메뉴 건너뛰기




Volumn 71, Issue 1, 1996, Pages 351-364

Kinetic modeling of exciton migration in photosynthetic systems. 3. Application of genetic algorithms to simulations of excitation dynamics in three-dimensional photosystem I core antenna/reaction center complexes

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; PHOTOSYNTHESIS; SOLAR ENERGY; SPECTROSCOPY;

EID: 0029947065     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(96)79233-0     Document Type: Article
Times cited : (35)

References (39)
  • 1
    • 0025949153 scopus 로고
    • Kinetic modelling of exciton migration in photosynthetic systems. 1. Effects of pigment heterogeneity and antenna topography on exciton kinetics and charge separation yields
    • Beauregard, M., I. Martin, and A. R. Holzwarth. 1991. Kinetic modelling of exciton migration in photosynthetic systems. 1. Effects of pigment heterogeneity and antenna topography on exciton kinetics and charge separation yields. Biochim. Biophys. Acta. 1060:271-283.
    • (1991) Biochim. Biophys. Acta , vol.1060 , pp. 271-283
    • Beauregard, M.1    Martin, I.2    Holzwarth, A.R.3
  • 2
    • 43949174111 scopus 로고
    • Direct observation of ultrafast energy transfer in PSI core antenna
    • Du, M., X. L. Xie, Y. W. Jia, L. Mets, and G. R. Fleming. 1993. Direct observation of ultrafast energy transfer in PSI core antenna. Chem. Phys. Lett. 201:535-542.
    • (1993) Chem. Phys. Lett. , vol.201 , pp. 535-542
    • Du, M.1    Xie, X.L.2    Jia, Y.W.3    Mets, L.4    Fleming, G.R.5
  • 3
    • 0002910534 scopus 로고
    • The primary steps of photosynthesis
    • Fleming, G. R., and R. van Grondelle. 1994. The primary steps of photosynthesis. Phys. Today 47:48-55.
    • (1994) Phys. Today , vol.47 , pp. 48-55
    • Fleming, G.R.1    Van Grondelle, R.2
  • 4
    • 0039722130 scopus 로고
    • Spectral dependence of the fluorescence lifetime of Rhodospirillum rubrum. Evidence for inhomogeneity of B880 absorption band
    • J. Biggins, editor. Marinus Nijhoff, Dordrecht, The Netherlands
    • Freiberg, A., V. I. Godik, and K. Timpmann. 1987. Spectral dependence of the fluorescence lifetime of Rhodospirillum rubrum. Evidence for inhomogeneity of B880 absorption band. In Progress in Photosynthesis Research, Vol I. J. Biggins, editor. Marinus Nijhoff, Dordrecht, The Netherlands. 45-48.
    • (1987) Progress in Photosynthesis Research , vol.1 , pp. 45-48
    • Freiberg, A.1    Godik, V.I.2    Timpmann, K.3
  • 7
    • 0001903624 scopus 로고
    • Genetic algorithms with sharing for multimodal function optimization
    • Genetic Algorithms and Their Applications. Morgan Kaufmann, San Mateo, CA
    • Goldberg, D. E., and J. Richardson. 1987. Genetic algorithms with sharing for multimodal function optimization. In Genetic Algorithms and Their Applications. Proceedings of the Second International Conference on Genetic Algorithms. Morgan Kaufmann, San Mateo, CA. 41-49.
    • (1987) Proceedings of the Second International Conference on Genetic Algorithms , pp. 41-49
    • Goldberg, D.E.1    Richardson, J.2
  • 9
    • 0002335710 scopus 로고
    • Picosecond fluorescence spectroscopy and energy transfer in photosynthetic antenna pigments
    • J. Barber, editor. Elsevier, Amsterdam
    • Holzwarth, A. R. 1987. Picosecond fluorescence spectroscopy and energy transfer in photosynthetic antenna pigments. In The Light Reactions, Vol. 8. Topics in Photosynthesis. J. Barber, editor. Elsevier, Amsterdam. 95-157.
    • (1987) The Light Reactions, Vol. 8. Topics in Photosynthesis , vol.8 , pp. 95-157
    • Holzwarth, A.R.1
  • 10
    • 0000076793 scopus 로고
    • Excited-state kinetics in chlorophyll systems and its relationship to the functional organization of the photosystems
    • H. Scheer, editor. CRC Press, Boca Raton
    • Holzwarth, A. R. 1991. Excited-state kinetics in chlorophyll systems and its relationship to the functional organization of the photosystems. In Chlorophylls. H. Scheer, editor. CRC Press, Boca Raton. 1125-1151.
