Application of combined mass spectrometry and partial amino acid sequence to the identification of gel-separated proteins

Electrophoresis

Volumn 17, Issue 5, 1996, Pages 877-891

  Patterson, Scott D ^a   Thomas, Didier ^b   Bradshaw, Ralph A ^b  

^a AMGEN INC   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Affinity chromatography; Electroblotting; Electrophoresis; Mass spectrometry; Peptide mapping; Protein identification

Indexed keywords

AFFINITY CHROMATOGRAPHY; AMINO ACIDS; CELL CULTURE; CELLS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; PEPTIDES; SODIUM DODECYL SULFATE; SULFUR COMPOUNDS;

AMINO ACID SEQUENCE; CELL EXTRACTS; CELL LYSATES; CHEMICAL SEQUENCING; ELECTROBLOTTING; NERVE GROWTH FACTOR; PC12 CELLS; PEPTIDE MAPPING; PROTEIN IDENTIFICATION; SEQUENCE INFORMATIONS;

ELECTROPHORESIS;

NERVE GROWTH FACTOR;

AMINO ACID SEQUENCE; ANIMAL CELL; CELL DIFFERENTIATION; CELL LINE; CONFERENCE PAPER; CONTROLLED STUDY; GEL ELECTROPHORESIS; IMMUNOBLOTTING; MASS SPECTROMETRY; NONHUMAN; PEPTIDE MAPPING; PHEOCHROMOCYTOMA CELL; PROTEIN ANALYSIS; RAT; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; SIGNAL TRANSDUCTION; TECHNIQUE;

EID: 0030028209     PISSN: 01730835     EISSN: None     Source Type: Journal    
DOI: 10.1002/elps.1150170509     Document Type: Conference Paper

References (47)

