.142 , pp. 927-934
    • Bedell, M.A.1    Copeland, N.G.2    Jenkins, N.A.3
  • 6
    • 0000368742 scopus 로고
    • Yeast transposable elements
    • edited by J. R. BROACH, J. PRINGLE and E. JONES. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • BOEKE, J. D., and S. B. SANDMEYER, 1991 Yeast transposable elements, pp. 193-262 in The Molecular and Cellular Biology of the Yeast Saccharomyces, edited by J. R. BROACH, J. PRINGLE and E. JONES. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1991) The Molecular and Cellular Biology of the Yeast Saccharomyces , pp. 193-262
    • Boeke, J.D.1    Sandmeyer, S.B.2
  • 7
    • 0021799352 scopus 로고
    • Ty elements transpose through an RNA intermediate
    • BOEKE, J. D., D. J. GARFINKEL, C. A. STYLES and G. R. FINK, 1985 Ty elements transpose through an RNA intermediate. Cell 40: 491-500.
    • (1985) Cell , vol.40 , pp. 491-500
    • Boeke, J.D.1    Garfinkel, D.J.2    Styles, C.A.3    Fink, G.R.4
  • 8
    • 0023484186 scopus 로고
    • 5-Fluoroorotic acid as a selective agent in yeast molecular genetics
    • BOEKE, J. D., J. TRUEHEART, G. NATSOULIS and G. R. FINK, 1987 5-Fluoroorotic acid as a selective agent in yeast molecular genetics. Methods Enzymol. 154: 164-175.
    • (1987) Methods Enzymol. , vol.154 , pp. 164-175
    • Boeke, J.D.1    Trueheart, J.2    Natsoulis, G.3    Fink, G.R.4
  • 9
    • 0024286690 scopus 로고
    • A general method for the chromosomal amplification of genes in yeast
    • BOEKE, J. D., H. XU and G. R. FINK, 1988 A general method for the chromosomal amplification of genes in yeast. Science 239: 280-282.
    • (1988) Science , vol.239 , pp. 280-282
    • Boeke, J.D.1    Xu, H.2    Fink, G.R.3
  • 10
    • 0028215472 scopus 로고
    • Large-scale analysis of gene expression, protein localization and gene disruption in Sacrharomyces cerevisiae
    • BURNS, N., B. GRIMWADE, P. B. ROSS-MACDONALD, E.-Y. CHOI, K. FINBERG et al., 1994 Large-scale analysis of gene expression, protein localization and gene disruption in Sacrharomyces cerevisiae. Genes Dev. 8: 1087-1105.
    • (1994) Genes Dev. , vol.8 , pp. 1087-1105
    • Burns, N.1    Grimwade, B.2    Ross-Macdonald, P.B.3    Choi, E.-Y.4    Finberg, K.5
  • 11
    • 0027207514 scopus 로고
    • Rapid physical mapping of YAC inserts by random integration of I-Sce I sites
    • COLLEAUX, L., C. ROUGEULLE, P. AVNER and B. DUJON, 1993 Rapid physical mapping of YAC inserts by random integration of I-Sce I sites. Hum. Mol. Genet. 2: 265-271.
    • (1993) Hum. Mol. Genet. , vol.2 , pp. 265-271
    • Colleaux, L.1    Rougeulle, C.2    Avner, P.3    Dujon, B.4
  • 12
    • 0026637378 scopus 로고
    • Hotspots and warm spots: Integration specificity of retroelements
    • CRAIGIE, R. 1992 Hotspots and warm spots: integration specificity of retroelements. Trends Genet. 8: 187-190.
    • (1992) Trends Genet. , vol.8 , pp. 187-190
    • Craigie, R.1
  • 13
    • 0026082573 scopus 로고
    • Single-step selection for Ty1 element retrotransposition
    • CURCIO, M. J., and D. J. GARFINKEL. 1991 Single-step selection for Ty1 element retrotransposition. Proc. Natl. Acad. Sci. USA 88: 936-940.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 936-940
    • Curcio, M.J.1    Garfinkel, D.J.2
  • 14
    • 0026636672 scopus 로고
    • Posttranslational control of Ty1 retrotransposition occurs at the level of protein processing
    • CURCIO, M. J., and D. J. GARFINKEL, 1992 Posttranslational control of Ty1 retrotransposition occurs at the level of protein processing. Mol. Cell. Biol. 12: 2813-2825.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 2813-2825
    • Curcio, M.J.1    Garfinkel, D.J.2
  • 15
    • 0027190470 scopus 로고
    • A site-specific endonuclease encoded by a typical archaeal intron
    • DALGAARD, J. Z., R. A. GARRETT and M. BELFORT, 1993 A site-specific endonuclease encoded by a typical archaeal intron. Proc. Natl. Acad. Sci. USA 90: 5414-5417.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 5414-5417
    • Dalgaard, J.Z.1    Garrett, R.A.2    Belfort, M.3
  • 16
    • 0027999532 scopus 로고
    • Purification and characterization of two forms of I-DmoI, a thermophilic site-specific endonuclease encoded by an archaeal intron
    • DALGAARD, J. Z., R. A. GARRETT and M. BELFORT, 1994 Purification and characterization of two forms of I-DmoI, a thermophilic site-specific endonuclease encoded by an archaeal intron. J. Biol. Chem. 269: 28885-28892.