    • (1991) Chlorophylls , pp. 1125-1151
    • Holzwarth, A.R.1
  • 11
    • 0002272436 scopus 로고    scopus 로고
    • Data analysis of time-resolved measurements
    • J. Amesz and A. Hoff, editors. Kluwer Academic, Dordrecht
    • Holzwarth, A. R. 1996. Data analysis of time-resolved measurements. In Biophysical Techniques. Advances in Photosynthesis Research. J. Amesz and A. Hoff, editors. Kluwer Academic, Dordrecht.
    • (1996) Biophysical Techniques. Advances in Photosynthesis Research
    • Holzwarth, A.R.1
  • 12
    • 0026640015 scopus 로고
    • Recent advances in the understanding of chlorophyll excited state dynamics in thylakoid membranes and isolated reaction centre complexes
    • Holzwarth, A. R., and T. A. Roelofs. 1992. Recent advances in the understanding of chlorophyll excited state dynamics in thylakoid membranes and isolated reaction centre complexes. J. Photochem. Photobiol. B. 15:45-62.
    • (1992) J. Photochem. Photobiol. B , vol.15 , pp. 45-62
    • Holzwarth, A.R.1    Roelofs, T.A.2
  • 13
    • 0027289393 scopus 로고
    • Energy transfer and charge separation kinetics in photosystem I. 1. Picosecond transient absorption and fluorescence study of cyanobacterial photosystem I particles
    • Holzwarth, A. R., G. H. Schatz, H. Brock, and E. Bittersmann. 1993. Energy transfer and charge separation kinetics in photosystem I. 1. Picosecond transient absorption and fluorescence study of cyanobacterial photosystem I particles. Biophys. J. 64:1813-1826.
    • (1993) Biophys. J. , vol.64 , pp. 1813-1826
    • Holzwarth, A.R.1    Schatz, G.H.2    Brock, H.3    Bittersmann, E.4
  • 14
    • 0026734087 scopus 로고
    • Simulations of the temperature dependence of energy transfer in the PS I core antenna
    • Jia, Y., J. M. Jean, M. M. Werst, C. Chan, and G. R. Fleming. 1992. Simulations of the temperature dependence of energy transfer in the PS I core antenna. Biophys. J. 63:259-273.
    • (1992) Biophys. J. , vol.63 , pp. 259-273
    • Jia, Y.1    Jean, J.M.2    Werst, M.M.3    Chan, C.4    Fleming, G.R.5
  • 15
    • 0028953308 scopus 로고
    • 8.5A projection map of the light-harvesting complex I from Rhodospirillum rubrum reveals a ring composed of 16 subunits
    • Karrasch, S., P. A. Bullough, and R. Ghosh. 1995. 8.5A projection map of the light-harvesting complex I from Rhodospirillum rubrum reveals a ring composed of 16 subunits. EMBO J. 14:631-638.
    • (1995) EMBO J. , vol.14 , pp. 631-638
    • Karrasch, S.1    Bullough, P.A.2    Ghosh, R.3
  • 17
    • 0025898707 scopus 로고
    • Three-dimensional structure of plant light-harvesting complex determined by electron crystallography
    • Kühlbrandt, W., and D. N. Wang. 1991. Three-dimensional structure of plant light-harvesting complex determined by electron crystallography. Nature. 350:130-134.
    • (1991) Nature , vol.350 , pp. 130-134
    • Kühlbrandt, W.1    Wang, D.N.2
  • 18
    • 0028147508 scopus 로고
    • Atomic model of plant light-harvesting complex by electron crystallography
    • Kühlbrandt, W., D. N. Wang, and Y. Fujiyoshi. 1994. Atomic model of plant light-harvesting complex by electron crystallography. Nature. 367: 614-621.
    • (1994) Nature , vol.367 , pp. 614-621
    • Kühlbrandt, W.1    Wang, D.N.2    Fujiyoshi, Y.3
  • 19
    • 0028349255 scopus 로고
    • Excited state dynamics in chlorophyll-based antennae: The role of transfer equilibrium
    • Laible, P. D., W. Zipfel, and T. G. Owens. 1994. Excited state dynamics in chlorophyll-based antennae: the role of transfer equilibrium. Biophys. J. 66:844-860.
    • (1994) Biophys. J. , vol.66 , pp. 844-860
    • Laible, P.D.1    Zipfel, W.2    Owens, T.G.3
  • 20
    • 0027958068 scopus 로고
    • Time-resolved spectroscopy of energy and electron transfer processes in the photosynthetic bacterium Heliobacillus mobilis
