Determinants of Drosophila fushi tarazu mRNA instability

Molecular and Cellular Biology

Volumn 16, Issue 6, 1996, Pages 3047-3053

  Riedl, Ann ^a,b   Jacobs Lorena, Marcelo ^a  

^a CASE WESTERN RESERVE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b BOSTON COLLEGE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DROSOPHILA; EMBRYO DEVELOPMENT; GENE EXPRESSION; HYBRID GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYADENYLATION; PRIORITY JOURNAL; RNA ANALYSIS; RNA STRUCTURE; TRANSGENIC ANIMAL;

ANIMALIA;

EID: 0030013328     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.16.6.3047     Document Type: Article

References (46)

1. Al-Atia, G. R., P. Fruscoloni, and M. Jacobs-Lorena. 1985. Translational regulation of mRNAs for ribosomal proteins during early Drosophila development. Biochemistry 24:5798-5803.
2. Alberta, J. A., K. Rundell, and C. D. Stiles. 1994. Identification of an activity that interacts with the 3′-untranslated region of c-myc mRNA and the role of its target sequence in mediating rapid mRNA degradation. J. Biol. Chem. 269:4532-4538.
3. Anderson, K. V., and J. A. Lengyel. 1979. Rates of synthesis of major classes of RNA in Drosophila embryos. Dev. Biol. 70:217-231.
4. Belasco, J. G., and G. Brawerman. 1993. Control of messenger RNA stability. Academic Press, San Diego, Calif.
5. Campos-Ortega, J. A., and V. Hartenstein. 1985. The embryonic development of Drosophila melanogaster. Springer-Verlag, New York.
6. Chen, C.-Y. A., T.-S. Chen, and A.-B. Shyu. 1994. Interplay of two functionally and structurally distinct domains of the c-fos AU-rich element specifies its mRNA-destabilizing function. Mol. Cell. Biol. 14:416-426.
7. Davis, I., and D. Ish-Horowicz. 1991. Apical localization of pair-rule transcripts requires 3′ sequences and limits protein diffusion in the Drosophila embryo. Cell 67:927-940.
8. Edgar, B. A., G. M. Odell, and G. Schubiger. 1987. Cytoarchitecture and the patterning of fushi tarazu expression in the Drosophila blastoderm. Genes Dev. 1:1226-1237.
9. Edgar, B. A., M. P. Weir, G. Schubiger, and T. Kornberg. 1986. Repression and turnover pattern fushi tarazu RNA in the early Drosophila embryo. Cell 47:747-754.
10. Ferrandon, D., L. Elphick, C. Nusslein-Volhard, and D. St. Johnston. 1994. Staufen protein associates with the 3′UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner. Cell 79:1221-1232.
11. Foe, V. E., and B. M. Alberts. 1983. Studies of nuclear and cytoplasmic behavior during the five mitotic cycles that precede gastrulation in Drosophila embryogenesis. J. Cell Sci. 61:31-70.
12. Fruscoloni, P., G. R. Al-Atia, and M. Jacobs-Lorena. 1983. Translational regulation of a specific gene during oogenesis and embryogenesis of Drosophila. Proc. Natl. Acad. Sci. USA 80:3359-3363.
13. Hafen, E., A. Kuroiwa, and W. J. Gehring. 1984. Spatial distribution of transcripts from the segmentation gene fushi tarazu during Drosophila embryonic development. Cell 37:833-841.
14. Haile, D. J., M. W. Hentze, T. A. Rouault, J. B. Harford, and R. D. Klausner. 1989, Regulation of interaction of the iron-responsive element binding protein with iron-responsive RNA elements. Mol. Cell. Biol. 9:5055-5061.
15. Heaton, B., C. Decker, D. Muhlrad, J. Donahue, A. Jacobson, and R. Parker. 1992. Analysis of chimeric mRNAs identifies two regions within the STE3 mRNA which promote rapid mRNA decay. Nucleic Acids Res. 20:5365-5373.
16. Herrick, D., and A. Jacobson. 1992. A segment of the coding region is necessary but not sufficient for rapid decay of the HIS3 mRNA in yeast. Genetics 114:35-41.
17. Hiromi, Y., A. Kuroiwa, and J. Gehring. 1985. Control elements of the Drosophila segmentation gene fushi tarazu. Cell 43:603-613.
18. Jaeger, J. A., D. H. Turner, and M. Zuker. 1989. Improved predictions of secondary structures for RNA. Proc. Natl. Acad. Sci. USA 86:7706-7710.
19. Jaeger, J. A., D. H. Turner, and M. Zuker. 1989. Predicting optimal and suboptimal secondary structure for RNA. Methods Enzymol. 183:281-306.
20. Jost, W., Y. Yu, L. Pick, A. Preiss, and D. Maier. 1995. Structure and regulation of the fushi tarazu gene from Drosophila hydei. Roux's Arch. Dev. Biol. 205:160-170.
