Delineation of an active fragment and poly(L-proline) II conformation for candidacidal activity of bactenecin 5

Biochemistry

Volumn 35, Issue 14, 1996, Pages 4314-4325

  Raj, Periathamby Antony ^a   Marcus, Emil ^a   Edgerton, Mira ^a  

^a UNIVERSITY AT BUFFALO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTENECIN;

ANTIFUNGAL ACTIVITY; ARTICLE; CANDIDIASIS; DRUG CONFORMATION; DRUG MECHANISM; NONHUMAN; PRIORITY JOURNAL; STRUCTURE ACTIVITY RELATION;

AMINO ACID SEQUENCE; ANIMALS; ANTIFUNGAL AGENTS; CANDIDA ALBICANS; CATTLE; CIRCULAR DICHROISM; MAGNETIC RESONANCE SPECTROSCOPY; MEMBRANE LIPIDS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; PEPTIDES; PEPTIDES, CYCLIC; PROTEIN CONFORMATION; SPECTROMETRY, FLUORESCENCE;

EID: 0029989651     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi951681r     Document Type: Article

References (64)

1. Adzhuber, A. A., & Sternberg, M. J. E. (1993) J. Mol. Biol. 229, 472-493.
2. Arnott, S., & Dover, S. D. (1968) Acta Crystallogr. B24, 599-601.
3. Baum, B. J., Bird, J. L., & Longton, R. W. (1977) J. Dent. Res. 56, 1115-1118.
4. Bax, A., Byrd, R. A., & Azolos, A. (1984) J. Am. Chem. Soc. 106, 7632-7633.
5. Bevins, C. L., & Zasloff, M. (1990) Annu. Rev. Biochem. 59, 395-414.
6. Blundell, T. L., Pitts, J. E., Tickle, I. J., Woods, S. P., & Wu, C. W. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 4175-4179.
7. Braunschweiler, L., & Ernst, R. R. (1983) J. Magn. Reson. 53, 521-528.
8. Bystrov, V. F. (1976) Prog. NMR Spectrosc. 10, 41-81.
9. Carver, J. P., & Blout, E. R. (1977) in Treatise on Collagen (Ramachandran, G. N., Ed.) Vol. 1, pp 441, Academic Press, New York.
10. Dyson, H. J., & Wright, P. E. (1991) Annu. Rev. Biophys. Biophys. Chem. 20, 519-538.
11. Epand, R. M., Gawish, A., Iqbal, M., Guptta, K. B., Chen, C. H., Segrest, J. P., & Anantharamaiah, G. M. (1987) J. Biol. Chem. 262, 9389-9396.
12. Erspamer, V. (1984) Comp. Biochem. Physiol. 79, 1-7.
13. Frank, R. W., Gennaro, R., Schneider, K., Przybylski, M., & Romeo, D. (1990) J. Biol. Chem. 265, 18871-18874.
14. Ganz, T., Selsted, M. E., Szklarek, D., Harwig, S. S. L., Daher, K. A., Bainton, D. F., & Lehrer, R. I. (1985) J. Clin. Invest. 76, 1427-1435.
15. Gennaro, R., Dolzani, L., & Romeo, D. (1983) Infect. Immun. 40, 684-690.
16. Gennaro, R., Skerlavaj, B., & Romeo, D. (1989) Infect. Immun. 57, 3142-3146.
17. Güntert, P., & Wüthrich, K. (1991) J. Biomol. NMR 1, 447-456.
18. Güntert, P., Braun, W., & Wüthrich, K. (1991) J. Mol. Biol. 217, 517-530.
19. Helbecque, N., & Lefebvre, M. H. L. (1978) Int. J. Pept. Protein Res. 11, 353-362.
20. Higashijima, T., Inubushi, T., Ueno, T., & Miyazawa, T. (1979) FEBS Lett. 105, 337-340.
21. Hopfinger, A. J. (1973) Conformational Properties of Macromolecules, Academic Press, New York.
22. IUPAC-IUB Commission on Biochemical Nomenclature (1968) Biochemistry 7, 2703-2705.
23. Jeener, J., Meier, B. H., Bachmann, P., & Ernst, R. R. (1979) J. Chem. Phys. 71, 4546-4553.
24. Kagan, B. L., Selsted, M. E., Ganz, T., & Lehrer, R. I. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 210-214.
25. Kaiser, E., Colescott, R. L., Bossinger, C. D., & Cook, P. I. (1970) Anal. Biochem. 34, 595-598.
26. Kumar, A., Ernst, R. R., & Wüthrich, K. (1980) Biochem. Biophys. Res. Commun. 64, 2229-2246.
27. Laemmli, U. K. (1970) Nature 227, 680-685.
