Pigment-protein interactions in Rhodobacter sphaeroides Y photochemical reaction center; comparison with other reaction center structures

European Biophysics Journal

Volumn 24, Issue 4, 1996, Pages 233-242

  Arnoux, Bernadette ^a   Reiss Husson, Françoise ^b  

^a CNRS   (France)

^b CENTRE DE GÉNÉTIQUE MOLÉCULAIRE   (France)

Author keywords

bacterial reaction center; cofactor interactions; crystal structure; photosynthesis; structure comparison

Indexed keywords

PIGMENT; PROTEIN;

ARTICLE; CRYSTAL STRUCTURE; PHOTOCHEMISTRY; PHOTOSYNTHESIS; RHODOBACTER SPHAEROIDES;

BACTERIA (MICROORGANISMS); BLASTOCHLORIS VIRIDIS; RHODOBACTER; RHODOBACTER SPHAEROIDES; RHODOPSEUDOMONAS;

EID: 0030005175     PISSN: 01757571     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF00205104     Document Type: Article

References (31)

1. Allen JP, Feher G, Yeates TO, Rees DC, Deisenhofer J, Michel H, Huber R (1986) Structural homology of reaction centers from Rhodopseudomonas sphaeroides and Rhodopseudomonas viridis as determined by X-ray diffraction. Proc Natl Acad Sci USA 83: 8589-8593
2. Allen JP, Feher G, Yeates TO, Komiya H, Rees DC (1987) Structure of the reaction center from Rhodobacter sphaeriides R-26: the cofactors. Proc Natl Acad Sci USA 84: 5730-5734
3. 2+) interactions. Proc Natl Acad Sci USA 85: 8487-8491
4. Arnoux B, Ducruix A, Reiss-Husson F, Lutz M, Norris J, Schiffer M, Chang CH (1989) Structure of spheroidene in the photosynthetic reaction center from Y Rhodobacter sphaeroides. FEBS Letters 58: 47-50
5. Arnoux B, Ducruix A, Astier C, Picaud M, Roth M, Reiss-Husson F (1990) Towards the understanding of the function of Rb. phaeroides Y wild type reaction center: gene cloning, protein and detergent structures in the three dimensional crystals. Biochimie 72: 525-530
6. Arnoux B, Gaucher JF, Ducruix A, Reiss-Husson F (1995) Structure of the photochemical reaction center of a spheroidene-containing purple bacterium, Rhodobacter sphaeroides Y, at 3 Å resolution. Acta Crystallogr D51: 368-379
7. Buchanan SK, Fritzsch G, Ermler U, Michel H (1993) New crystal form of the photosynthetic reaction centre from Rhodobacter sphaeroides of improved diffraction quality. J Mol Biol 230: 1311-1314
8. Chang CH, Tiede D, Tang J, Smith U, Norris J, Schiffer M (1986) Structure of Rhodopseudomonas sphaeroides R-26 reaction center. FEBS Letters 205: 82-86
9. Chang CH, El-Kabbani O, Tiede D, Norris J, Schiffer M (1991) Structure of the membrane bound protein photosynthetic reaction center from Rhodobacter sphaeroides. Biochemistry 30: 5352-5360
10. Chirino AJ, Lous EJ, Huber M, Allen JP, Schenck CC, Paddock ML, Feher G, Rees D (1994) Crystallographic analyses of site-directed mutants of the photosynthetic reaction center from Rhodobacter sphaeroides. Biochemistry 33: 4584-4593
11. De Groot HJ, Gebhard R. Vanderhoef I, Hoff AJ, Lugtenburg J, Violette CA, Frank HA (1992) C-magic angle spinning NMR evidence for a 15.15′-cis configuration of the spheroidene in the Rhodobacter sphaeroides photosynthetic reaction center. Biochemistry 31: 12446-12450
12. Deisenhofer J, Michel H (1989) The photosynthetic reaction centre from the purple bacterium Rhodospeudomonas viridis. Embo J 8: 2149-2170
13. Deisenhofer J, Epp O, Miki K, Huber R, Michel H (1984) X ray structure analysis of a membrane protein complex. Electron density map at 3 A resolution and a model of the chromophores of the photosynthetic reaction center from Rhodopseudomonas viridis. J Mol Biol 180: 385-398
14. Deisenhofer J, Epp O, Miki K, Huber R, Michel H (1985) Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3 Å resolution. Nature 318: 618-624
