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Volumn 59, Issue 1-2, 1996, Pages 33-43

Capture and RT-PCR of hepatitis C virus RNA with safety primers

Author keywords

Genome alignment; Guanidinium thiocyanate denaturation; Hepatitis C; Liquid hybridization; Safety primers

Indexed keywords

VIRUS RNA;

EID: 0029996725     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/0166-0934(96)02003-4     Document Type: Article
Times cited : (6)

References (42)
  • 1
    • 0026056970 scopus 로고
    • Genetic disease detection and DNA amplification using cloned thermostable ligase
    • Barany, F. (1991) Genetic disease detection and DNA amplification using cloned thermostable ligase. Proc. Natl. Acad. Sci. USA 88, 189-193.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 189-193
    • Barany, F.1
  • 4
    • 0026728652 scopus 로고
    • Sequence analysis of the 5′ noncoding region of hepatitis C virus
    • Bukh, J., Purcell, R.H. and Miller, R.H. (1992a) Sequence analysis of the 5′ noncoding region of hepatitis C virus. Proc. Natl. Acad. Sci. USA 89, 4942-4946.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 4942-4946
    • Bukh, J.1    Purcell, R.H.2    Miller, R.H.3
  • 5
    • 0026565596 scopus 로고
    • Importance of primer selection for the detection of hepatitis C virus RNA with the polymerase chain reaction assay
    • Bukh, J., Purcell, R.H. and Miller, R.H. (1992b) Importance of primer selection for the detection of hepatitis C virus RNA with the polymerase chain reaction assay. Proc. Natl. Acad. Sci. USA 89, 187-191.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 187-191
    • Bukh, J.1    Purcell, R.H.2    Miller, R.H.3
  • 6
    • 0027214322 scopus 로고
    • At least 12 genotypes of hepatitis C virus predicted by sequence analysis of the putative E1 gene of isolates collected worldwide
    • Bukh, J., Purcell, R.H. and Miller, R.H. (1993) At least 12 genotypes of hepatitis C virus predicted by sequence analysis of the putative E1 gene of isolates collected worldwide. Proc. Natl. Acad. Sci. USA 90, 8234-8238.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 8234-8238
    • Bukh, J.1    Purcell, R.H.2    Miller, R.H.3
  • 7
    • 0026643730 scopus 로고
    • Impact of specimen handling and storage on detection of hepatitis C virus RNA
    • Busch, M.P., Wilber, J.C., Johnson, P., Tobler, L. and Evans, C.S. (1992) Impact of specimen handling and storage on detection of hepatitis C virus RNA. Transfusion 32, 420-425.
    • (1992) Transfusion , vol.32 , pp. 420-425
    • Busch, M.P.1    Wilber, J.C.2    Johnson, P.3    Tobler, L.4    Evans, C.S.5
  • 10
    • 0026472945 scopus 로고
    • Storage conditions of blood samples and primer selection affect the yield of cDNA polymerase chain reaction products of hepatitis C virus
    • Cuypers, H.T., Bresters, D., Winkel, I.N., Reesink, H.W., Weiner, A.J., Houghton, M., van-der-Poel, C.L. and Lelie, P.N. (1992) Storage conditions of blood samples and primer selection affect the yield of cDNA polymerase chain reaction products of hepatitis C virus. J. Clin. Microbiol. 30, 3220-3224.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 3220-3224
    • Cuypers, H.T.1    Bresters, D.2    Winkel, I.N.3    Reesink, H.W.4    Weiner, A.J.5    Houghton, M.6    Van-Der-Poel, C.L.7    Lelie, P.N.8
  • 14
    • 0025146291 scopus 로고
    • Enhanced detection by PCR of hepatitis C virus RNA
