Comparative study of rbcL gene sequences in Fagopyrum and related taxa

Genes and Genetic Systems

Volumn 71, Issue 4, 1996, Pages 219-224

  Yasui, Yasuo ^a   Ohnishi, Ohmi ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; NONHUMAN; NUCLEIC ACID BASE SUBSTITUTION; SPECIES DIFFERENCE; TAXONOMY; WHEAT;

BASE SEQUENCE; DNA, PLANT; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT PROTEINS; RIBULOSE-BISPHOSPHATE CARBOXYLASE; TRITICUM;

CARYOPHYLLALES; FAGOPYRUM; FAGOPYRUM CYMOSUM; FAGOPYRUM TATARICUM; PERSICARIA; PLUMBAGINACEAE; RUMEX; TRITICUM AESTIVUM;

EID: 0029977912     PISSN: 13417568     EISSN: None     Source Type: Journal    
DOI: 10.1266/ggs.71.219     Document Type: Article

References (30)

1. Cronquist, A. (1981) An intergrated system of classification of flowering plants. Columbia Univ. Press, New York.
2. Dahlgren, R. (1983) General aspects of angiosperm evolution and macrosystematics. Nord. J. Bot. 3, 119-149.
3. Dahlgren, R. and Bremer, K. (1985) Major clades of the angiosperms. Cladistics 1, 349-368.
4. Felsenstein, J. (1985) Confidence limits on phylogeny: an approach using the bootstrap. Evolution 39, 783-791.
5. Felsenstein, J. (1993) PHYLIP (Phylogeny Inference Package), version 3.5s. Department of Genetics, University of Washington, Seattle.
6. Giannasi, D. E., Zurawski, G., Learn, G. and Clegg, M. T. (1992) Evolutionary relationships of the Caryophyllidae based on compartative rbcL sequencies. Syst. Bot. 17, 1-15.
7. Gross, H. (1913) Remarques sul les Polygonees de l'Asie Orientale. Bul. Geog. Bot. le Mans 23, 7-32.
8. Hedberg, O. (1945) Pollen morphology in the genus Polygonum l.s. lat. and its taxonomic significance. Sven. Bot. Tisdskr. 40, 371-404.
9. Ina, Y. (1994) ODEN: A program package for molecular evolutionary analysis and database search of DNA and aminoacid sequences. Natl. Instit. Genetics, Mishima.
10. Kimura, M. (1980) A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120.
11. Kishima, Y., Ogura, K., Mizukami, K., Mikami, T. and Adachi, T. (1995) Chloroplast DNA analysis in buckwheat species: phylogenetic relationships, origin of the reproductive systems and extended inverted repeats. Plant Sci. 108, 173-179.
12. Meisner, C. F. (1826) Monographiae Generis Polygoni Prodromus. Genevae.
13. Michalowski, C. B., Bohnet, H. J., Klessig, D. F. and Berry, J. O. (1990) Nucleotide sequence of rbcL from Amaranthus hypochondriacus chloroplast. Nucleic Acid Res. 18, 2187
14. Nakai, T. (1926) A new classification of Linnean Polygonum. Rigakkai 24, 289-301. (in Japanese)
15. Ohnishi, O. (1983) Isozyme variation in common buckwheat, Fagopyrum esculentum Moench, and its related species. Proc. 2nd Intl. Symp. Buckwheat, Miyazaki, 39-50.
16. Ohnishi, O. (1991) Discovery of the wild ancestor of common buckwheat. Fagopyrum 11, 5-10.
17. Ohnishi, O. (1995) Discovery of new Fagopyrum species and its implication for the studies of evolution of Fagopyrum and of the origin of cultivated buckwheat. Proc. 6th Intl. Symp. Buckwheat, Ina, 175-190.
18. Ohnishi, O. (1996) Search of the wild ancestor of buckwheat. I. Description of new Fagopyrum species and their distribution in China. Fagopyrum 15, (in press).
19. Ohnishi, O. and Matsuoka, Y. (1996) Search for the wild ancestor of buckheat. II. Taxonomy of Fagopyrum (Polygonaceae) species based on morphology, isozymes and cpDNA variability. Genes Genet. Syst. (in press).
20. Palmer, J. D. (1987) Chloroplast DNA evolution and biosystematic uses of chloroplast DNA variation. Am. Nat. 130, s6-s29.
21. Palmer, J. D., Jansen, R. K, Michaels, H. J., Chase, M. W. and Manhart, J. R. (1988) Chloroplast DNA variation and plant phylogeny. Ann. Mo. Bot. Gard. 75, 1180-1206.
22. Rettig, J. H., Wilson, H. D. and Manhart, J. R. (1992) Nucleotide sequence of Amaranthus tricolor rbcL. Taxon 41, 201-209.
23. Ritland, K. and Cleg, M. T. (1987) Evolutionary analysis of plant DNA sequences. Am. Nat. 130, s74-100.
24. Saiki, R. K., Celfand, D. H., Stoffel, S., Scharf, S. J., Higuchi, R., Horn, G. T., Millis, K. B. and Erilich, H. A. (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239, 487-491.
25. Saitou, N. and Nei, M. (1987) The neighbour-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 405-425.
26. Steward, A. N. (1930) The Polygonaceae of eastern Asia. Contrib. Gray Herb. Harv. Univ. 88, 1-129.
27. Swofford, D. L. (1993) PAUP: phylogenetic analysis using parsimony, version 3.1.1. Computer program distirbuted by the Illinois Natural History Survey, Champaign.
28. Throne, R. F. (1983) Proposed new alignments in the angiosprms. Nord. J. Bot. 3, 85-117.
29. Wagner, D. B., Furonter, G. R., Saghai-Maroof, M. A., Williams, S. M., Dancik, B. P. and Allard, R. W. (1987) Chloroplast DNA polymorphisms in lodgepole and jack pine and their hybrids. Proc. Natl. Acad. Sci. USA 84, 2097-2100.
30. Zurawski, G., Perrot, B., Bottomley, W. and Whitfeld, P. R. (1981) The sturucture of the gene for the large subunit of ribulose-1, 5-bisphosphate carboxylase from spinach chloroplast DNA. Nucleic Acid Res. 9, 3251-3270.