1. Patterson, S. D., Anal. Biochem. 1994, 221, 1-15.
2. Cottrell, J. S., Pept. Res. 1994, 7, 115-124.
3. Patterson, S. D., Aebersold, R., Electrophoresis 1995, 16, 1791-1814.
4. Mann, M, Wilm, M., Anal. Chem. 1994, 66, 4390-4399.
5. Mann, M., in: Kellner, R., Lottpeich, F., Meyer, H. E. (Eds.), Microcharacterization of Proteins, VCH, Weinheim 1994, pp. 223-245.
6. Cordwell, S. J., Wilkins, M. R., Cerpa-Poljak, A., Gooley, A. A., Duncan, M., Williams, K. L., Humphery-Smith, I., Electrophoresis 1995, 16, 438-443.
7. Wasinger, V. C., Cordwell, S. J., Cerpa-Poljak, A., Yan, J. X., Gooley, A. A., Wilkins, M. R., Duncan, M. W., Harris, R., Williams, K. L., Humphery-Smith, I., Electrophoresis 1995, 16, 1090-1094.
8. Wilkins, M. R., Sanchez, J.-C., Gooley, A. A., Appel, R. D., Humphery-Smith, I., Hochstrasser, D. F., Williams, K. L., Biotech. Gen. Eng. Reviews 1995, 30, 19-50.
9. Clauser, K. R., Hall, S. C., Smith, D. M., Webb, J. W., Andrews, L. E., Tran, H. M., Epstein, L. B., Burlingame, A. L., Proc. Natl. Acad. Sci. USA 1995, 92, 5072-5076.
10. Reid, G. E., Ji, H., Eddes, J. S., Moritz, R. L., Simpson, R. J., Electrophoresis 1995, 16, 1120-1130.
11. Sutton, C. W., Pemberton, K. S., Cottrell, J. S., Corbett, J. M., Wheeler, C. H., Dunn, M. J., Pappin, D. J., Electrophoresis 1995, 16, 308-316.
12. Gold, M. R., Yungwirth, T., Sutherland, C. L., Ingham, R. J., Vianzon, D., Chiu, R., van Oostveen, I., Morrison, H. D., Aebersold, R., Electrophoresis 1994, 15, 441-453.
13. Ji, H., Whitehead, R. H., Reid, G. E., Moritz, R. L., Ward, L. D., Simpson, R. J., Electrophoresis 1994, 15, 391-405.
14. Rasmussen, H. H., Mortz, E., Mann, M., Roepstorff, P., Celis, J. E., Electrophoresis 1994, 15, 406-416.
15. Thomas, D., Patterson, S. D., Bradshaw, R. A., J. Biol. Chem. 1995, 270, 28924-28931.
16. Greene, L. A., Tischler, A. S., Proc. Natl. Acad. Sci. USA 1976, 73, 2424-2428.
17. Kaplan, D. R., Hempstead, B. L., Martin Zanca, D., Chao, M. V., Parada, L. F., Science 1991, 252, 554-558.
18. Kaplan, D. R., Martin Zanca, D., Parada, L. F., Nature 1991, 350, 158-160.
19. Klein, R., Jing, S. Q., Naduri, V., O'Rourke, E., Barbacid, M., Cell 1991, 65, 189-197.
20. Pelicci, G., Lanfrancone, L., Grignani, F., McGlade, J., Cavallo, F., Forni, G., Nicoletti, I., Grignani, F., Pawson, T., Pelicci, P. G., Cell 1992, 70, 93-104.
21. Kavanaugh, W. M., Williams, L. T., Science 1994, 266, 1862-1865.
22. Cohen, G. B., Ren, R., Baltimore, D., Cell 1995, 80, 237-248.
23. Pawson, T., Nature 1995, 373, 573-580.
24. Schlessinger, J., Curr. Opin. Genet. Dev. 1994, 4, 25-30.
25. Obermeier, A., Bradshaw, R. A., Seedorf, K., Choidas, A., Schles-singer, J., Ullrich, A., EMBO J. 1994, 13, 1585-1590.
26. Mobley, W. C., Schenker, A., Shooter, E. M., Biochemistry 1976, 5, 5543-5552.
27. Patterson, S. D., Hess, D., Yungwirth, T., Aebersold, R., Anal. Biochem. 1992, 202, 193-203.
28. Hess, D., Covey, T. C., Winz, R., Brownsey, R. W., Aebersold, R., Protein Sci. 1993, 2, 1342-1351.
29. Zhang, W., Czernik, A. J., Yungwirth, T., Aebersold, R., Chait, B. T., Protein Sci. 1994, 3, 677-686.
30. Patterson, S. D., Electrophoresis 1995, 16, 1104-1114.
31. Patterson, S. D., Katta, V., Anal. Chem. 1994, 66, 3727-3732.
32. Mann, M., Hojrup, P., Roepstorff, P., Biol. Mass Spectrom. 1993, 22, 338-345.
33. Bonner, R., Shushan, B., Rapid Commun. Mass Spectrom. 1995, 9, 1077-1080.
34. Bonner, R., Shushan, B., Rapid Commun. Mass. Spectrom. 1995, 9, 1067-1076.
35. Pappin, D. J. C., Hojrup, P., Bleasby, A. J., Curr. Biol. 1993, 3, 327-332.
36. James, P., Quadroni, M., Carafoli, E., Gonnet, G., Biochem. Biophys. Res. Commun. 1993, 195, 58-64.
37. James, P., Quadroni, M., Carafoli, E., Gonnet, G., Protein Sci. 1994, 3, 1347-1350.
38. Bleasby, A. J., Wootton, J. C., Protein Eng. 1990, 3, 153-159.
39. Spengler, B., Lutzenkirchen, F., Kaufmann, R., Org. Mass Spectrom. 1993, 28, 1482-1490.
40. Biemann, K., Methods Enzymol. 1990, 193, 886-887.
41. Smith, D. B., Johnson, K. S., Gene 1988, 67, 31-40.
42. Kaufmann, R., Kirsch, D., Tourmann, J. L., Machold, J., Hucho, F., Utkin, Y., Tsetlin, V., Eur. Mass Spectrom. 1995, 1, 313-325.
43. Henzel, W. J., Billed, T. M., Stults, J. T., Wong, S. C., Grimley, C., Watanabe, C., Proc. Natl. Acad. Sci. USA 1993, 90, 5011-5015.
44. Yates, J. R., III., Speicher, S., Griffin, P. R., Hunkapiller, T., Anal. Biochem. 1993, 214, 397-408.
45. Elicone, C., Lui, M., Geromanos, S., Erdjument-Bromage, H., Tempst, P., J. Chromatogr. A 1994, 676, 121-137.
46. Tempst, P., Erdjument-Bromage, H., Casteels, P., Geromanos, S., Lui, M., Powell, M., Nelson, R. W., in: Burlingame, A. L., Carr, S. A. (Eds.), Mass Spectrometry in the Biological Sciences, Humana Press, Totowa, NJ 1955, pp. 105-133.
47. Roepstorff, P., Fohlman, J., Biomed. Mass Spectrom. 1984, 11, 601-612.