Spiroplasma citri virus SpV1: Characterization of viral sequences present in the spiroplasmal host chromosome

Current Microbiology

Volumn 32, Issue 3, 1996, Pages 134-140

  Bébéar, Cécile Marie ^a   Aullo, Patricia ^a   Bové, Joseph Marie ^a   Renaudin, Joël ^a  

^a UNIVERSITÉ DE BORDEAUX   (France)

Author keywords

[No Author keywords available]

Indexed keywords

REPETITIVE DNA; TRANSPOSASE; VIRUS DNA;

ARTICLE; DNA LIBRARY; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; SOUTHERN BLOTTING; SPIROPLASMA; VIRUS; VIRUS GENOME;

EID: 0030020694     PISSN: 03438651     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002849900024     Document Type: Article

References (30)

1. Altshul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
2. Bhugra B, Dybvig K (1993) Identification and characterization of IS1138, a transposable element from Mycoplasma pulmonis that belongs to the IS3 family. Mol Microbiol 7:577-584
3. Bové JM, Saillard C (1979) Cell biology of spiroplasmas. In: Whitcomb RF, Tully JG (eds) The mycoplasmas, vol. III. New York: Academic Press, pp 83-153
4. Dickinson MJ, Townsend R (1984) Characterization of the genome of a rod-shaped virus infecting Spiroplasma citri. J Gen Virol 65:1607-1610
5. Dong Q, Sadouk A, Van Der Lelie D, Taghavi S, Ferhat A, Nuyten JM, Borremans B, Mergeay M, Toussaint A (1992) Cloning and sequencing of IS1086, an Alcaligenes eutrophus insertion element related to IS30 and IS4351. J Bacteriol 174:8133-8138
6. Feinberg AP, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6-13
7. Ferrel RV, Heidari MB, Wise KS, McIntosh MA (1989) A mycoplasma genetic element resembling prokaryotic insertion sequences. Mol Microbiol 3:957-967
8. Fritensky B, Lis J, Wu R (1982) Portable microcomputer software for nucleotide sequence analysis. Nucleic Acids Res 10:6451-6463
9. Galas DJ, Chandler M (1989) Bacterial insertion sequences. In: Berg DE, Howe MM (eds) Mobile DNA. Washington, D.C.: Am Soc Microbiol, pp 109-162
10. Grindley NDF, Reed RR (1985) Transpositional recombination in prokaryotes. Annu Rev Biochem 54:863-896
11. Hu WS, Wang RYH, Liou RS, Shin JWK, Lo SC (1990) Identification of an insertion-sequence-like genetic element in the newly recognized human pathogen Mycoplasma incognitus. Gene 93:67-72
12. Liss A, Cole RM (1981) Spiroplasmavirus group I: Isolation, growth, and properties. Curr Miciobiol 5:357-362
13. March PE, Ahnn J, Inouye M (1985) The DNA sequence of the (mc) encoding ribonuclease III of Escherichia coli. Nucleic Acids Res 13:4677-4685
14. Renaudin J, Bové JM (1994) SpV1 and SpV4, spiroplasma viruses with circular, single-stranded DNA genomes, and their contribution to the molecular biology of spiroplasmas. Adv Virus Res 44:429-463
15. th Conf Int Org Citrus Virol, Riverside, pp 285-290
16. Renaudin J, Aullo P, Vignault JC, Bové JM (1990a) Complete nucleotide sequence of the genome of Spiroplasma citri virus SpV1-R8A2B. Nucleic Acids Res 18:1293-1294
17. Renaudin J, Bodin-Ramiro C, Vignault JC, Bové JM (1990b) Spiroplasmavirus 1: presence of viral DNA sequences in the spiroplasma genome. In: Stanek G, Cassell GH, Tully JG, Whitcomb RF (eds) Recent Advances in Mycoplasmology, Zentralbl Bakteriol, Suppl 20, Stuggart: Fischer Verlag, pp 125-130
18. Saglio P, Lhospital M, Laflèche D, Dupont G, Bové JM, Tully JG, Freundt EA (1973) Spiroplasma citri gen. and sp.n.: a mycoplasma-like organism associated with «stubborn» disease of citrus. Int J Syst Bacteriol 23:191-204
19. Sambrook J, Fritsch ET, Maniatis T (1989) Molecular cloning. A laboratory manual, 2nd ed, Vol 3, section A12. Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press
20. Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain termination inhibitors. Proc Natl Acad Sci USA 74:5463-5467
21. Stamburski C, Renaudin J, Bové JM (1990) First step toward a virus-derived vector for gene cloning and expression in spiroplasmas, organisms which read UGA as a tryptophan codon: synthesis of chloramphenicol acetyltransferase in Spiroplasma citri. J Bacteriol 173:2225-2230
22. Townsend R, Markham PG, Plaskitt KA, Daniels MJ (1977) Isolation and characterization of a non-helical strain of Spiroplasma citri. J Gen Microbiol 100:15-21
23. Weisburg WG, Tully JG, Rose DL, Petzel JP, Oyaizu H, Yang D, Mandelco L, Sechrest J, Lawrence TG, Van Etten J, Maniloff J, Woese CR (1989) A phylogenetic analysis of the mycoplasmas: basis for their classification. J Bacteriol 171:6455-6467
24. Whitcomb RF (1983) Culture media for spiroplasmas. Methods Mycoplasmol 1:147-169
25. Wilbur WJ, Lipman DJ (1983) Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci USA 80:726-730
26. Williamson DL, Renaudin J, Bové J (1991) Nucleotide sequence of the Spimplasma citri fibril protein gene. J Bacteriol 173:4353-4362
27. Woese CR (1987) Bacterial evolution. Microbiol Rev 51:221-271
28. Won OH, Larson TJ (1992) Physical locations of genes in the rne (ams)-rpmF-plsX-fab region of the Escherichia coli K-12 chromosome. J Bacteriol 174:7873-7874
29. Ye F, Laigret F, Whitley JC, Citti C, Finch LR, Carle P, Renaudin J, Bové JM (1992) A physical and genetic map of the Spiroplasma citri genome. Nucleic Acids Res 20:1559-1565
30. Ye F, Laigret F, Bové JM (1994) A physical and genomic map of the prokaryote Spiroplasma melliferum and its comparison with the Spiroplasma citri map. CR Acad Sci III 317:392-398