    • Garson, J.A., Ring, C., Tuke, P. and Tedder, R.S. (1990a) Enhanced detection by PCR of hepatitis C virus RNA [letter]. Lancet 336, 878-879.
    • (1990) Lancet , vol.336 , pp. 878-879
    • Garson, J.A.1    Ring, C.2    Tuke, P.3    Tedder, R.S.4
  • 15
    • 0025369881 scopus 로고
    • Detection of hepatitis C viral sequences in blood donations by 'nested' polymerase chain reaction and prediction of infectivity
    • Garson, J.A., Tedder, R.S., Briggs, M., Tuke, P., Glazebrook, J.A., Trute, A., Parker, D., Barbara, J.A., Contreras, M. and Aloysius, S. (1990b) Detection of hepatitis C viral sequences in blood donations by 'nested' polymerase chain reaction and prediction of infectivity [see comments]. Lancet 335, 1419-1422.
    • (1990) Lancet , vol.335 , pp. 1419-1422
    • Garson, J.A.1    Tedder, R.S.2    Briggs, M.3    Tuke, P.4    Glazebrook, J.A.5    Trute, A.6    Parker, D.7    Barbara, J.A.8    Contreras, M.9    Aloysius, S.10
  • 17
    • 0028625784 scopus 로고
    • Evaluation of different serum RNA extraction protocols using quantitative HCV-RNA
    • Goergen, B., Jakobs, S., Meyer-zum-Buschenfelde, K.H. and Gerken, G. (1994) Evaluation of different serum RNA extraction protocols using quantitative HCV-RNA [letter]. J. Hepatology 21, 1157.
    • (1994) J. Hepatology , vol.21 , pp. 1157
    • Goergen, B.1    Jakobs, S.2    Meyer-Zum-Buschenfelde, K.H.3    Gerken, G.4
  • 18
    • 0026721393 scopus 로고
    • Use of aminotransferase, hepatitis C antibody, and hepatitis C polymerase chain reaction RNA assays to establish the diagnosis of hepatitis C virus infection in a diagnostic virology laboratory
    • Gretch, D., Lee, W. and Corey, L. (1992) Use of aminotransferase, hepatitis C antibody, and hepatitis C polymerase chain reaction RNA assays to establish the diagnosis of hepatitis C virus infection in a diagnostic virology laboratory. J. Clin. Microbiol. 30, 2145-2149.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2145-2149
    • Gretch, D.1    Lee, W.2    Corey, L.3
  • 19
    • 0027461414 scopus 로고
    • Quantitation of hepatitis C virus RNA in serum of asymptomatic blood donors and patients with type C chronic liver disease
    • Hagiwara, H., Hayashi, N., Mita, E., Naito, M., Kasahara, A., Fusamoto, H. and Kamada, T. (1993) Quantitation of hepatitis C virus RNA in serum of asymptomatic blood donors and patients with type C chronic liver disease. Hepatology 17, 545-550.
    • (1993) Hepatology , vol.17 , pp. 545-550
    • Hagiwara, H.1    Hayashi, N.2    Mita, E.3    Naito, M.4    Kasahara, A.5    Fusamoto, H.6    Kamada, T.7
  • 20
    • 0026071871 scopus 로고
    • Characterization of the terminal regions of hepatitis C viral RNA: Identification of conserved sequences in the 5′ untranslated region and poly(A) tails at the 3′ end
    • Han, J.H., Shyamala, V., Richman, K.H., Brauer, M.J., Irvine, B., Urdea, M.S., Tekamp-Olson, P., Kuo, G., Choo, Q.L. and Houghton, M. (1991) Characterization of the terminal regions of hepatitis C viral RNA: identification of conserved sequences in the 5′ untranslated region and poly(A) tails at the 3′ end. Proc. Natl. Acad. Sci. USA 88, 1711-1715.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 1711-1715
    • Han, J.H.1    Shyamala, V.2    Richman, K.H.3    Brauer, M.J.4    Irvine, B.5    Urdea, M.S.6    Tekamp-Olson, P.7    Kuo, G.8    Choo, Q.L.9    Houghton, M.10
  • 21
    • 0028598717 scopus 로고
    • Liquid-phase hybridization and capture of hepatitis B virus DNA with magnetic beads and fluorescence detection of PCR product