21. Kay, M. A., and M. Jacobs-Lorena. 1985. Selective translational regulation of ribosomal protein gene expression during early development of Drosophila melanogaster. Mol. Cell. Biol. 35:3583-3592.
22. Kellerman, K. A., D. M. Mattson, and I. Duncan. 1990. Mutations affecting the stability of the fushi tarazu protein of Drosophila. Genes Dev. 4:1936-1950.
23. Kim-Ha, J., K. Kerr, and P. M. Macdonald. 1995. Translational regulation of oskar mRNA by Bruno, an ovarian RNA-binding protein, is essential. Cell 81:403-412.
24. Malter, J. S. 1989. Identification of an AUUUA-specific messenger RNA binding protein. Science 246:664-666.
25. McKnight, S. L., and O. L. Miller. 1976. Ultrastructural patterns of RNA synthesis during early embryogenesis of Drosophila melanogaster. Cell 8:305-319.
26. Patel, R. C., and M. Jacobs-Lorena. 1992. Cis-acting sequences in the 5′-untranslated region of the ribosomal protein Al mRNA mediate its translational regulation during early embryogenesis of Drosophila. J. Biol. Chem. 267:1159-1164.
27. Pirrotta, V. 1988. Vectors for P-mediated transformation in Drosophila, p. 437-456. In R. Rodriguez and D. Denhardt (ed.), Vectors: a survey of molecular cloning vectors and their uses. Butterworth, Boston.
28. Qian, S., J.-Y. Zhang, M. A. Kay, and M. Jacobs-Lorena. 1987. Structural analysis of the Drosophila rpA1 gene, a member of the eucaryotic 'A' type ribosomal protein family. Nucleic Acids Res. 15:987-1003.
29. Riedl, A., and M. Jacobs-Lorena. Unpublished data.
30. Riedl, A., X. Li, and M. Jacobs-Lorena. Unpublished data.
31. Rondon, I. J., L. A. MacMillan, B. S. Beckman, M. A. Goldberg, T. Schneider, H. F. Bunn, and J. S. Malter. 1991. Hypoxia up-regulates the activity of a novel erythropoietin mRNA binding protein. J. Biol. Chem. 266:16594-16598.
32. Rubin, G. M., and A. C. Spradling. 1982. Genetic transformation of Drosophila with transposable element vector. Science 218:348-353.
33. Shyu, A.-B., M. E. Greenberg, and J. G. Belasco. 1989. The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways. Genes Dev. 3:60-72.
34. Spicer, G. S. 1988. Molecular evolution among some Drosophila species groups as indicated by two-dimensional electrophoresis. J. Mol. Evol. 27:250-260.
35. Steller, H., and V. Pirrotta. 1986. P transposons controlled by the heat shock promoter. Mol. Cell. Biol. 6:1640-1649.
36. Surdej, P., A. Riedl, and M. Jacobs-Lorena. 1994. Regulation of mRNA stability in development. Annu. Rev. Genet. 28:263-282.
37. Weiner, A. J., M. P. Scott, and T. C. Kaufman. 1984. A molecular analysis of fushi tarazu, a gene in Drosophila melanogaster that encodes a product affecting embryonic segment number and cell fate. Cell 37:843-851.
38. Weir, M. P., and T. Kornberg. 1985. Patterns of engrailed and fushi tarazu transcripts reveal novel intermediate stages in Drosophila segmentation. Nature (London) 318:433-439.
39. Welte, M. A., I. Duncan, and S. Lindquist. 1995. The basis for a heat-induced developmental defect: defining crucial lesions. Genes Dev. 9:2240-2250.
40. Whittemore, L.-A., and T. Maniatis. 1990. Postinduction turnoff of beta-interferon gene expression. Mol. Cell. Biol. 10:1329-1337.
41. Williams, A. S., and W. F. Marzluff. 1995. The sequence of the stem and flanking sequences at the 3′ end of histone mRNA are critical determinants for the binding of the stem-loop binding protein. Nucleic Acids Res. 23:654-662.
42. Wisdom, R., and W. Lee. 1991. The protein-coding region of c-mvc mRNA contains a sequence that specifies rapid mRNA turnover and induction by protein synthesis inhibitors. Genes Dev. 5:232-243.
43. Wu, M., and M. Jacobs-Lorena. Unpublished data.
44. You, Y., C. A. Chen, and A. Shyu. 1992. U-rich sequence-binding proteins (URBPs) interacting with a 20-nucleotide U-rich sequence in the 3′ untranslated region of c-fos mRNA may be involved in the first step of c-fos mRNA degradation. Mol. Cell. Biol. 12:2931-2940.
45. Yu, Y., and L. Pick. 1995. Non-periodic cues generate seven ftz stripes in the Drosophila embryo. Mech. Dev. 50:163-175.
46. Zuker, M. 1989. On finding suboptimal foldings of an RNA molecule. Science 244:48-52.