Karyotype distributions in a stochastic model of reciprocal translocation

Genome Research

Volumn 6, Issue 1, 1996, Pages 1-9

  Sankoff, David ^a   Ferretti, Vincent ^a  

^a UNIVERSITÉ DE MONTRÉAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME; CHROMOSOME SIZE; GENOME; KARYOTYPE; PRIORITY JOURNAL; RECIPROCAL CHROMOSOME TRANSLOCATION; SIMULATION; STOCHASTIC MODEL;

EID: 0030005162     PISSN: 10549803     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.6.1.1     Document Type: Article

References (16)

1. Bafna, V. and P.A. Pevzner. 1995. Sorting by transpositions. Proceedings of the Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 614-623.
2. Hannenhalli, S. 1995. Polynomial algorithm for computing translocation distance between genomes. Proceedings of the 6th Symposium on Combinatorial Pattern Matching, Springer-Verlag Lecture Notes Comput. Sci.: 162-176.
3. Hannenhalli, S. and P.A. Pevzner. 1995. Transforming cabbage into turnip, (polynomial algorithm for sorting signed permutations by reversals). In Proceedings of the 27th Annual ACM-SIAM Symposium on the Theory of Computing, pp. 178-189. ACM, New York, NY.
4. Jackson, R.C. 1957. New low chromosome number for plants. Science 126: 1115-1116.
5. Kececioglu, J. and R. Ravi. 1995. Of mice and men. Evolutionary distances between genomes under translocation. Proceedings of the Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 604-613.
6. Kececioglu, J. and D. Sankoff. 1994. Efficient bounds for oriented chromosome inversion distance. Proceedings of the Fifth Symposium on Combinatorial Pattern Matching, (Springer Verlag Lecture Notes in Computer Science) 807: 307-325.
7. _. 1995. Exact and approximation algorithms for sorting by reversals, with application to genome rearrangement. Algorithmica 13: 180-210.
8. King, R.C. 1975. Handbook of genetics. Plenum Press, New York, NY.
9. Lima-de-Faria, A. 1980. How to produce a human with 3 chromosomes and 1000 primary genes. Hereditas 93: 47-73.
10. Nadeau, J.H. and B.A. Taylor. 1984. Lengths of chromosomal segments conserved since divergence of man and mouse. Proc. Nat. Acad. Sci. 81: 814.
11. Sankoff, D. 1992. Edit distance for genome comparison based on non-local operations. Proceedings of the Third Symposium on Combinatorial Pattern Matching, (Springer Verlag Lecture Notes in Computer Science) 644: 121-135.
12. _. 1993a. Analytical approaches to genomic evolution. Biochimie 75: 409-413.
13. _. 1993b. Models and analyses of genomic evolution. In Second International Conference on Bioinformatics, Supercomputing and Complex Genome Analysis.
14. Sankoff, D., G. Leduc, N. Antoine, B. Paquin, B.F. Lang, and R. Cedergren. 1992. Gene order comparisons for phylogenetic inference: Evolution of the mitochondrial genome. Proc. Nat. Acad. Sci. 89: 6575-6579.
15. Schulz-Schaeffer, J. 1980. Cytogenetics. Springer-Verlag, New York, NY.
16. Swanson, C.P., T. Merz, and W.J. Young. 1981. Cytogenetics, 2nd ed. Prentice Hall, Englewood Cliffs, NJ.