Characterization of a second human clathrin heavy chain polypeptide gene (CLH-22) from chromosome 22q11

Human Molecular Genetics

Volumn 5, Issue 5, 1996, Pages 625-631

  Kedra, Darek ^a   Peyrard, Myriam ^a   Fransson, Ingegerd ^a   Collins, John E ^b   Dunham, Ian ^b   Roe, Bruce A ^c   Dumanski, Jan P ^a  

^a KAROLINSKA UNIVERSITY HOSPITAL   (Sweden)

^b WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^c UNIVERSITY OF OKLAHOMA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CLATHRIN; COMPLEMENTARY DNA;

ALTERNATIVE RNA SPLICING; AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; CHROMOSOME 17; CHROMOSOME 22Q; CONTROLLED STUDY; DNA SEQUENCE; EXON; FETUS; GENE ISOLATION; HEART; HOUSEKEEPING GENE; HUMAN; HUMAN TISSUE; MENINGIOMA; MOLECULAR CLONING; MOUSE; NONHUMAN; NORTHERN BLOTTING; OPEN READING FRAME; PRIORITY JOURNAL; SKELETAL MUSCLE; SOUTHERN BLOTTING; TESTIS; TUMOR SUPPRESSOR GENE;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; BASE SEQUENCE; BLOTTING, NORTHERN; CHROMOSOMES, HUMAN, PAIR 17; CHROMOSOMES, HUMAN, PAIR 22; CLATHRIN; GENE EXPRESSION REGULATION; HUMANS; MENINGEAL NEOPLASMS; MENINGIOMA; MOLECULAR SEQUENCE DATA; RESTRICTION MAPPING; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 0029971383     PISSN: 09646906     EISSN: None     Source Type: Journal    
DOI: 10.1093/hmg/5.5.625     Document Type: Article

References (25)

