Satellite DNA of the red flour beetle Tribolium castaneum - Comparative study of satellites from the genus Tribolium

Molecular Biology and Evolution

Volumn 13, Issue 8, 1996, Pages 1059-1066

  Ugarković, Durdica ^a   Podnar, Martina ^a   Plohl, Miroslav ^a  

^a RUDER BO KOVI INSTITUTE   (Croatia)

Author keywords

centromere; evolution; heterochromatin; phylogeny; satellite DNA; speciation; Tribolium castaneum

Indexed keywords

ADENINE; SATELLITE DNA; THYMINE;

ARTICLE; BEETLE; CENTROMERE; CHEMOTAXONOMY; CHIRONOMIDAE; CHROMOSOMAL LOCALIZATION; CYTOGENETICS; DNA SEQUENCE; GENOME; HETEROCHROMATIN; LARVA; MOLECULAR CLONING; NONHUMAN; PHYLOGENY; POINT MUTATION; SACCHAROMYCES CEREVISIAE; SPECIES DIFFERENCE;

CHIRONOMIDAE; CHIRONOMUS PALLIDIVITTATUS; COLEOPTERA; INSECTA; SACCHAROMYCES CEREVISIAE; TRIBOLIUM CASTANEUM; TRIBOLIUM FREEMANI;

EID: 0029974068     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025668     Document Type: Article

References (45)