    • (1994) J. Biol. Chem. , vol.269 , pp. 28885-28892
    • Dalgaard, J.Z.1    Garrett, R.A.2    Belfort, M.3
  • 17
    • 0021250005 scopus 로고
    • Preferential integration of yeast transposable element Ty1 into a promoter region
    • EIBEL, H., and P. PHILIPPSEN, 1984 Preferential integration of yeast transposable element Ty1 into a promoter region. Nature 307: 386-388.
    • (1984) Nature , vol.307 , pp. 386-388
    • Eibel, H.1    Philippsen, P.2
  • 18
    • 0020340901 scopus 로고
    • Ty1 and delta elements occur adjacent to several tRNA genes in yeast
    • EIGEL, A., and H. FELDMANN, 1982 Ty1 and delta elements occur adjacent to several tRNA genes in yeast. EMBO J. 1: 1245-1250.
    • (1982) EMBO J. , vol.1 , pp. 1245-1250
    • Eigel, A.1    Feldmann, H.2
  • 20
    • 0025975310 scopus 로고
    • Positional mapping of genes by chromosome blotting and chromosome fragmentation
    • edited by C. GUTHRIE and G. R. FINK. Academic Press, San Diego
    • GERRING, S. L., C. CONNELLY and P. HIETER, 1991 Positional mapping of genes by chromosome blotting and chromosome fragmentation, pp. 57-76 in Guide to Yeast Genetics and Molecular Biology, edited by C. GUTHRIE and G. R. FINK. Academic Press, San Diego.
    • (1991) Guide to Yeast Genetics and Molecular Biology , pp. 57-76
    • Gerring, S.L.1    Connelly, C.2    Hieter, P.3
  • 21
    • 0020529962 scopus 로고
    • Transformation of intact yeast cells treated with alkali cations
    • ITO, H., Y. FUKUDA, K. MURATA and A. KIMURA, 1983 Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153: 163-168.
    • (1983) J. Bacteriol. , vol.153 , pp. 163-168
    • Ito, H.1    Fukuda, Y.2    Murata, K.3    Kimura, A.4
  • 22
    • 0027192351 scopus 로고
    • Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences
    • JI, H., D. P. MOORE, M. A. BLOMBERG, L. T. BRAITERMAN, D. F. VOYTAS et al., 1993 Hotspots for unselected Ty1 transposition events on yeast chromosome III are near tRNA genes and LTR sequences. Cell 73: 1007-1018.
    • (1993) Cell , vol.73 , pp. 1007-1018
    • Ji, H.1    Moore, D.P.2    Blomberg, M.A.3    Braiterman, L.T.4    Voytas, D.F.5
  • 23
    • 0026651651 scopus 로고
    • Ty element-induced temperature-sensitive mutations of Saccharomyces cerevisiae
    • KAWAKAMI, K., B. K. SHAFER, D. J. GARFINKEL, J. N. STRATHERN and Y. NAKAMURA, 1992 Ty element-induced temperature-sensitive mutations of Saccharomyces cerevisiae. Genetics 131: 821-832.
    • (1992) Genetics , vol.131 , pp. 821-832
    • Kawakami, K.1    Shafer, B.K.2    Garfinkel, D.J.3    Strathern, J.N.4    Nakamura, Y.5
  • 24
    • 0025153029 scopus 로고
    • Cleaving yeast and Escherichia coli genomes at a single site
    • KOOB, M., and W. SZYBALSKI, 1990 Cleaving yeast and Escherichia coli genomes at a single site. Science 250: 271-273.
    • (1990) Science , vol.250 , pp. 271-273
    • Koob, M.1    Szybalski, W.2
  • 25
    • 0027366843 scopus 로고
    • Construction of a large-insert yeast artificial chromosome library of the mouse genome
    • KUSUMI, K., J. S. SMITH, J. A. SEGRE, D. S. KOOS and E. S. LANDER, 1993 Construction of a large-insert yeast artificial chromosome library of the mouse genome. Mamm. Genome 4: 391-392.
