In vivo protein-DNA interactions at a human DNA replication origin

Proceedings of the National Academy of Sciences of the United States of America

Volumn 93, Issue 4, 1996, Pages 1498-1503

  Dimitrova, Daniela S ^a   Giacca, Mauro ^a   Demarchi, Francesca ^a   Biamonti, Giuseppe ^b   Riva, Silvano ^b   Falaschi, Arturo ^a  

^a INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Italy)

^b Ist Genet Biochim ed E   (Italy)

Author keywords

genomic footprinting; lamin B2; ligation mediated PCR; origin binding proteins

Indexed keywords

ARTICLE; DNA FOOTPRINTING; DNA REPLICATION; GENE ISOLATION; GENE LOCATION; GENE MAPPING; GENOME; HUMAN; HUMAN CELL; PRIORITY JOURNAL; PROTEIN DNA INTERACTION;

BASE SEQUENCE; CELL DIVISION; DNA; DNA FOOTPRINTING; DNA REPLICATION; DNA-BINDING PROTEINS; GENES; HL-60 CELLS; HUMANS; LAMIN TYPE B; LAMINS; MOLECULAR SEQUENCE DATA; NUCLEAR PROTEINS; PROTEIN BINDING; REPLICATION ORIGIN; TRANSCRIPTION, GENETIC;

EID: 0029959927     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.93.4.1498     Document Type: Article

References (43)

1. Huberman, J. A. & Riggs, A. D. (1968) J. Mol. Biol. 32, 327-341.
2. McKnight, S. L, Bustin, M. & Miller, O. J. (1977) Cold Spring Harbor Symp. Quant. Biol. 42, 741-754.
3. Bozzoni, I., Baldari, C. T., Amaldi, F. & Buongiorno-Nardelli, M. (1981) Eur. J. Biochem. 118, 585-590.
4. Diller, J. D. & Raghuraman, M. K. (1994) Trends Biochem. Sci. 19, 320-325.
5. Bell, S. P. & Stillman, B. (1992) Nature (London) 357, 128-134.
6. Diffley, J. F. & Cocker, J. H. (1992) Nature (London) 357, 169-172.
7. Rowley, A., Cocker, L. H., Harwood, J. & Diffley, J. F. X. (1995) EMBO J. 14, 2631-2641.
8. Bell, S. P., Marahrens, Y., Rao, H. & Stillman, B. (1993) Cold Spring Harbor Symp. Quant. Biol. 58, 435-442.
9. Bell, S. P., Kobayashi, R. & Stillman, B. (1993) Science 262, 1844-1849.
10. Li, J. J. & Herskowitz, I. (1993) Science 262, 1870-1874.
11. Falaschi, A. & Giacca, M. (1994) Genetica 94, 255-266.
12. Tribioli, C., Biamonti, G., Giacca, M., Colonna, M., Riva, S. & Falaschi, A. (1987) Nucleic Acids Res. 15, 10211-10232.
13. Biamonti, G., Giacca, M., Perini, G., Contreas, G., Zentilin, L., Weighardt, F., Guerra, M., Della Valle, G., Saccone, S., Riva, S. & Falaschi, A. (1992) Mol. Cell. Biol. 12, 3499-3506.
14. Biamonti, G., Perini, G., Weighardt, F., Riva, S., Giacca, M., Norio, P., Zentilin, L., Diviacco, S., Dimitrova, D. & Falaschi, A. (1992) Chromosoma 102, S24-S31.
15. Falaschi, A., Giacca, M., Zentilin, L., Norio, P., Diviacco, S., Dimitrova, D., Kumar, S., Tuteja, R., Biamonti, G., Perini, G., Weighardt, F., Brito, J. & Riva, S. (1993) Gene 135, 125-135.
16. Giacca, M., Zentilin, L., Norio, P., Diviacco, S., Dimitrova, D., Contreas, G., Biamonti, G., Perini, G., Weighardt, F., Riva, S. & Falaschi, A. (1994) Proc. Natl. Acad. Sci. USA 91, 7119-7123.
17. Falaschi, A., Biamonti, G., Cobianchi, F., Csordas Toth, E., Faulkner, G., Giacca, M., Pedacchia, D., Perini, G., Riva, S. & Tribioli, C. (1988) Biochim. Biophys. Acta 951, 430-442.
18. DePamphilis, M. L. (1993) Annu. Rev. Biochem. 62, 29-63.
19. Dutta, A. (1993) Curr. Biol. 3, 709-712.
20. Mueller, P. R. & Wold, B. (1989) Science 246, 780-786.
21. Demarchi, F., D'Agaro, P., Falaschi, A. & Giacca, M. (1993) J. Virol. 67, 7450-7460.
22. Meier, R. W., Chen, T., Mathews, S., Niklaus, G. & Tobler, A. (1992) Cell Growth Differ. 3, 663-669.
23. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab. Press, Plainview, NY), 2nd Ed.
24. Saluz, H. P. & Jost, J. P. (1987) A Laboratory Guide to Genomic Sequencing (Birkhauser, Basel).
25. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A. & Struhl, K. (1994) Current Protocols in Molecular Biology (Wiley, New York).
26. Chomczynski, P. & Sacchi, N. (1987) Anal. Biochem. 162, 156-159.
27. Wu, C. (1980) Nature (London) 286, 854-860.
28. Nedospasov, S. A. & Georgiev, G. P. (1980) Biochem. Biophys. Res. Commun. 92, 532-539.
29. Gross, D. S. & Garrard, W. T. (1988) Annu. Rev. Biochem. 57, 159-197.
30. Elgin, S. C. (1988) J. Biol. Chem. 263, 19259-19262.
31. Cheng, L. & Kelly, T. J. (1989) Cell 59, 541-551.
32. Simpson, R. T. (1990) Nature (London) 343, 387-389.
33. Ishimi, Y. (1992) J. Biol. Chem. 267, 10910-10913.
34. Li, R., Yang, L., Fouts, E. & Botchan, M. R. (1993) Cold Spring Harbor Symp. Quant. Biol. 58, 403-413.
35. Lohr, D. & Torchia, T. (1988) Biochemistry 27, 3961-3965.
36. Brown, J. A., Holmes, S. G. & Smith, M. M. (1991) Mol. Cell. Biol. 11, 5301-5311.
37. Palen, T. E. & Cech, T. R. (1984) Cell 36, 933-942.
38. Pfeifer, G. P., Steigerwald, S. D., Mueller, P. R., Wold, B. & Riggs, A. D. (1989) Science 246, 810-813.
39. Csordas-Toth, E., Marusic, L., Ochem, A., Patthy, A., Pongor, S., Giacca, M. & Falaschi, A. (1993) Nucleic Acids Res. 21, 3257-3263.
40. Briggs, M. R., Kadonaga, J. T., Bell, S. P. & Tjian, R. (1986) Science 234, 47-52.
41. Virbasius, C. A., Virbasius, J. V. & Scarpulla, R. C. (1993) Genes Dev. 7, 2431-2445.
42. Bell, S. P., Learned, R. M., Jantzen, H. M. & Tjian, R. (1988) Science 241, 1192-1197.
43. Diffley, J. F., Cocker, J. H., Dowell, S. J. & Rowley, A. (1994) Cell 78, 303-316.