    • Heermann, K.H., Hagos, Y. and Thomssen, R. (1994) Liquid-phase hybridization and capture of hepatitis B virus DNA with magnetic beads and fluorescence detection of PCR product. J. Virol. Methods 50, 43-57.
    • (1994) J. Virol. Methods , vol.50 , pp. 43-57
    • Heermann, K.H.1    Hagos, Y.2    Thomssen, R.3
  • 22
    • 0026254627 scopus 로고
    • OSP: A computer program for choosing PCR and DNA sequencing primers
    • Hillier, L. and Green, P. (1991) OSP: A computer program for choosing PCR and DNA sequencing primers. PCR Methods Appl. 1, 124-128.
    • (1991) PCR Methods Appl. , vol.1 , pp. 124-128
    • Hillier, L.1    Green, P.2
  • 23
    • 0025159318 scopus 로고
    • The polymerase chain reaction in transfusion medicine
    • Jackson, J.B. (1990) The polymerase chain reaction in transfusion medicine. Transfusion 30, 51-57.
    • (1990) Transfusion , vol.30 , pp. 51-57
    • Jackson, J.B.1
  • 24
    • 0025918647 scopus 로고
    • NASBA isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection
    • Kievits, T., van Gemen, B. and van Strijp, D. (1991) NASBA isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection. J. Virol. Methods 35, 273-1286.
    • (1991) J. Virol. Methods , vol.35 , pp. 273-1286
    • Kievits, T.1    Van Gemen, B.2    Van Strijp, D.3
  • 26
    • 0027276247 scopus 로고
    • Significance of serum hepatitis C virus RNA levels in chronic hepatitis C
    • [published erratum appears in Lancet 1993 Aug 21; 342 (8869): 504] [see comments]
    • Lau, J.Y., Davis, G.L., Kniffen, J., Qian, K.P., Urdea, M.S., Chan, C.S., Mizokami, M., Neuwald, P.D. and Wilber, J.C. (1993) Significance of serum hepatitis C virus RNA levels in chronic hepatitis C [published erratum appears in Lancet 1993 Aug 21; 342 (8869): 504] [see comments]. Lancet 341, 1501-1504.
    • (1993) Lancet , vol.341 , pp. 1501-1504
    • Lau, J.Y.1    Davis, G.L.2    Kniffen, J.3    Qian, K.P.4    Urdea, M.S.5    Chan, C.S.6    Mizokami, M.7    Neuwald, P.D.8    Wilber, J.C.9
  • 28
    • 0027416074 scopus 로고
    • Hepatitis C viral RNA in clotting factor concentrates and the development of hepatitis in recipients
    • Makris, M., Garson, J.A., Ring, C.J., Tuke, P.W., Tedder, R.S. and Preston, F.E. (1993) Hepatitis C viral RNA in clotting factor concentrates and the development of hepatitis in recipients. Blood 81, 1898-1902.
    • (1993) Blood , vol.81 , pp. 1898-1902
    • Makris, M.1    Garson, J.A.2    Ring, C.J.3    Tuke, P.W.4    Tedder, R.S.5    Preston, F.E.6
  • 29
    • 0026751054 scopus 로고
    • Full-length sequence of a hepatitis C virus genome having poor homology to reported isolates: Comparative study of four distinct genotypes
    • Okamoto, H., Kurai, K., Okada, S., Yamamoto, K., Lizuka, H., Tanaka, T., Fukuda, S., Tsuda, F. and Mishiro, S. (1992) Full-length sequence of a hepatitis C virus genome having poor homology to reported isolates: comparative study of four distinct genotypes. Virology 188, 331-341.
    • (1992) Virology , vol.188 , pp. 331-341
    • Okamoto, H.1    Kurai, K.2    Okada, S.3    Yamamoto, K.4    Lizuka, H.5    Tanaka, T.6    Fukuda, S.7    Tsuda, F.8    Mishiro, S.9
  • 31
    • 84982623261 scopus 로고
    • Hepatitis C virus infection from blood and blood products
    • van der Poel, C.L. (1994) Hepatitis C virus infection from blood and blood products. FEMS Microbiol. Rev. 14, 241-246.
    • (1994) FEMS Microbiol. Rev. , vol.14 , pp. 241-246
    • Van Der Poel, C.L.1
  • 32
