Development and application of a primer set for specific detection of Bacillus thuringiensis and Bacillus cereus in soil using magnetic capture hybridization and PCR amplification

Systematic and Applied Microbiology

Volumn 19, Issue 3, 1996, Pages 436-441

  Damgaard, Per Hyldebrink ^a   Jacobsen, Carsten Suhr ^a   Sørensen, Jan ^a  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Bacillus cereus; Bacillus thuringiensis; Detection; Magnetic capture hybridization PCR; Phosphatidylinositol specific phospholipase C; Soil

Indexed keywords

PHOSPHATIDYLINOSITOL; PHOSPHOLIPASE C;

ARTICLE; BACILLUS CEREUS; BACILLUS THURINGIENSIS; BACTERIAL GENETICS; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SOIL MICROFLORA;

BACILLUS CEREUS; BACILLUS THURINGIENSIS; BACTERIA (MICROORGANISMS); NEGIBACTERIA;

EID: 0029958366     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(96)80074-9     Document Type: Article

References (27)

1. Ash, C., Farrow, J. A. E., Dorsch, M., Stackebrandt, E., Collins, M. D.: Comparative analysis of Bacillus anthracis, Bacillus cereus, and related species on the basis of reverse transcriptase sequencing of 16S rRNA. Int. J. Syst. Bacteriol. 41, 343-346 (1991)
2. Brunel, B., Perissol, C., Fernandez, M., Boeufgras, J. M., Le Petit, J.: Occurrence of Bacillus species on evergreen oak leaves. FEMS Microbiol. Lett. 14, 331-342 (1994)
3. Carlson, C. R., Gronstad, A., Kolsto, A. B.: Physical maps of the genomes of three Bacillus cereus strains. J. Bacteriol. 174, 3750-3756 (1992)
4. Carlson, C. R., Kolsto, A. B.: A complete physical map of a Bacillus thuringiensis chromosome. J. Bacteriol. 175, 1053-1060 (1993)
5. Feitelson, J. S.: The Bacillus thuringiensis family tree, pp. 63-72. In: Advanced Engineered Pesticides (L. Kim, eds.). New York, Marcel Dekker Inc. 1993
6. Gonzalez, J. M. J., Brown, B. J., Carlton, B. C.: Transfer of Bacillus thuringiensis plasmids coding for delta-endotoxin among strains of Bacillus thuringiensis and Bacillus cereus insecticidal toxin. Proc. Natl. Acd. Sci. USA. 79, 6951-6955 (1982)
7. Henderson, I., Duggleby, C. J., Turnbull, P. C. B.: Differentiation of Bacillus anthracis from other Bacillus cereus group bacteria with the PCR. Int. J. Syst. Bacteriol. 44, 99-105 (1994)
8. Holben, W. E., Schroeter, B. M., Calabrese, V. G. M., Olsen, R. H., Kukor, J. K., Biederbeck, V. O., Smith, A. E., Tiedje, J. M.: Gene probe analysis of soil microbial populations selected by amendment with 2,4-dichlorophenoxyacetic acid. Appl. Environ. Microbiol. 58, 3941-3948 (1992)
9. Jacobsen, C. S.: Microscale detection of specific bacterial DNA in soil with a magnetic capture-hybridization and PCR amplification assay. Appl. Environ. Microbiol. 61, 3347-3352 (1995)
10. Jarrett, P., Stephenson, M.: Plasmid transfer between strains of Bacillus thuringiensis infecting Galleria mellonella and Spodoptera littoralis. Appl. Environ. Microbiol. 56, 1608-1614 (1990)
11. Kuppe, A., Evans, L. M., McMillen, D. A., Griffith, O. H.: Phosphatidylinositol-specific phospholipase C of Bacillus cereus: cloning, sequencing, and relationship to other phospholipases. J. Bacteriol. 171, 6077-6083 (1989)
12. Lechner, M., Kupke, T., Stefanovic, S., Götz, F.: Molecular characterization and sequence of phosphatidylinositol-specific phospholipase C of Bacillus thuringiensis. Mol. Microbiol. 3, 621-626 (1989)
13. Maniatis, T., Fritsch, E. F., Sambrook, J.: Molecular cloning: A laboratory manual. New York, Cold Spring Harbor Laboratory Press 1982
14. Martin, P. A. W., Travers, R. S.: Worldwide abundace and distribution of Bacillus thuringiensis isolates. Appl. Environ. Microbiol. 55, 2437-2442 (1989)
15. Nakamura, L. K.: Bacillus alginolyticus sp. nov. and Bacillus chondroitinus sp. nov., two alginate-degrading species. Int. J. Syst. Bacteriol. 37, 284-286 (1987)
16. Nakamura, L. K., Jackson, M. A.: Clarification of the taxonomy of Bacillus mycoides. Int. J. Syst. Bacteriol. 45, 46-49 (1995)
17. Nishida, S., Nakagawara, G.: Isolation of toxigenic strains of Clostridium novyi from soil. J. Bacteriol. 88, 1636-1640 (1964)
18. Nybroe, O., Christoffersen, K., Rieman, B.: Survival of Bacillus licheniformis in seawater model ecosystems. Appl. Environ. Microbiol. 58, 252-259 (1992)
19. Pedersen, J. C, Jacobsen, C. S.: Fate of Enterobacter cloacae JP120 and Alcaligenes eutrophus AEO106(pRO101) in soil during water stress: effects on culturability and viability. Appl. Environ. Microbiol. 59, 1560-1564 (1993)
20. Priest, F. G.: DNA homology in the genus Bacillus, pp. 33-57. In: The aerobic endospore-forming bacteria (Berkeley, R. C. W., Goodfellow, M., eds.). London, Academic Press, 1981
21. Roszak, D. B., Colwell, R. R.: Survival strategies of bacteria in the natural environment. Microbiol. Rev. 51, 365-379 (1987)
22. Smith, L. D. S.: The genus Clostridium - Medical, pp. 1867-1878. In: The Prokaryotes (Balows, A., Starr, M. P., Stolp, H., Trüper, H. G., Schlegel, H. G., eds.). New York, Springer Verlag, 1992
23. Smith, R. A., Couche, G. A.: The phylloplane as a source of Bacillus thuringiensis variants. Appl. Environ. Microbiol. 57, 311-315 (1991)
24. Sneath, P. H.: Endospore-forming gram-positive rods and cocci, pp. 1104-1207. In: Bergey's Manual of Systematic Bacteriology (Holt, J. G., eds.). Baltimore, Williams & Wilkins 1986
25. Stackebrandt, E., Ludwig, W., Weizenegger, M., Dorn, S., McGill, T. J., Fox, G. E., Woese, C. R., Schubert, W., Schleifer, K. H.: Comparative 16S rRNA oligonucleotide analysis and murein types of round-spore-forming bacilli and nonspore-forming relatives. J. Gen. Microbiol. 133, 2523-2529 (1987)
26. Titball, R. W.: Bacterial phospholipases C. Microbiol. Rev. 57, 347-366 (1993)
27. Watanabe, K., Hayano, K.: Distribution and identification of proteolytic Bacillus spp. in paddy field soil under rice cultivation. Can. J. Microbiol. 39, 674-680 (1993)