Automated feature extraction for the classification of human in vivo 13C NMR spectra using statistical pattern recognition and wavelets

Magnetic Resonance in Medicine

Volumn 35, Issue 6, 1996, Pages 834-840

  Tate, A Rosemary ^a   Watson, Des ^a   Eglen, Stephen ^a   Arvanitis, Theodoros N ^a   Thomas, E Louise ^b   Bell, Jimmy D ^b  

^a UNIVERSITY OF SUSSEX   (United Kingdom)

^b HAMMERSMITH HOSPITAL   (United Kingdom)

Author keywords

Discriminant analysis; Magnetic resonance spectroscopy; Principal component analysis; Wavelets

Indexed keywords

DISCRIMINANT ANALYSIS; MAGNETIC RESONANCE SPECTROSCOPY; MEDICINE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PATTERN RECOGNITION; PRINCIPAL COMPONENT ANALYSIS; WAVELET ANALYSIS;

AUTOMATED FEATURE EXTRACTION; EXTRACTING FEATURES; HUMAN ADIPOSE TISSUE; LARGE AMOUNTS OF DATA; LINEAR DISCRIMINANT FUNCTIONS; MAGNETIC RESONANCE SPECTROSCOPIES (MRS); STATISTICAL PATTERN RECOGNITION; WAVELETS;

NUCLEAR MAGNETIC RESONANCE;

ARTICLE; AUTOMATION; CARBON NUCLEAR MAGNETIC RESONANCE; CLASSIFICATION; DATA ANALYSIS; DISCRIMINANT ANALYSIS; HUMAN; NORMAL HUMAN;

EID: 0030015047     PISSN: 07403194     EISSN: None     Source Type: Journal    
DOI: 10.1002/mrm.1910350608     Document Type: Article

References (19)

1. K. P. R. Gartland, C. R. Beddell, J. C. Lindon, J. K. Nicholson, A pattern recognition approach to the comparison of PMR and clinical chemical data for classification of nephrotoxicity. J. Pharmaceut. Biomed. Anal. 8, 963-968 (1990).
2. F. Y. K. Ghauri, J. K. Nicholson, B. C. Sweatman, J. Wood, C. R. Beddell, J. C. Lindon, N. J. Cairns, NMR spectroscopy of human postmortem cerebrospinal fluid - distinction of Alzheimers disease from control using pattern recognition and statistics. NMH Biomed. 6, 163-167 (1993).
3. M. L. Anthony, B. C. Sweatman, C. R. Beddell, J. C. Lindon, J. K. Nicholson, Pattern recognition classification of the site of nephrotoxicity based on metabolic data derived from proton nuclear magnetic resonance spectra of urine. Molec. Pharmacol. 46, 199-211 (1994).
4. G. Hagberg, A. P. Burlina, I. Mader, W. Roser, E. W. Radue, J. Seelig, In vivo proton MR spectroscopy of human gliomas: definition of metabolic coordinates for multi-dimensional classification. Magn. Reson. Med. 34, 242-252 (1995).
5. S. Confort-Gouny, J. Vion-Dury, F. Nicoli, P. Dano, J.-L. Gastaut, P. J. Cozzone, Metabolic characterization of neurological diseases by proton localized NMR spectroscopy of the human brain. Compt. Rend. L'Acad. Sci. Serie III - Sci. Vie. 315, 287-293 (1992).
6. M. C. Preul, Z. Caramanos, D. L. Collins, J-G. Villemure, W. Feindel, D. L. Arnold, Linear discriminant analysis based on proton MR spectroscopic imaging of human brain tumours improves pre-operative diagnosis, in "Proc., SMR, 2nd Annual Meeting, 1994," p. 125.
7. 1H nuclear magnetic resonance spectra by the application of chemometric techniques. Magn. Reson. Med. 28, 214-236 (1992).
8. 1H NMR spectra by pattern recognition. NMR Biomed. 5, 59-64 (1992).
9. 31P magnetic resonance spectroscopy tumour spectra obtained in vivo. NMH Biomed. 6, 237-241 (1993).
10. 1H spectra of thyroid neoplasms. Magn. Reson. Med. 33, 257-263 (1995).
11. 13C MR spectroscopy study to investigate the relationship between diet and adipose tissue composition. Lipids (in press).
12. M. Bos, J. A. M. Vrielink, The wavelet transform for preprocessing IR-spectra in the identification of monosubstituted and disubstituted benzenes. Chemometr. Intell. Lab. Sys. 23, 115-122, (1994).
13. I. Daubechies, "Ten Lectures on Wavelets," CBMS Regional Conference Series in Applied Mathematics, 1992.
14. G. Kaiser, "A Friendly Guide to Wavelets," Birkhauser, Boston, 1994.
15. William H. Press, Saul A. Teukolsky, William T. Vetterling, Brian P. Flannery, "Numerical Recipes in C: the Art of Scientific Computing," (2nd ed.), Cambridge University Press, Cambridge, 1992.
16. SPSS Inc., "SPSSX User's Guide," (3rd ed.), SPSS Inc., Chicago, 1987.
17. D. L. Massart, B. G. M. Vandeginste, S. N. Deming, Y. Michotte, L. Kaufman, "Chemometrics: a Textbook," Elsevier Science Publishers, New York, 1988.
18. B. S. Everitt, G. Dunn, "Applied Multivariate Data Analysis." Edward Arnold, 1991.
19. A. R. Tate, S. Crabb, J. R. Griffiths, S. L. Howells, R. A. Mazucco, L. M. Rodrigues, D. Watson, Lipid metabolite peaks in pattern recognition analysis of tumour in vivo MR spectra. Anticancer Res. 16(3), 1-5 (1996).