28. Lear, J. D., Wasserman, Z. R., & Degrado, W. F. (1988) Science 240, 1177-1181.
29. Lehrer, R. I., Ganz, T., & Selsted, M. E. (1988) Haematol. Oncol. Clin. N. Am. 2, 159-169.
30. Loomis, R. E., Bergey, E. J., Levine, M. J., & Tabak, L. A. (1985) Int. J. Pept. Protein Res. 26, 621-629.
31. MacArthur, M. W., & Thornton, J. M. (1991) J. Mol. Biol. 218, 397-412.
32. Makarov, A. A., Lobachov, V. M., Adzhubei, I. A., & Esipova, N. G. (1992) FEBS Lett. 306, 63-65.
33. Miyata, T., Tokunaga, F., Yoneya, T., Yoshikawa, K., Iwanaga, S., Niwa, M., Takao, T., & Shimonishi, Y. (1989) J. Biochem. (Tokyo) 106, 663-668.
34. Oppenheim, F. G. (1989) in Human Saliva: Clinical Chemistry and Microbiology (Tenovuo, J. O., Ed.) CRC Press, Boca Raton, FL.
35. Pardi, A., Wagner, G., & Wüthrich, K. (1983) Eur. J. Biochem. 137, 445-454.
36. Paul, P. K. C., & Ramakrishnan, C. (1985a) J. Biomol. Struct. Dyn. 2, 879-898.
37. Paul, P. K. C., & Ramakrishnan, C. (1985b) Int. J. Pept. Protein Res. 29, 433-454.
38. Powell, M. J. D. (1971) Math. Program 12, 241-254.
39. Rabanal, F., Ludevid, M. D., & Giralt, E. (1993) Biopolymers 33, 1019-1028.
40. Raghothama, S., Ramakrishnan, C., Balasubramanian, D., & Balaram, P. (1989) Biopolymers 28, 573-588.
41. Raj, P. A., & Edgerton, M. (1995) FEBS Lett. 368, 526-530.
42. Raj, P. A., Edgerton, M., & Levine, M. J. (1990) J. Biol. Chem. 265, 3898-3905.
43. Raj, P. A., Johnsson, M., Levine, M. J., & Nancollas, G. H. (1992) J. Biol. Chem. 267, 5968-5976.
44. Ronish, E. W., & Krimm, S. (1974) Biopolymers 13, 1635-1651.
45. Scocchi, M. E., Skerlavaj, B., Romeo, D., & Gennaro, R. (1992) Eur. J. Biochem. 209, 589-595.
46. Selsted, M. E., Brown, D. M., DeLange, R. J., Harwig, S. S. L., & Lehrer, R. I. (1985) J. Biol. Chem. 260, 4579-4584.
47. Shenderovich, M. D., Nikiforovich, G. V., & Chipens, G. I. (1984) J. Magn. Reson. 59, 1-12.
48. Sreerama, N., & Woody, R. W. (1994) Biochemistry 33, 10022-10025.
49. States, D. J., Haberkorn, R. A., & Ruben, D. J. (1982) J. Magn. Reson. 48, 286-292.
50. Stewart, J. M., & Young, J. D. (1984) Solid Phase Peptide Synthesis, pp 73-95, Pierce Chemical Co., Rockford, IL.
51. Straubinger, R. M., & Papahadjopoulos, D. (1982) Methods Enzymol. 101, 512, 527.
52. Sundstrom, P. M., Nicols, E. J., & Kenny, G. E. (1987) Infect. Immun. 55, 616-620.
53. Tiffany, M. L., & Krimm, S. (1972) Biopolymers 11, 2309-2316.
54. Vaara, M. (1992) Microbiol. Rev. 56, 395-411.
55. Vijayakumar, E. K. S., Sudha, T. S., & Balaram, P. (1984) Biopolymers 23, 877-886.
56. Weiner, S. J., Kolmann, P. A., Case, D. A., Singh, U. C., Ohio, C., Alagona, G., Profeta, S., Jr., & Weiner, P. (1984) J. Am. Chem. Soc. 106, 765-784.
57. Weiner, S. J., Kollman, P. A., Nguyen, D. T., & Case, D. A. (1986) J. Comput. Chem. 7, 230.
58. Woody, R. W. (1992) Adv. Biophys. Chem. 2, 37-79.
59. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids, John Wiley & Sons, New York.
60. Wüthrich, K., Billeter, M., & Braun, W. (1984) J. Mol. Biol. 180, 715-740.
61. Xu, T., Telser, R. F., Troxler, R. F., & Oppenheim, F. G. (1990) J. Dent. Res. 69, 1717-1723.
62. Zanetti, M., Litteri, L., Gennaro, R., Horstmann, H., & Romeo, D. (1990) J. Cell Biol. 111, 1363-1371.
63. Zanetti, M., Litteri, L., Griffiths, G., Gennaro, R., & Romeo, D. (1991) J. Immunol. 146, 4295-4300.
64. Zanetti, M., Sal, G. D., Storici, P., Schneider, C., & Romeo, D. (1993) J. Biol. Chem. 268, 522-526.