    • (1993) Mamm. Genome , vol.4 , pp. 391-392
    • Kusumi, K.1    Smith, J.S.2    Segre, J.A.3    Koos, D.S.4    Lander, E.S.5
  • 26
    • 0025897085 scopus 로고
    • Yeast artificial chromosome libraries containing large inserts from mouse and human DNA
    • LARIN, Z., A. P. MONACO and H. LEHRACH, 1991 Yeast artificial chromosome libraries containing large inserts from mouse and human DNA. Proc. Natl. Acad. Sci. USA 88: 4123-4127.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 4123-4127
    • Larin, Z.1    Monaco, A.P.2    Lehrach, H.3
  • 27
    • 0027398975 scopus 로고
    • A ubiquitin-conjugating enzyme, RAD6, affects the distribution of Ty1 retrotransposon integration positions
    • LIEBMAN, S. W., and G. NEWNAM, 1993 A ubiquitin-conjugating enzyme, RAD6, affects the distribution of Ty1 retrotransposon integration positions. Genetics 133: 499-508.
    • (1993) Genetics , vol.133 , pp. 499-508
    • Liebman, S.W.1    Newnam, G.2
  • 28
    • 0027236788 scopus 로고
    • Genomic mapping with I-CeuI, an intron-encoded endonuclease specific for genes for ribosomal RNA, in Salmonella spp., Escherichia coli, and other bacteria
    • LIU, S. L., A. HESSEL and K. E. SANDERSON, 1993 Genomic mapping with I-CeuI, an intron-encoded endonuclease specific for genes for ribosomal RNA, in Salmonella spp., Escherichia coli, and other bacteria. Proc. Natl. Acad. Sci. USA 90: 6874-6878.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 6874-6878
    • Liu, S.L.1    Hessel, A.2    Sanderson, K.E.3
  • 29
    • 0001273526 scopus 로고
    • Homing endonucleases
    • edited by S. M. LINN, R. S. LLOYD and R. J. ROBERTS. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • MUELLER, J. E., M. BRYK, N. LOIZOS and M. BELFORT, 1993 Homing endonucleases, pp. 111-143 in Nucleases, edited by S. M. LINN, R. S. LLOYD and R. J. ROBERTS. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) Nucleases , pp. 111-143
    • Mueller, J.E.1    Bryk, M.2    Loizos, N.3    Belfort, M.4
  • 31
    • 0021108032 scopus 로고
    • Non-random distribution of the Ty1 elements within nuclear DNA of Saccharomyces cerevisiae
    • OYEN, T. B., and O. S. GABRIELSEN, 1983 Non-random distribution of the Ty1 elements within nuclear DNA of Saccharomyces cerevisiae. FEBS Lett. 161: 201-206.
    • (1983) FEBS Lett. , vol.161 , pp. 201-206
    • Oyen, T.B.1    Gabrielsen, O.S.2
  • 32
    • 0022630384 scopus 로고
    • Ty insertions at two loci account for most of the spontaneous antimycin A resistance mutations during growth at 15°C of Saccharomyces cerevisiae strains lacking ADH1
    • PAQUIN, C. E., and V. M. WILLIAMSON, 1986 Ty insertions at two loci account for most of the spontaneous antimycin A resistance mutations during growth at 15°C of Saccharomyces cerevisiae strains lacking ADH1. Mol. Cell. Biol. 6: 70-79.
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 70-79
    • Paquin, C.E.1    Williamson, V.M.2
  • 33
    • 0025037630 scopus 로고
    • Generation of deletion derivatives by targeted transformation of human-derived yeast artificial chromosomes
    • PAVAN, W. J., P. HIETER and R. H. REEVES, 1990 Generation of deletion derivatives by targeted transformation of human-derived yeast artificial chromosomes. Proc. Natl. Acad. Sci. USA 87: 1300-1304.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 1300-1304
    • Pavan, W.J.1    Hieter, P.2    Reeves, R.H.3
  • 34
    • 0029067948 scopus 로고
    • Site-specific cleavage of chromosomes in vitro through Cre-lox recombination
    • QIN, M., E. LEE, T. ZANKLE and D. W. OW, 1995 Site-specific cleavage of chromosomes in vitro through Cre-lox recombination. Nucleic Acids Res. 23: 1923-1927.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1923-1927
    • Qin, M.1    Lee, E.2    Zankle, T.3    Ow, D.W.4
  • 35
    • 77049310288 scopus 로고
    • Studies of gene mutation in Saccharomyces
    • ROMAN, H., 1956 Studies of gene mutation in Saccharomyces. Cold Spring Harbor Symp. Quant. Biol. 21: 175-185.
