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Volumn 62, Issue 7, 1996, Pages 2621-2628

Detection and characterization of broad-host-range plasmids in environmental bacteria by PCR

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

EID: 0030014510     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.7.2621-2628.1996     Document Type: Article
Times cited : (217)

References (44)
  • 1
    • 0024115419 scopus 로고    scopus 로고
    • Novel method for studying plasmid transfer in undisturbed river epilithon
    • Bale, M. J., M. J. Day, and J. C. Fry. 1998. Novel method for studying plasmid transfer in undisturbed river epilithon. Appl. Environ. Microbiol. 54:2756-2758.
    • (1998) Appl. Environ. Microbiol. , vol.54 , pp. 2756-2758
    • Bale, M.J.1    Day, M.J.2    Fry, J.C.3
  • 3
    • 0023359018 scopus 로고
    • The origin of transfer (oriT) of the conjugative plasmid R46: Characterization by deletion analysis and DNA sequencing
    • Coupland, G. M., A. M. C. Brown, and N. S. Willetts. 1987 The origin of transfer (oriT) of the conjugative plasmid R46: characterization by deletion analysis and DNA sequencing. Mol. Gen. Genet. 208:219-225.
    • (1987) Mol. Gen. Genet. , vol.208 , pp. 219-225
    • Coupland, G.M.1    Brown, A.M.C.2    Willetts, N.S.3
  • 4
    • 0023746577 scopus 로고
    • Identification and classification of bacterial plasmids
    • Couturier, M., F. Bex, P. L. Bergquist, and W. K. Maas. 1988. Identification and classification of bacterial plasmids. Microbiol. Rev. 52:375-395.
    • (1988) Microbiol. Rev. , vol.52 , pp. 375-395
    • Couturier, M.1    Bex, F.2    Bergquist, P.L.3    Maas, W.K.4
  • 5
    • 0029126298 scopus 로고
    • Abundance of Tn3, Tn21, and Tn501 transposase (tnpA) sequences in bacterial community DNA from marine environments
    • Dahlberg, C., and M. Hermansson. 1995. Abundance of Tn3, Tn21, and Tn501 transposase (tnpA) sequences in bacterial community DNA from marine environments. Appl. Environ. Microbiol. 61:3051-3056.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 3051-3056
    • Dahlberg, C.1    Hermansson, M.2
  • 6
    • 0023152856 scopus 로고
    • Mobilization of the nonconjugative plasmid RSF1010: A genetic and DNA sequence analysis of the mobilization region
    • Derbyshire, K. M., G. Hatfull, and N. Willetts. 1987. Mobilization of the nonconjugative plasmid RSF1010: a genetic and DNA sequence analysis of the mobilization region. Mol. Gen. Genet. 206:161-168.
    • (1987) Mol. Gen. Genet. , vol.206 , pp. 161-168
    • Derbyshire, K.M.1    Hatfull, G.2    Willetts, N.3
  • 7
    • 0019511050 scopus 로고
    • Properties of six pesticide degradation plasmids isolated from Alcaligenes paradoxus and Alcaligenes eutrophus
    • Don, R. H., and J. M. Pemberton. 1981. Properties of six pesticide degradation plasmids isolated from Alcaligenes paradoxus and Alcaligenes eutrophus. J. Bacteriol. 145:681-686.
    • (1981) J. Bacteriol. , vol.145 , pp. 681-686
    • Don, R.H.1    Pemberton, J.M.2
  • 8
    • 0000527904 scopus 로고
    • Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in Irans
    • Figurski, D. H., and D. R. Helinski. 1979. Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in Irans. Proc. Natl. Acad. Sci. USA 79:1935-1939.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 1935-1939
    • Figurski, D.H.1    Helinski, D.R.2
  • 9
    • 0026583752 scopus 로고
    • Copy number control of the broad host range plasmid RSF1010
    • Frey, J., M. M. Bagdasarian, and M. Bagdasarian. 1992. Copy number control of the broad host range plasmid RSF1010. Gene 113:101-106.
    • (1992) Gene , vol.113 , pp. 101-106
    • Frey, J.1    Bagdasarian, M.M.2    Bagdasarian, M.3
  • 10
    • 0002818346 scopus 로고
    • Broad host range conjugative and mobilizable plasmids in gram-negative bacteria
    • D. B. Clewell (ed.), Plenum Press, New York
    • Guiney, D. G. 1993. Broad host range conjugative and mobilizable plasmids in gram-negative bacteria, p. 75-103. In D. B. Clewell (ed.), Bacterial conjugation. Plenum Press, New York.