15. Deisenhofer J, Epp O, Sinning I, Michel H (1995) Crystallographic refinement at 2.3 Å resolution and refined model of the photosynthetic reaction centre from Rhodopseudomonas viridis. J Mol Biol 246: 429-457
16. Ducruix A, Reiss-Husson F (1987) Preliminary characterization by X-ray diffraction of crystals of photochemical reaction centres from wild-type Rhodopseudomonas sphaeroides. J Mol Biol 193: 419-421
17. El-Kabbani O, Chang CH, Tiede D, Norris J, Schiffer M (1991) Comparison of reaction centers from Rhodobacter sphaeroides and Rhodopseudomonas viridis. Overall architecture and protein-pigment interactions. Biochemistry 30: 5361-5369
18. Ermler U, Fritzsch G, Buchanan SK, Michel H (1994) Structure of the photosynthetic reaction centre from Rhodobacter sphaeroides at 2.65 Å resolution: cofactors and protein-cofactor interactions. Structure 2: 925-936
19. Gunner MR (1991) The reaction center protein from purple bacteria. Structure and function. In: Lee CP (ed) Current Topics in Bioenergetics, vol 16. Academic Press, New York, pp 319-367
20. Komiya H, Yeates TO, Rees DC, Allen JP, Feher G (1988) Structure of the reaction center from Rhodobacter sphaeroides R-26 and 2.4.1.: symmetry relations and sequence comparisons between different species. Proc Natl Acad Sci USA 85: 9012-9016
21. Paddock ML, Rongey SH, Feher G, Okamura MY (1989) Pathway of proton transfer in bacterial reaction centers. Replacement of glutamic acid 212 in the L-subunit by glutamine inhibits quinone (secondary acceptor) turnover. Proc Natl Acad Sci USA 86: 6602-6606
22. Paddock ML, McPherson PH, Feher G, Okamura MY (1990) Pathway of proton transfer in bacterial reaction centers. Replacement of serine-L223 by alanine inhibits electron and proton transfers associated with reduction of quinone to dihydroquinone. Proc Natl Acad Sci USA 87: 6803-6807
23. Reiss-Husson F, Arnoux B, Ducruix A, Steck K, Mäntele W, Schiffer M, Chang CH (1990) Spectroscopic and structural studies of crystallized reaction centres from wild type Rhodobacter sphaeroides Y. In: Drews G and Dawes EA (eds) Molecular Biology of Membrane-Bound Complexes in Phototrophic Bacteria. Plenum Press, New York, pp. 323-328
24. Roth M, Lewit-Bentley A, Michel H, Deisenhofer J, Huber R, Oesterhelt D (1989) Detergent structure in crystals of a bacterial photosynthetic reaction centre. Nature 340: 659-662
25. Roth M, Arnoux B, Ducruix R, Reiss-Husson F (1991) Structure of the detergent phase and protein-detergent interactions in crystals of the wild-type (strain-Y) Rhodobacter sphaeroides photochemical reaction center. Biochemistry 30: 9403-9413
26. Sheldrick GM (1993) SHELXL93. Program for the Refinement of Crystal Structures. University of Göttingen, Germany
27. Sousa R, Later EM, Wang BC (1991) Preparation of crystals of T7 RNA polymerase suitable for high-resolution X-ray structure analysis. J Crystal Growth 110: 237-246
28. Stilz HU, Finkele U, Holzapfel W, Lauterwasser C, Zinth W, Oesterhelt D (1994) Influence of M subunit Thr222 and Trp252 on quinone binding and electron transfer in Rhodobacter sphaeroides reaction centres. Eur J Biochem 223: 233-242
29. Tronrud DE, Schmid MF, Matthews BW (1986) Structure and X-ray amino acid sequence of a bacteriochlorophyll a protein from Prosthecochloris aestuarii refined at 1.9 Å resolution. J Mol Biol 188: 443-454
30. B sites of the photosynthetic reaction center protein. Biochemistry 33: 7830-7841
31. Yeates TO, Komiya H, Chirino A, Rees D, Allen JP, Feher G (1988) Structure of the reaction center from Rhodobacter sphaeroides R26 and 2.4.1.: protein-cofactor (bacteriochlorophyll, bacteriopheophytin, and carotenoid) interactions. Proc Natl Acad Sci USA 85: 7993-7997