Salmonella typhimurium cobalamin (vitamin B12) biosynthetic genes: Functional studies in S. typhimurium and Escherichia coli

Journal of Bacteriology

Volumn 178, Issue 3, 1996, Pages 753-767

  Raux, Evelyne ^a,c   Lanois, Anne ^a   Levillayer, Florence ^a   Warren, Martin J ^c   Brody, Edward ^a   Rambach, Alain ^b   Thermes, Claude ^a  

^a CNRS   (France)

^b CHROMagar   (France)

^c UNIVERSITY COLLEGE LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COBALT; CYANOCOBALAMIN;

ARTICLE; BACTERIAL GENE; BACTERIAL GROWTH; BACTERIUM ISOLATION; ESCHERICHIA COLI; MOLECULAR CLONING; NONHUMAN; OPERON; PRIORITY JOURNAL; PSEUDOMONAS; SALMONELLA TYPHIMURIUM; VITAMIN METABOLISM;

AMINO ACID SEQUENCE; BASE SEQUENCE; COBALT; ESCHERICHIA COLI; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; MUTATION; SALMONELLA TYPHIMURIUM; VITAMIN B 12;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; PSEUDOMONAS; PSEUDOMONAS DENITRIFICANS; SALMONELLA TYPHIMURIUM; TYPHIMURIUM;

EID: 0030023661     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.178.3.753-767.1996     Document Type: Article

References (55)

