An algorithm for finding maximal common subtopologies in a set of protein structures

Journal of Computational Biology

Volumn 3, Issue 2, 1996, Pages 289-306

  Koch, Ina ^a  

^a FRAUNHOFER INSTITUTE FOR ALGORITHMS AND SCIENTIFIC COMPUTING SCAI   (Germany)

Author keywords

graph algorithm; maximal common substructure; maximum common subgraph; multiple structure alignment; secondary structure topology; structural similarity

Indexed keywords

CYTOCHROME; ENOLASE; FRUCTOSE BISPHOSPHATE ALDOLASE; LACTATE DEHYDROGENASE (CYTOCHROME); TRIOSEPHOSPHATE ISOMERASE;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPARATIVE STUDY; HYDROGEN BOND; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN SECONDARY STRUCTURE;

EID: 0030016158     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/cmb.1996.3.289     Document Type: Article

References (1)

1. Artymiuk, P.J., Rice, D.W., Mitchell, E.M., and Willeit, P. 1990. Structural resemblance between the families of bacterial signal-transduction proteins and of G proteins revealed by graph theoretical techniques. Protein Eng. 4, 39-43.