1. ABAD, J. P., M. CARMENA, S. BAARS, R. D. SAUNDERS, D. M. GLOVER, P. UDENA, C. SENTIS, C. TYLER-SMITH, and A. VILLASANTE. 1992. Dodeca satellite: a conserved G+C rich satellite from centromeric heterochromatin of Drosophila melanogaster. Proc. Natl. Acad. Sci. USA 89: 4663-4667.
2. ALVAREZ-FUSTER, A., C. JUAN, and E. PETITPIERRE. 1991. Genome size in Tribolium flour-beetles: inter- and intraspecific variation. Genet. Res. 58:1-5.
3. ARNASON, U. P., P. W. ALLDERDICE, J. LIEN, and B. WIDEGREN. 1988. Highly repetitive DNA in the balean whale genera Balaenoptera and Megaptera. J. Mol. Evol. 27:217-221.
4. BACHMANN, L., and D. SPERLICH. 1993. Gradual evolution of a specific satellite DNA family in Drosophila ambigua, D. tristis, and D. obscura. Mol. Biol. Evol. 10:647-659.
5. BENSON, D., D. J. LIPMAN, and J. OSTELL. 1993. Genbank. Nucleic Acids Res. 21:2963-2965.
6. BROCCOLI, D., O. J. MILLER, and D. A. MILLER. 1990. Relationship of mouse minor satellite DNA to centromere activity. Cytogenet. Cell Genet. 54:182-186.
7. BROWN, S. J., J. K. HENRY, W. C. BLACK, and R. E. DENELL. 1990. Molecular genetic manipulation of the red flour beetle: genome organization and cloning of ribosomal protein gene. Insect Biochem. 20:185-193.
8. CHARLESWORTH, B., P. SNIEGOWSKI, and W. STEPHAN. 1994. The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371:215-220.
9. DOVER, G. 1982. Molecular drive: a cohesive mode of species evolution. Nature 299:111-117.
10. DOVER, G. 1993. Evolution of genetic redundancy for advanced players. Curr. Opin. Genet. Dev. 3:902-910.
11. FLEIG, U., J. D. BEINHAUER, and J. H. HEGEMANN. 1995. Functional selection for the centromere DNA from yeast chromosome VIII. Nucleic Acids Res. 23:922-924.
12. FORD, H., D. SOKOLOFF, and A. SOKOLOFF. 1992. Hybridization between T. castaneum and T. freemani - a possible exception. Tribolium Inf. Bull. 32:104-105.
13. FRY, K. and W. SALSER. 1977. Nucleotide sequences of HS - a satellite DNA from kangaroo rat Dipodomys ordii and characterization of similar sequences in other rodents. Cell 12:1069-1084.
14. HAAF, T., A. G. MATER, J. WENBERG, and D. C. WARD. 1995. Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific alpha-satellite DNA. J. Mol. Evol. 41:487-491.
15. JUAN, C., J. GOSALVEZ, R. MEZZANOTTE, and E. PETITPIERRE. 1991. Cytological and biochemical characterization of the in situ endonuclease digestion of fixed Tenebrio molitor chromosomes. Chromosoma 100:432-438.
16. JUAN, C., and E. PETITPIERRE. 1989. C-banding and DNA content in seven species of Tenebrionidae (Coleoptera). Genome 32:834-839.
17. _, 1991. Chromosome number and sex-determining systems in Tenebrionidae (Coleoptera). Pp. 167-176 in M. ZUNINO, X. BELLES, and M. BLAS. eds. Advances in coleopterology. AEC, Barcelona.
18. JUAN, C. P. VAZQUEZ, J. M. RUBIO, E. PETITPIERRE, and G. M. HEWITT. 1993. Presence of highly repetitive sequences in Tribolium flour-beetles. Heredity 70:1-8.
19. LOHE, A., and P ROBERTS. 1988. Evolution of satellite DNA sequences in Drosophila. Pp. 148-186 in R. S. VERMA, ed. Heterochromatin - molecular and structural aspects. Cambridge University Press.
20. MADSEN, S., J. E. BROOKS, E. DE KLOET, and S. R. DE KLOET, 1994. Sequence conservation of an avian centromeric repeated DNA component. Genome 37:351-355.
21. MIKLOS, G. L. G. 1985. Localized highly repetitive DNA sequences in vertebrate and invertebrate genomes. Pp. 241-321 in R. J. MACINTYRE, ed. Molecular evolutionary genetics. Plenum Press, New York.
22. MURO, Y., H. MASUMOTTO, K. YODA, N. NOZAKI, M. OHASHI, and T. OKAZAKI. 1992. Centromere protein B assembles human centromeric alpha-satellite at the 17-bp sequence, CENP-B box. J. Cell Biol. 116:585-596.
23. NAKAKITA, H., O. IMURA, and R. G. WINKS. 1981. Hybridization between T. freemani Hinton and T. castaneum Herbst and some preliminary studies on the biology of T. freemani (Coleoptera: Tenebrionidae). Appl. Ent. Zool. 16: 209-214.
24. PAGES, M. J., and G. P. ROIZES. 1984. Nature and organization of the sequence variations in the long-range periodicity calf satellite DNA I. J. Mol. Biol. 173:143-157.
25. PETITPIERRE, E., C. JUAN, J. PONS, M. PLOHL, and D. UGARKOVIO. 1995. Satellite DNA and constitutive heterochromatin in tenebrionid beetles. Pp. 351-362 in P. E. BRANDHAM and M. BENNETT, eds. Kew Chromosome Conference IV. Royal Botanic Gardens, Kew.
26. PINKEL, D., J. GRAY, B. TRASK, G. VAN DEN ENGH, J. FUSCOE, and H. VAN DEKKEN. 1986. Cytogenetic analysis by in situ hybridization with fluorescently labeled nucleic acid probes. Cold Spring Harb. Symp. Biol. 51:151-157.
27. PLOHL, M., V. LUCIJANIĆ-JUSTIĆ, D. UGARKOVIĆ, E. PETITPIERRE, and C. JUAN. 1993. Satellite DNA and heterochromatin of the flour beetle Tribolium confusum. Genome 36: 467-475.
28. PLOHL, M., and D. UGARKOVIĆ. 1994. Characterization of two abundant satellite DNAs from the mealworm Tenebrio obscurus. J. Mol. Evol. 39:489-495.
29. RADIĆ, M. Z., K. LUNDGREN, and B. A. HAMKALO. 1987. Curvature of mouse satellite DNA and condensation of heterochromatin. Cell 50:1101-1108.
30. ROVIRA, C., W. BEERMANN, and J. E. EDSTROM. 1993. A repetitive DNA sequence associated with the centromeres of Chironomus pallidivittatus. Nucleic Acids Res. 21:1775-1781.
31. SAINZ, J., and L. CORNUDELLA. 1990. Preservation of a complex satellite DNA in two species of Echinoderms. Nucleic Acids Res. 18:885-890.
32. SAMBROOK, L., E. F. FRITSCH, and T. MANIATIS. 1989. Molecular cloning. A laboratory manual. Cold Spring Harbor Laboratory. Cold Spring Harbor.
33. SANGER, F., S. NICKLEN, and A. R. COULSON. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5476.
34. SCHULMAN, I., and K. S. BLOOM. 1991. Centromeres: an integrated protein/DNA complex required for chromosome movement. Annu. Rev. Cell Biol. 7:311-336.
35. SHIMELD, L. 1989. A cytogenetic examination of eight species of Tribolium. Tribolium Inf. Bull. 29:102-107.
36. SMITH, S. G. 1952. The evolution of heterochromatin in the genus Tribolium (Tenebrionidae: Coleoptera). Chromosoma 4:585-610.
37. SMITH, S. G., and N. VIRKKI. 1978. Animal cytogenetics. Gebruder Borntraeger, Berlin.
38. STRACHAN, T., D. WEBB, and G. A. DOVER. 1985. Transition stages of molecular drive in multiple-copy DNA families in Drosophila. EMBO J. 4:1701-1708.
39. STUART, J. J., and G. MOCELIN. 1995. Cytogenetics of chromosome rearrangements in Tribolium castaneum. Genome 38:673-680.
40. SUMNER, A. T. 1990. Banding with fluorochromes other than quinacrine. Pp. 163-165 in U. HYMAN, ed. Chromosome banding. Unwin Hyman, London.
41. UGARKOVIĆ, D., S. DURAJLUA. and M. PLOHL. 1996. Evolution of Tribolium madens (Insecta. Coleoptera) satellite DNA through DNA inversion and insertion. J. Mol. Evol. 42: 350-358.
42. UGARKOVIĆ, D., E. PETITPIERRE, C. JUAN, and M. PLOHL. 1995. Satellite DNAs in tenebrionid species: structure, organization and evolution. Croat. Chem. Acta 68:627-638.
43. UGARKOVIĆ, D., M. PLOHL, V. LUCIJANIĆ-JUSTIĆ. and B. BORŚTNIK. 1992. Detection of satellite DNA in Palorus ratzeburgii: analysis of curvature profiles and comparison with Tenebrio molitor. Biochimie 74:1075-1082.
44. VIDAL-RIOJA, L., A. ZAMBELLI, and L. SEMORILE. 1994. An assessment of the relationships among species of Camelidae by satellite DNA comparison. Hereditas 121:283-290.
45. WEITH, A. 1985. The fine structure of euchromatin and centromeric heterochromatin in Tenebrio molitor chromosomes. Chromosoma 91:287-296.