    • (1956) Cold Spring Harbor Symp. Quant. Biol. , vol.21 , pp. 175-185
    • Roman, H.1
  • 37
    • 0025674324 scopus 로고
    • Integration specificity of retrotransposons and retroviruses
    • SANDMEYER, S. B., L. J. HANSEN and D. L. CHALKER, 1990 Integration specificity of retrotransposons and retroviruses. Annu. Rev. Genetics 24: 491-518.
    • (1990) Annu. Rev. Genetics , vol.24 , pp. 491-518
    • Sandmeyer, S.B.1    Hansen, L.J.2    Chalker, D.L.3
  • 38
    • 0019957902 scopus 로고
    • Reversion of a promoter deletion in yeast
    • SCHERER, S., C. MANN and R. W. DAVIS, 1982 Reversion of a promoter deletion in yeast. Nature 298: 815-819.
    • (1982) Nature , vol.298 , pp. 815-819
    • Scherer, S.1    Mann, C.2    Davis, R.W.3
  • 39
    • 0024292602 scopus 로고
    • Highly preferred targets for retrovirus insertion
    • SHIH, C.-C., J. P. STOYE and J. M. COFFIN, 1988 Highly preferred targets for retrovirus insertion. Cell 53: 531-537.
    • (1988) Cell , vol.53 , pp. 531-537
    • Shih, C.-C.1    Stoye, J.P.2    Coffin, J.M.3
  • 40
    • 0028065054 scopus 로고
    • Yeast kar1 mutants provide an effective method for YAC transfer to new hosts
    • SPENCER, F., Y. HUGERAT, G. SIMCHEN, O. HURKO, C. CONNELLY et al., 1994 Yeast kar1 mutants provide an effective method for YAC transfer to new hosts. Genomics 22: 118-126.
    • (1994) Genomics , vol.22 , pp. 118-126
    • Spencer, F.1    Hugerat, Y.2    Simchen, G.3    Hurko, O.4    Connelly, C.5
  • 41
    • 0025201631 scopus 로고
    • The ADE2 gene from Saccharomyces cerevisiae: Sequence and new vectors
    • STOTZ, A., and P. LINDER, 1990 The ADE2 gene from Saccharomyces cerevisiae: sequence and new vectors. Gene 95: 91-98.
    • (1990) Gene , vol.95 , pp. 91-98
    • Stotz, A.1    Linder, P.2
  • 43
    • 0026437552 scopus 로고
    • Nested chromosomal fragmentation in yeast using the meganuclease I-SceI: A new method for physical mapping of eucaryotic genomes
    • THIERRY, A., and B. DUJON, 1992 Nested chromosomal fragmentation in yeast using the meganuclease I-SceI: a new method for physical mapping of eucaryotic genomes. Nucleic Acids Res. 20: 5625-5631.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5625-5631
    • Thierry, A.1    Dujon, B.2
  • 44
    • 0026064219 scopus 로고
    • Cleavage of yeast and bacteriophage T7 genomes at a single site using the rare cutter endonuclease I-SceI
    • THIERRY, A., A. PERRIN, J. BOYER, C. FAIRHEAD, B. DUJON et al., 1991 Cleavage of yeast and bacteriophage T7 genomes at a single site using the rare cutter endonuclease I-SceI. Nucleic Acids Res. 19: 189-190.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 189-190
    • Thierry, A.1    Perrin, A.2    Boyer, J.3    Fairhead, C.4    Dujon, B.5
  • 45
    • 0024368680 scopus 로고
    • Analysis of yeast retrotransposon Ty insertions at the CAN1 locus
    • WILKE, C. M., S. H. HEIDLER, N. BROWN and S. W. LIEBMAN, 1989 Analysis of yeast retrotransposon Ty insertions at the CAN1 locus. Genetics 123: 655-665.
    • (1989) Genetics , vol.123 , pp. 655-665
    • Wilke, C.M.1    Heidler, S.H.2    Brown, N.3    Liebman, S.W.4
  • 46
    • 0024403294 scopus 로고
    • Control of gene expression by artificial introns in Saccharomyces cerevisiae
    • YOSHIMATSU, T., and F. NAGAWA, 1989 Control of gene expression by artificial introns in Saccharomyces cerevisiae. Science 244: 1346-1348.
    • (1989) Science , vol.244 , pp. 1346-1348
    • Yoshimatsu, T.1    Nagawa, F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.