    • 33745158157 scopus 로고
    • A simple method of estimating fifty percent endpoints
    • Reed, L.J. and Muench, H. (1938) A simple method of estimating fifty percent endpoints. Am. J. Hyg. 27, 493-497.
    • (1938) Am. J. Hyg. , vol.27 , pp. 493-497
    • Reed, L.J.1    Muench, H.2
  • 33
    • 0027223536 scopus 로고
    • Lack of mother-to-infant transmission of hepatitis C virus in human immunodeficiency virus-seronegative women: A prospective study with hepatitis C virus RNA testing
    • Roudot-Thoraval, F., Pawlotsky, J.M., Thiers, V., Deforges, L., Girollet, P.P., Guillot, F., Huraux, C., Aumont, P., Brechot, C. and Dhumeaux, D. (1993) Lack of mother-to-infant transmission of hepatitis C virus in human immunodeficiency virus-seronegative women: a prospective study with hepatitis C virus RNA testing. Hepatology 17, 772-777.
    • (1993) Hepatology , vol.17 , pp. 772-777
    • Roudot-Thoraval, F.1    Pawlotsky, J.M.2    Thiers, V.3    Deforges, L.4    Girollet, P.P.5    Guillot, F.6    Huraux, C.7    Aumont, P.8    Brechot, C.9    Dhumeaux, D.10
  • 34
    • 0027522145 scopus 로고
    • Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region
    • Simmonds, P., Holmes, E.C., Cha, T.A., Chan, S.W., McOmish, F., Irvine, B., Beall, E., Yap, P.L., Kolberg, J. and Urdea, M.S. (1993a) Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region. J. Gen. Virol. 74, 2391-2399.
    • (1993) J. Gen. Virol. , vol.74 , pp. 2391-2399
    • Simmonds, P.1    Holmes, E.C.2    Cha, T.A.3    Chan, S.W.4    McOmish, F.5    Irvine, B.6    Beall, E.7    Yap, P.L.8    Kolberg, J.9    Urdea, M.S.10
  • 35
    • 0027459488 scopus 로고
    • Sequence variability in the 5′ non-coding region of hepatitis C virus: Identification of a new virus type and restrictions on sequence diversity
    • Simmonds, P., McOmish, F., Yap, P.L., Chan, S.W., Lin, C.K., Dusheiko, G., Saeed, A.A. and Holmes, E.C. (1993b) Sequence variability in the 5′ non-coding region of hepatitis C virus: identification of a new virus type and restrictions on sequence diversity. J. Gen. Virol. 74, 661-668.
    • (1993) J. Gen. Virol. , vol.74 , pp. 661-668
    • Simmonds, P.1    McOmish, F.2    Yap, P.L.3    Chan, S.W.4    Lin, C.K.5    Dusheiko, G.6    Saeed, A.A.7    Holmes, E.C.8
  • 41
    • 0026734297 scopus 로고
    • Detection of hepatitis C virus by polymerase chain reaction and response to interferon-alpha therapy: Relationship to genotypes of hepatitis C virus
    • Yoshioka, K., Kakumu, S., Wakita, T., Ishikawa, T., Itoh, Y., Takayanagi, M., Higashi, Y., Shibata, M. and Morishima, T. (1992) Detection of hepatitis C virus by polymerase chain reaction and response to interferon-alpha therapy: relationship to genotypes of hepatitis C virus. Hepatology 16, 293-299.
    • (1992) Hepatology , vol.16 , pp. 293-299
    • Yoshioka, K.1    Kakumu, S.2    Wakita, T.3    Ishikawa, T.4    Itoh, Y.5    Takayanagi, M.6    Higashi, Y.7    Shibata, M.8    Morishima, T.9
  • 42
    • 0027502086 scopus 로고
    • Reliability of polymerase chain reaction for detection of hepatitis C virus
    • Zaaijer, H.L., Cuypers, H.T., Reesink, H.W., Winkel, I.N., Gerken, G. and Lelie, P.N. (1993) Reliability of polymerase chain reaction for detection of hepatitis C virus. Lancet 341, 722-724.
    • (1993) Lancet , vol.341 , pp. 722-724
    • Zaaijer, H.L.1    Cuypers, H.T.2    Reesink, H.W.3    Winkel, I.N.4    Gerken, G.5    Lelie, P.N.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.