    • (1993) Bacterial Conjugation , pp. 75-103
    • Guiney, D.G.1
  • 11
    • 0002085277 scopus 로고
    • Replication proteins of the IncQ plasmid RSF1010
    • C. M. Thomas (ed.), Academic Press, London
    • Haring, V., and E. Scherzinger. 1989. Replication proteins of the IncQ plasmid RSF1010, p. 95-124. In C. M. Thomas (ed.), Promiscuous plasmids of gram-negative bacteria. Academic Press, London.
    • (1989) Promiscuous Plasmids of Gram-negative Bacteria , pp. 95-124
    • Haring, V.1    Scherzinger, E.2
  • 14
    • 0028844048 scopus 로고
    • Purification of KorA protein from broad host range plasmid RK2: Definition of a hierarchy of KorA operators
    • Jagura-Burdzy, G., and C. M. Thomas. 1995. Purification of KorA protein from broad host range plasmid RK2: definition of a hierarchy of KorA operators. J. Mol. Biol. 253:39-50.
    • (1995) J. Mol. Biol. , vol.253 , pp. 39-50
    • Jagura-Burdzy, G.1    Thomas, C.M.2
  • 15
    • 0028294465 scopus 로고
    • Host-inhibitory functions encoded by promiscuous plasmids. Transient arrest of Escherichia coli segregants that fail to inherit plasmid RK2
    • Jovanovic, O. S., E. K. Ayres, and D. H. Figurski. 1994 Host-inhibitory functions encoded by promiscuous plasmids. Transient arrest of Escherichia coli segregants that fail to inherit plasmid RK2. J. Mol. Biol. 237:52-64.
    • (1994) J. Mol. Biol. , vol.237 , pp. 52-64
    • Jovanovic, O.S.1    Ayres, E.K.2    Figurski, D.H.3
  • 16
    • 0025082893 scopus 로고
    • Mutations within the replicon of the IncN plasmid pCU1 that affect its Escherichia coli polA-independence hut not its autonomous replication ability
    • Krishnan, B. R., P. R. Fobert, U. Seitzer, and V. N. Iyer. 1990. Mutations within the replicon of the IncN plasmid pCU1 that affect its Escherichia coli polA-independence hut not its autonomous replication ability. Gene 91:1-7.
    • (1990) Gene , vol.91 , pp. 1-7
    • Krishnan, B.R.1    Fobert, P.R.2    Seitzer, U.3    Iyer, V.N.4
  • 17
    • 0029007928 scopus 로고
    • DNA processing and replication during bacterial conjugation
    • Lanka, E., and B. M. Wilkins. 1995. DNA processing and replication during bacterial conjugation. Annu. Rev. Biochem. 64:141-169.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 141-169
    • Lanka, E.1    Wilkins, B.M.2
  • 18
    • 0026730667 scopus 로고
    • Sequence similarities between the RP4 Tra2 and the Ti VirB region strongly support the conjugation model for T-DNA-transfer
    • Lessl, M., D. Balzer, W. Pansegrau, and E. Lanka. 1992. Sequence similarities between the RP4 Tra2 and the Ti VirB region strongly support the conjugation model for T-DNA-transfer. J. Biol. Chem. 267:20471-20480.
    • (1992) J. Biol. Chem. , vol.267 , pp. 20471-20480
    • Lessl, M.1    Balzer, D.2    Pansegrau, W.3    Lanka, E.4
  • 19
    • 0027482476 scopus 로고
    • The mating pair formation system of plasmid RP4 defined by RSF1010 mobilization and donor-specific phage propagation
    • Lessl, M., D. Balzer, K. Weyrauch, and E. Lanka. 1993. The mating pair formation system of plasmid RP4 defined by RSF1010 mobilization and donor-specific phage propagation. J. Bacteriol. 175:6415-6425.
    • (1993) J. Bacteriol. , vol.175 , pp. 6415-6425
    • Lessl, M.1    Balzer, D.2    Weyrauch, K.3    Lanka, E.4
  • 20
    • 0025811732 scopus 로고
    • Structural and functional analysis of the origin of conjugal transfer of the broad-host-range IncW plasmid R388 and comparison with the related IncN plasmid R46
    • Llosa, M., S. Bolland, and F. de la Cruz. 1991. Structural and functional analysis of the origin of conjugal transfer of the broad-host-range IncW plasmid R388 and comparison with the related IncN plasmid R46. Mol. Gen. Genet. 226:473-483.
