Sequence variation in the putative replication origins of the five genetically distinct basic Euoenothera plastid chromosomes (plastomes)

Molecular and General Genetics

Volumn 251, Issue 5, 1996, Pages 609-612

  Hornung, Stefanie ^a   Fulgosi, Hrvoje ^a   Dörfel, Peter ^a   Herrmann, Reinhold G ^a  

^a UNIVERSITY OF MUNICH   (Germany)

Author keywords

Euoenothera; Nuclear plastid interactions; Plastome; Replication origins; Sequence analysis

Indexed keywords

RIBOSOME DNA; RNA 16S; RNA 23S;

ARTICLE; CHROMOSOME; DNA REPLICATION ORIGIN; NONHUMAN; OPERON; PEDIGREE; PHYLOGENY; PLANT; PLASTID; PRIORITY JOURNAL; PROTEIN SECONDARY STRUCTURE; SEQUENCE HOMOLOGY;

CHROMOSOMES; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANTS; PLASTIDS; REPLICATION ORIGIN; RNA, RIBOSOMAL, 16S; RNA, TRANSFER; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 0030016298     PISSN: 00268925     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004380050208     Document Type: Article

References (22)

1. Bohnert HJ, Driesel AJ, Crouse EJ, Gordon K, Herrmann RG, Steinmetz A, Mubumbila W, Keller M, Burkard G, Weil HJ (1979) Presence of transfer RNA genes in the spacer sequence between the 16S and 23S RNA genes of spinach chloroplast DNA. FEBS Lett 103:52-56
2. Chiu W-L, Sears BB (1992) Electron microscopic localization of replication origins in Oenothera chloroplast DNA. Mol Gen Genet 232:33-39
3. Chiu W-L, Sears BB (1993) Plastome-genome interactions affect plastid transmission in Oenothera. Genetics 133:989-997
4. Felsenstein J (1991) PHYLIP, phylogenetic inference package. University of Seattle, Washington
5. Gordon KHJ, Crouse EJ, Bohnert HJ, Herrmann RG (1982) Physical mapping of differences in chloroplast DNA of the five Euoenothera wild-type plastomes in Oenothera subsection Euoenothera. Theor Appl Genet 61:373-384
6. Heinhorst S, Cannon GC (1993) DNA replication in chloroplasts. J Cell Sci, 104:1-9
7. Herrmann RG (1977) Studies on Oenothera plastid DNAs. In: Schütte HR, Gross D (eds) Regulation of developmental processes in plants. VEB Fischer, Jena, p 48
8. Herrmann RG (1996) Photosynthesis research aspects and perspectives. In: Andersson B, Salter AH, Barber J (eds) Frontiers in molecular biology: molecular genetics in photosynthesis. Oxford University Press, pp 1-44
9. Herrmann RG, Possingham JV (1980) Plastid DNA - the plastome. In: Reinert J (ed) Results and problems in cell differentiation, vol. 10. (Chloroplasts). Springer, Berlin-Heidelberg-New York, pp 45-96
10. Herrmann RG, Seyer P, Schedel R, Gordon K, Bisanz C, Winter P, Hildebrandt JW, Wlaschek M, Alt J, Driesel AJ, Sears BB (1980) The plastid chromosomes of several dicotyledons. In: Bücher T, Sebald W, Weiss H (eds) Biological chemistry of organelle formation. Springer. Berlin-Heidelberg-New York pp 97-112
11. Koch W, Edwards K, Kössel H (1981) Sequencing of the 16S-23S spacer in a ribosomal RNA operon of Zea mays chloroplast DNA reveals two split tRNA genes. Cell 25:203-213
12. Kornberg A (1982) Supplement of DNA Replication. Freeman WH, San Francisco, pp 145-152
13. Renner O (1934) Die pflanzlichen Plastiden als selbständige Elemente der genetischen Konstitution. Ber Verh Sachs Akad Wiss Leipzig Math-Phys K1 86:214-266
14. Sanger F, Nicklen S, Coulson AR (1977) sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463-5467
15. Schötz F (1975) Untersuchungen über die Plastidenkonkurrenz bei Oenothera. V. Die Stabilität der Konkurrenzfähigkeit bei Verwendung verschiedenartiger mutierter Testplastiden. Biol Zentralblatt 94:17-26
16. Shinozaki K, Ohme M, Tanaka T, Wakasugi T, Hayashida N, Matsbayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, Ohto C, Torazawa K, Meng BY, Sugita M, Deno H, Kamogashira T, Yamada K, Kusuda J, Takaiwa F, Kato A, Tohdoh N, Shimada H, Sugiura M (1986) The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. EMBO J 5:2043-2049
17. Stubbe W (1959) Genetische Analyse des Zusammenwirkens von Genom und Plastom bei Oenothera. Z Vererbungslehre 90:288-298
18. Stubbe W (1989) Oenothera an ideal system for studying the interactions of genome and plastome. Plant Mol Biol Rep 7:245-257
19. Stubbe W, Herrmann RG (1982) Selection and maintenance of plastome mutants and interspecific genome plastome hybrids from Oenothera. In: Edelman M, Hallick R, Chua N-H (eds) Methods of chloroplast molecular biology. Elsevier North Holland Press, Amsterdam, pp 149-165
20. Tinoco I Jr, Borer PN, Dangler B, Levine MD, Uhlenbeck OC, Crothers DM, Gralla J (1973) Improved estimation of secondary structure in ribonucleic acids. Nature New Biol 246:40-41
21. Winter P, Herrmann RG (1987) A five-base-pair-deletion in the gene for the large subunit causes the lesion in the ribulose bisphosphate carboxylase/oxygenase-deficient plastome mutant sigma of Oenothera hookeri. Botan Acta 101:42-48
22. Wolfson R, Higgins KG, Sears BB (1991) Evidence for replication slippage in the evolution of Oenothera chloroplast DNA. Mol Biol Evol 8:709-720