1. Ailion, M., T. A. Bobik, and J. Roth. 1993. Two global regulatory systems (Crp and Arc) control the cobalamin/propanediol regulon of Salmonella typhimurium. J. Bacteriol. 173:7200-7208.
2. Allen, L. N., and R. S. Hanson. 1985. Construction of broad-host-range cosmid cloning vectors: identification of genes necessary for growth of Methylobacterium organophilum on methanol. J. Bacteriol. 161:955-962.
3. Andersson, D. I., and J. R. Roth. 1989. Mutations affecting regulation of cobinamide biosynthesis in Salmonella typhimurium. J. Bacteriol 171:6726-6733.
4. Baker, H., H. Franck, I. Pasher, H. Sobotka, H. A. Nathan, S. H. Hunter, and S. A. Aaronson. 1960 Elaboration of vitamin B12 by Escherichia coli. Experientia 16:187.
5. 12 biosynthesis. J Chem Soc. Perkin Trans. I 1:487-491.
6. 12, vol. 2. John Wiley & Sons, New York.
7. Bergmann, K.-H., R. Deeg, K. D. Gneuss, H.-P. Kriemler, and G. Muller. 1977. Gewinnung von Zwischenprodukten der Cobyrinsàure-Biosynthese mit Zellsuspensionen von Proptonibacterium shermanu, Hoppe-Seyler's Z. Physiol. Chem. 358:1315-1323.
8. 12: how the problem of its biosynthesis was solved. Angew. Chem. Int Ed. Engl. 34: 383-411.
9. 12 in Pseudomonas denitrificans, the biosynthetic sequence from precorrin-6y to precorrin-8x is catalyzed by the cobL gene product. J. Bacteriol. 174:1050-1052.
10. Blanche, F., L. Maton, L. Debussche, and D. Thibaut. 1992. Purification and characterization of cob(II)yrinic acid a,c-diamide reductase from Pseudomonas denitrificans. J Bacteriol. 174:7452-7454.
11. 12 biosynthesis. Angew. Chem Int Ed. Engl 32:1651-1653.
12. 12 synthesis and propanediol degradation. J. Bacteriol. 174:2253-2266.
13. Bonnett, R., J. M. Godfrey, and D. G. Redman. 1969 Cobyric acid and related compounds from vitamin B12. J Chem. Soc. Sect. C Org. Chem. 1969:1163-1166.
14. Brosius, J., and A. Holy. 1984. Regulation of ribosomal RNA promoters with a synthetic lac operator Proc. Natl. Acad. Sci USA 81:6929-6933.
15. 12 biosynthesis in Pseudomonas denitrificans J Bacteriol. 171:547-557.
16. Chang, A. C. Y., and S. N. Cohen. 1978. Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J Bacteriol. 134:1141-1156
17. 12, dimethylbenzimidazole. J. Bacteriol. 177:1461-1469
18. Collins, C, D. Gutman, and J. Isaza. 1993. EMBL database, reference no. L25054. European Molecular Biology Laboratory, Heidelberg, Germany
19. Crouzet, J., B. Cameron, L. Cauchois, S. Rigault, M.-C. Rouyez, F. Blanche, D. Thibaut, and L. Debussche. 1990. Genetic and sequence analysis of an 8.7-kilobase Pseudomonas denitrificans fragment carrying eight genes involved in transformation of precorrin-2 to cobyrinic acid J. Bacteriol. 172: 5980-5990
20. Crouzet, J., L. Cauchois, F. Blanche, L. Debussche, D. Thibaut, M.-C. Rouyez, S. Rigault, J.-F. Mayaux, and B. Cameron. 1990. Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA fragment containing five cob genes and identification of structural genes encoding S-adenosyl-L-methionine, uroporphyrinogen III methyltransferase and cobyrinic acid a,c-diamide synthase. J. Bacteriol 172:5968-5979.
21. Crouzet, J., S. Levy-Schil, B. Cameron, L. Cauchois, S. Rigault. M.-C. Rouyez, F. Blanche, L. Debussche, and D. Thibaut. 1991 Nucleotide sequence and genetic analysis of a 13.1-kilobase-pair Pseudomonas denitrificans DNA fragment containing five cob genes and identification of structural genes encoding cob(I)alamin adenosyltransferase, cobyric acid synthase, and bifunctional cobinamide kinase-cobinamide phosphate guanylyltransferase. J. Bacteriol. 173:6074-6087
22. 12 biosynthesis in Pseudomonas denitrificans. J. Bacteriol 174:7445-7451.
23. 12 in Pseudomonas denitrificans J Bacteriol. 175:7430-7440.
24. Dellweg, H., E. Becher, and K. Bernhauer. 1956. Über die biosynthetische Verwerbarkeit von Benzimidazolcarbonsauren und verwandten Verbindungen. Biochem. Z. 328:88.
25. 12-binding domains of methionine synthase. Science 266:1669-1674
26. 12: experiments concerning the origin of its molecular structure. Angew. Chem. Int. Ed. Engl. 27:5-39.
27. 12-like compounds Biochem. J. 59:86
28. Gilbert, W. 1986. The RNA world. Nature (London) 319:618.
29. 12) de novo under anaerobic growth conditions J. Bacteriol. 159:206-213.
30. Kirke, P. N., A. M. Mooly, L. E. Daly, H. Burke, D. G. Weir, and J. M. Scott. 1993 Maternal plasma folate and vitamin B12 are independent risk factors for neural tube defects. QJM 86:703-707.
31. Kisliuk, R. L., and D. D. Woods. 1960. Interrelationships between folic acid and cobalamin in the synthesis of methionine by extracts of Escherichia coli. Biochem. J 75:467-477.
32. Macdonald, H., and V. J. Cole. 1985. Molecular cloning and functional analysis of cysG and NirB genes of E. coli K12, two closely linked genes required for NADH-dependent reductase activity. Mol. Gen. Genet 200: 328-334.
33. 12. Walter de Gruyter, Berlin
34. Muller, G., K. Hlineny, E. Savvidis, F. Zipfel, J. Schiedl, and E. Schneider. 1990 On the methylation process and cobalt insertion in cobynnic acid biosynthesis, p 281-298 In T O Baldwin (ed), Chemical aspects of enzyme biotechnology. Plenum Press, New York
35. 12 biosynthesis J. Am. Chem. Soc. 113:9893-9895.
36. O'Farrell, P. 1975. High resolution of 2-dimension electrophoresis of proteins. J. Biol. Chem. 250:4007-4021.
37. O'Farrell, P. 1977 High resolution of 2-dimension electrophoresis of basic as well as acidic proteins. Cell 12:1133-1142.
38. O'Toole, G. A., and J. C. Escalante-Semerena. 1993. cobU-dependent assimilation of nonadenosylated cobinamide in cobA mutants of Salmonella typhimurium. J Bacteriol 175:6328-6336.
39. O'Toole, G. A., M. R. Rondon, and J. C. Escalante-Semerena. 1993. Analysis of mutants of Salmonella typhimurium defective in the nucleotide loop of cobalamin J. Bacteriol. 175:3317-3326.
40. Palva, E. T., and P. Liljestrom. 1981. Cosmid cloning and transposon mutagenesis in Salmonella typhimurium using phage λ vehicles. Mol Gen. Genet. 181:153-157.
41. 12) repression of the Cob operon in Salmonella typhimurium requires sequences within the leader and the first translated open reading frame J. Mol. Biol 6: 743-749.
42. Roessner, C. A., M. J. Warren, P. J. Santander, B. A. Atshaves, S. I. Ozaki, N. J. Stolowich, K. Iada, and A. I. Scott. 1992. Expression of 9 Salmonella typhimurium enzymes for cobinamide synthesis. FEBS Lett. 301:73-78
43. Rondon, M. R., and J. C. Escalante-Semerena. 1992. The poc locus is required for 1,2-propanediol-dependent transcription of the cobalamin biosynthetic (cob) and propanediol utilization (pdu) genes of Salmonella typhimurium. J. Bacteriol. 174:2267-2272.
44. 12) biosynthetic genes of Salmonella typhimurium. J. Bacteriol. 175:3303-3316.
45. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
46. Sanger, F., S. Nicklen, and A. R. Coulson. 1977 DNA sequencing with chain-terminating inhibitors Proc. Natl. Acad. Sci. USA 74:5463-5467
47. 12. Walter de Gruyter, Berlin.
48. 12 biosynthesis. Heterocycles 39:471-476.
49. Scott, A. I., C. A. Roessner, N. J. Stolowich, J. B. Spencer, C. Min, and S. I. Ozaki. 1993. Biosynthesis of vitamin B12. Discovery of the enzymes for oxidative ring contraction and insertion of the fourth methyl group FEBS Lett 331:105-108.
50. 12. Walter de Gruyter, Berlin.
51. 1-(5-phospho-α-D-ribosyl)-5,6-dimethylbenzimidazole, an intermediate in the synthesis of the nucleotide loop of cobalamin. J. Bacteriol. 176:3568-3575.
52. Warren, M. J., E. L. Bolt, C. A. Roessner, A. I. Scott, J. B. Spencer, and S, C. Woodcock. 1994. Gene dissection demonstrates that the Escherichia coli cysG gene encodes a multifunctional protein. Biochem. J. 302:837-844.
53. 12. Biochemistry 31:603-609.
54. Warren, M. J., C. A. Roessner, P. J. Santander, and A. I. Scott. 1990. The Escherichia coli cysG gene encodes S-adenosylmethionine-dependent uroporphyrinogen III methylase. Bioehem. J 265:725-729.
55. White, H. B., III. 1976. Coenzymes as fossils of an earlier metabolic state. J. Mol. Evol. 7:101.