    • (1991) Mol. Gen. Genet. , vol.226 , pp. 473-483
    • Llosa, M.1    Bolland, S.2    De La Cruz, F.3
  • 21
    • 0028047404 scopus 로고
    • Genetic organization of the conjugal DNA processing region of the IncW plasmid R388
    • Llosa, M., S. Bolland, and F. de la Cruz. 1994. Genetic organization of the conjugal DNA processing region of the IncW plasmid R388. J. Mol. Biol. 235:448-464.
    • (1994) J. Mol. Biol. , vol.235 , pp. 448-464
    • Llosa, M.1    Bolland, S.2    De La Cruz, F.3
  • 23
    • 0026465086 scopus 로고
    • The region essential for efficient autonomous replication of pSa in Escherichia coli
    • Okumura, M. S., and C. I. Kado. 1992. The region essential for efficient autonomous replication of pSa in Escherichia coli. Mol. Gen. Genet. 208: 55-63.
    • (1992) Mol. Gen. Genet. , vol.208 , pp. 55-63
    • Okumura, M.S.1    Kado, C.I.2
  • 25
    • 0028230286 scopus 로고
    • The parDE operon of the broad-host-range plasmid RK2 specifies growth inhibition associated with plasmid loss
    • Roberts, R. C., A. R. Ström, and D. R. Helinski. 1994. The parDE operon of the broad-host-range plasmid RK2 specifies growth inhibition associated with plasmid loss. J. Mol. Biol. 237:35-51.
    • (1994) J. Mol. Biol. , vol.237 , pp. 35-51
    • Roberts, R.C.1    Ström, A.R.2    Helinski, D.R.3
  • 27
    • 0026080434 scopus 로고
    • Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins
    • Scherzinger, E., V. Haring, R. Lurz, and S. Otto. 1991. Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins. Nucleic Acids Res. 19:1203-1211.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1203-1211
    • Scherzinger, E.1    Haring, V.2    Lurz, R.3    Otto, S.4
  • 28
    • 0024544412 scopus 로고
    • Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010
    • Scholz, P., V. Haring, B. Wittmann-Lieboid, K. Ashman, M. Bagdasarian, and E. Scherzinger. 1989. Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. Gene 75:271-288.
    • (1989) Gene , vol.75 , pp. 271-288
    • Scholz, P.1    Haring, V.2    Wittmann-Lieboid, B.3    Ashman, K.4    Bagdasarian, M.5    Scherzinger, E.6
  • 29
    • 0002497474 scopus 로고
    • Extraction of microbial DNA from sewage and manure slurries
    • A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Smalla, K. 1995. Extraction of microbial DNA from sewage and manure slurries, p. 1.1.3/1-1.1.3/10. In A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Molecular microbial ecology manual. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1995) Molecular Microbial Ecology Manual , pp. 1131-11310
    • Smalla, K.1
  • 31
    • 0021690245 scopus 로고
    • Nucleotide sequence of the trfA gene of broad host range plasmid RK2
    • Smith, C. A., and C. M. Thomas. 1984. Nucleotide sequence of the trfA gene of broad host range plasmid RK2. J. Mol. Biol. 175:251-262.
    • (1984) J. Mol. Biol. , vol.175 , pp. 251-262
    • Smith, C.A.1    Thomas, C.M.2
  • 32
    • 0027457239 scopus 로고
    • Ecological and genetic analysis of copper and streptomycin resistance in Pseudomonas syringae pv. syringae
    • Sundin, G. W., and C. L. Bender. 1993. Ecological and genetic analysis of copper and streptomycin resistance in Pseudomonas syringae pv. syringae. Appl. Environ. Microbiol. 59:1018-1024.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 1018-1024
    • Sundin, G.W.1    Bender, C.L.2
  • 33
    • 0027994760 scopus 로고
    • Genetic and plasmid diversity within natural populations of Pseudomonas syringae with various exposures to copper and streptomycin bactericides
    • Sundin, G. W., D. H. Demezas, and C. L. Bender. 1994. Genetic and plasmid diversity within natural populations of Pseudomonas syringae with various exposures to copper and streptomycin bactericides. Appl. Environ. Microbiol. 60:4421-4431.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 4421-4431
    • Sundin, G.W.1    Demezas, D.H.2    Bender, C.L.3
  • 34
    • 0028014450 scopus 로고
    • PCR probes for promiscuous plasmids
    • Thomas, C. M., and P. Thorsted. 1994. PCR probes for promiscuous plasmids. Microbiology 140:1.