1. Kreis, T.E. (1992) Regulation of vesicular and tubular membrane traffic of the Golgi complex by coat proteins. Curr. Opinion Cell Biol., 4, 609-615.
2. Robinson, M.S. (1994) The role of clathrin, adaptors and dynamin in endocytosis. Curr Opinion Cell Biol., 6, 538-544.
3. Kirchhausen, T., Scarmato, P., Harrison, S.C., Monroe, J.J., Chow, E.P., Mattaliano, R.J., Ramachandran, K.L., Smart, J.E., Ahn, A.H. and Brosius, J. (1987) Clathrin light chains LCA and LCB are similar, polymorphic, and share repeated heptad motifs. Science, 236, 320-324.
4. Jackson, A.P., Seow, H F., Holmes, N., Drickamer, K. and Parham, P. (1987) Clathrin light chains contain brain-specific insertion sequences and a region of homology with intermediate filaments. Nature, 326, 154-159.
5. Jackson, A.P. and Parham, P (1988) Structure of human clathrin light chains. Conservation of light chain polymorphism in three mammalian species. J. Biol. Chem., 263, 16688-16695.
6. Kirchhausen, T., Harrison, S.C., Chow, E.P., Mattaliano, R.J., Ramachandran, K.L., Smart, J. and Brosius, J (1987) Clathrin heavy chain: molecular cloning and complete primary structure. Proc Natl Acad. Sci. USA, 84, 8805-8809.
7. Lemmon, S.K , Pellicena-Palle, A., Conley, K. and Freund, C.L. (1991) Sequence of the clathrin heavy chain from Saccharomyces cerevisiae and requirement of the COOH terminus for clathrin function. J. Cell. Biol., 112, 65-80.
8. Dodge, G.R., Kovalszky, I., McBride, W., Yi, H.F., Chu, M.L., Saitta, B., Stokes, D.G. and Iozzo, R.V. (1991) Human clathrin heavy chain (CTLC): partial molecular cloning, expression and mapping of the gene to human chromosome 17q11-qter. Genomics, 11, 174-178.
9. Nomura, N., Miyajima, N., Sazuka, T., Tanaka, A., Kawarabayashi, Y., Sato, S , Nagase, T., Seki, N., Ishikawa, K. and Tabata, S (1994) Prediction of the coding sequences of unidentified human genes I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1. DNA Res, 1, 27-35.
10. O'Halloran, T.J. and Anderson, R.G. (1992) Characterization of the clathrin heavy chain from Dictyostelium discoideum. DNA Cell Biol., 11, 321-30.
11. Bazinet, C , Katzen, A.L., Morgan, M., Mahowald, A.P. and Lemmon, S.K. (1993) The Drosophila clathrin heavy chain gene: clathrin function is essential in a multicellular organism. Genetics, 134, 1119-1134.
12. Liu, S.H , Wong, M.L., Craik, C.S. and Brodsky, F.M. (1995) Regulation of clathrin assembly and trimerization defined using recombinant triskelion hubs. Cell, 83, 257-267.
13. Sirotkin, H., Morrow, B., DasGupta, R., Goldberg, R., Patanjali, S.R., Shi, G., Cannizarro, L., Shprintzen, R., Weissman, S.M. and Kucherlapati, R. (1996) Isolation of a clathrin heavy chain gene with muscle-specific expession from the region commonly deleted in Velo-Cardio-Facial syndrome. Hum. Mol. Genet, 5, 617-624.
14. Uberbacher, E.C. and Mural, R.J. (1991) Locating protein-coding regions in human DNA sequences by a multiple sensor-neural networ approach. Proc. Natl Acad. Sci. USA, 88, 11261-11265
15. Collins, J.E., Cole, C.G., Smink, L.J., Garrett, C.L , Leversha, M.A., Soderlund, C.A., Maslen, G.L., Everett, L.A., Rice, K.M., Coffey, A.J., Gregory, S., Gwilliam, R., Dunham, A., Davies, A.F., Hassock, S., Todd, C.M., Peyrard, M., Xie, Y.-G., Lehrach, H., Hulsebos, T.J.M., Weissenbach, J., Morrow, B., Kucherlapati, R.S., Wadey, R., Scambler, P.J., Kim, U.-J., Simon, M.J., Carter, N.P., Durbin, R., Dumanski, J.P., Bentley, D.R. and Dunham, I. (1995) A high resolution integrated yeast artificial chromosome clone map of human chromosome 22. Nature, 377, 367-379.
16. Peyrard, M., Fransson, I., Xie, Y.-G., Han, F.-Y., Ruttledge, M.H., Swahn, S., Collins, J.E., Dunham, I., Collins, V.P. and Dumanski, J.P. (1994) Characterization of a new member of the human β-adaptin gene family from chromosome 22q12, a candidate meningioma gene. Hum. Mol. Genet., 3, 1393-1399.
17. Dumanski, J.P., Carlbom, E., Collins, V.P. and Nordenskjöld, M. (1987) Deletion mapping of a locus on human chromosome 22 involved in the oncogenesis of meningioma. Proc. Natl Acad. Sci. USA, 84, 9275-9279.
18. Ruttledge, M.H., Xie, Y.-G., Han, F.-Y., Peyrard, M., Collins, V.P., Nordenskjöld, M. and Dumanski, J.P. (1994) Deletions on chromosome 22 in sporadic meningioma. Genes, Chromosomes Cancer, 10, 122-130.
19. Delattre, O., Zuckman, J., Plougastel, B., Desmaze, C., Melot, T., Peter, M., Kovar, H., Joubert, I., de Jong, P., Rouleau, G., Aurias, A. and Thomas, G. (1992) Gene fusion with an ETS DNA-binding domain caused by chromosome translocation in human tumours. Nature, 359, 162-165.
20. Friend, S.H , Bernards, R., Rogelj, S., Weinberg, R.A., Rapaport, J.M., Alben, D.M. and Dryja, T.P. (1986) A human DNA segment with properties of the gene that predisposes to retinoblastoma and osteosarcoma. Nature, 323, 643-646.
21. Gallusser, A. and Kirchhausen, T (1993) The β1 and β2 subunits of the AP complexes are the clathrin coat assembly components. EMBO J., 12, 5237-5244.
22. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular cloning; a laboratory manual. Cold Spring Harbor, New York
23. Pan, H.-Q., Wang, Y.-P., Chissoe, S.L., Bodenteich, A., Wang, Z., Iyer, K., Clifton, S.W., Crabtree, J.S. and Roe, B.A. (1994) The complete nucleotide sequences of the SacBII Kan domain of the P1 pAD10-SacBII cloning vector and three cosmid cloning vectors: pTCF, svPHEP, and Lawrist16. GATA, 11, 181-186.
24. Staden, R. (1994) The Staden package. In Methods in molecular biology, A. M. Griffin and H. G. Griffin. Humana Press Inc: Totawa, NJ, pp. 9-170
25. Milosavljevic, A. (1996) Handbook of Genome Analysis, Repeat Analysis, Chapter 13, Section 4.