    • (1994) Microbiology , vol.140 , pp. 1
    • Thomas, C.M.1    Thorsted, P.2
  • 35
    • 0029020201 scopus 로고
    • Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation
    • Top, E. M., W. E. Holben, and L. J. Forney. 1995. Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation. Appl. Environ. Microbiol. 61:1691-1698.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 1691-1698
    • Top, E.M.1    Holben, W.E.2    Forney, L.J.3
  • 36
    • 0028089977 scopus 로고
    • The spread of plasmids as a function of bacterial adaptability
    • Tschäpe, H. 1994. The spread of plasmids as a function of bacterial adaptability. FEMS Microbiol. Ecol. 15:23-32.
    • (1994) FEMS Microbiol. Ecol. , vol.15 , pp. 23-32
    • Tschäpe, H.1
  • 37
    • 0020671218 scopus 로고
    • Characterization of conjugative plasmids belonging to a new incompatibility group (IncZ)
    • Tschäpe, H., and E. Tietze. 1983. Characterization of conjugative plasmids belonging to a new incompatibility group (IncZ). Z. Allg. Mikrobiol. 23(6): 393-401.
    • (1983) Z. Allg. Mikrobiol. , vol.23 , Issue.6 , pp. 393-401
    • Tschäpe, H.1    Tietze, E.2
  • 38
    • 0019832105 scopus 로고
    • Characterization of conjugative R plasmids belonging to the new incompatibility group IncU
    • Tschäpe, H., E. Tietze, and C. Koch. 1981. Characterization of conjugative R plasmids belonging to the new incompatibility group IncU. J. Gen. Microbiol. 127:155-160.
    • (1981) J. Gen. Microbiol. , vol.127 , pp. 155-160
    • Tschäpe, H.1    Tietze, E.2    Koch, C.3
  • 39
    • 8944220440 scopus 로고    scopus 로고
    • Personal communication
    • van der Lelie, D. Personal communication.
    • Van Der Lelie, D.1
  • 40
    • 0002497474 scopus 로고
    • Extraction of microbial community DNA from soils
    • A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Van Elsas, J. D., and K. Smalla. 1995. Extraction of microbial community DNA from soils, p. 1.3.3/1-1.3.3/11. In A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Molecular microbial ecology manual. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1995) Molecular Microbial Ecology Manual , pp. 1331-13311
    • Van Elsas, J.D.1    Smalla, K.2
  • 41
    • 0029174669 scopus 로고
    • Bacterial dichloropropene degradation in soil; screening of soils and involvement of plasmids carrying the dhlA gene
    • Verhagen, C., E. Smit, D. B. Janssen, and J. D. van Elsas. 1995. Bacterial dichloropropene degradation in soil; screening of soils and involvement of plasmids carrying the dhlA gene. Soil Biol. Biochem. 27:1547-1557.
    • (1995) Soil Biol. Biochem. , vol.27 , pp. 1547-1557
    • Verhagen, C.1    Smit, E.2    Janssen, D.B.3    Van Elsas, J.D.4
  • 42
    • 0002412420 scopus 로고
    • DNA processing and replication during plasmid transfer between gram-negative bacteria
    • D. B. Clewell (ed.), Plenum Press, New York
    • Wilkins, B., and E. Lanka. 1993. DNA processing and replication during plasmid transfer between gram-negative bacteria, p. 105-136. In D. B. Clewell (ed.), Bacterial conjugation. Plenum Press, New York.
    • (1993) Bacterial Conjugation , pp. 105-136
    • Wilkins, B.1    Lanka, E.2
  • 43
    • 0028037220 scopus 로고
    • Regulation of transfer genes of promiscuous IncPα plasmid RK2: Repression of Tra1 region transcription both by relaxosome proteins and by the Tra2 regulator TrbA
    • Zatyka, M., G. Jagura-Burdzy, and C. M. Thomas. 1994. Regulation of transfer genes of promiscuous IncPα plasmid RK2: repression of Tra1 region transcription both by relaxosome proteins and by the Tra2 regulator TrbA. Microbiology 140:2981-2990.
    • (1994) Microbiology , vol.140 , pp. 2981-2990
    • Zatyka, M.1    Jagura-Burdzy, G.2    Thomas, C.M.3
  • 44
    • 0026294037 scopus 로고
    • Nucleotide sequence and organization of genes flanking the transfer origin of promiscuous plasmid RP4
    • Ziegelin, G., W. Pansegrau, B. Strack, D. Balzer, M. Kröger, V. Kruft, and E. Lanka. 1991. Nucleotide sequence and organization of genes flanking the transfer origin of promiscuous plasmid RP4. DNA Seq. 1:303-327.
    • (1991) DNA Seq. , vol.1 , pp. 303-327
    • Ziegelin, G.1    Pansegrau, W.2    Strack, B.3    Balzer, D.4    Kröger, M.5    Kruft, V.6    Lanka, E.7


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