    • Lin, S., H.-C. Chiou, F. A. M. Kleinherenbrink, and R. E. Blankenship. 1994. Time-resolved spectroscopy of energy and electron transfer processes in the photosynthetic bacterium Heliobacillus mobilis. Biophys. J. 66:437-445.
    • (1994) Biophys. J. , vol.66 , pp. 437-445
    • Lin, S.1    Chiou, H.-C.2    Kleinherenbrink, F.A.M.3    Blankenship, R.E.4
  • 22
    • 0002470532 scopus 로고
    • A study of permutation crossover operators on the traveling salesman problem
    • Genetic Algorithms and Their Applications. Morgan Kaufmann, San Mateo, CA
    • Oliver, I. M., D. J. Smith, and J. R. C. Holland. 1987. A study of permutation crossover operators on the traveling salesman problem. In Genetic Algorithms and Their Applications. Proceedings of the Second International Conference on Genetic Algorithms. Morgan Kaufmann, San Mateo, CA. 224-230.
    • (1987) Proceedings of the Second International Conference on Genetic Algorithms , pp. 224-230
    • Oliver, I.M.1    Smith, D.J.2    Holland, J.R.C.3
  • 23
    • 0002550620 scopus 로고
    • Reaction centers
    • H. Scheer, editor. CRC Press, Boca Raton
    • Parson, W. W. 1991. Reaction centers. In Chlorophylls. H. Scheer, editor. CRC Press, Boca Raton. 1153-1180.
    • (1991) Chlorophylls , pp. 1153-1180
    • Parson, W.W.1
  • 24
    • 84989665720 scopus 로고
    • Exciton migration and trapping in photosynthesis
    • Pearlstein, R. M. 1982. Exciton migration and trapping in photosynthesis. Photochem. Photobiol. 35:835-844.
    • (1982) Photochem. Photobiol. , vol.35 , pp. 835-844
    • Pearlstein, R.M.1
  • 25
    • 0028118530 scopus 로고
    • Energy transfer in the inhomogeneously broadened core antenna of purple bacteria: A simultaneous fit of low-intensity picosecond absorption and fluorescence kinetics
    • Pullerits, T., K. J. Visscher, S. Hess, V. Sundström, A. Freiberg, K. Timpmann, and R. van Grondelle. 1994. Energy transfer in the inhomogeneously broadened core antenna of purple bacteria: a simultaneous fit of low-intensity picosecond absorption and fluorescence kinetics. Biophys. J. 66:236-248.
    • (1994) Biophys. J. , vol.66 , pp. 236-248
    • Pullerits, T.1    Visscher, K.J.2    Hess, S.3    Sundström, V.4    Freiberg, A.5    Timpmann, K.6    Van Grondelle, R.7
  • 26
    • 0016346275 scopus 로고
    • The P700-chlorophyll a-protein. Isolation and some characteristics of the complex in higher plants
    • Shiozawa, J. A., R. S. Alberte, and J. P. Thornber. 1974. The P700-chlorophyll a-protein. Isolation and some characteristics of the complex in higher plants. Arch. Biochem. Biophys. 165:388-397.
    • (1974) Arch. Biochem. Biophys. , vol.165 , pp. 388-397
    • Shiozawa, J.A.1    Alberte, R.S.2    Thornber, J.P.3
  • 28
    • 0028281486 scopus 로고
    • Energy migration and trapping in a spectrally and spatially inhomogeneous light-harvesting antenna
    • Somsen, O. J. G., F. van Mourik, R. van Grondelle, and L. Valkunas. 1994. Energy migration and trapping in a spectrally and spatially inhomogeneous light-harvesting antenna. Biophys. J. 66:1580-1596.
    • (1994) Biophys. J. , vol.66 , pp. 1580-1596
    • Somsen, O.J.G.1    Van Mourik, F.2    Van Grondelle, R.3    Valkunas, L.4
  • 29
    • 0003340389 scopus 로고
    • Dynamics of excitation energy transfer in photosynthetic bacteria
    • H. Scheer, editor. CRC Press, Boca Raton
    • Sundström, V., and R. van Grondelle. 1991. Dynamics of excitation energy transfer in photosynthetic bacteria. In Chlorophylls. H. Scheer, editor. CRC Press, Boca Raton. 1097-1124.
    • (1991) Chlorophylls , pp. 1097-1124
    • Sundström, V.1    Van Grondelle, R.2
  • 30
    • 0028140413 scopus 로고
    • Kinetic modeling of exciton migration in photosynthetic systems. 2. Simulations of excitation dynamics in two-dimensional photosystem I core antenna/reaction center complexes
    • Trinkunas, G., and A. R. Holzwarth. 1994a. Kinetic modeling of exciton migration in photosynthetic systems. 2. Simulations of excitation dynamics in two-dimensional photosystem I core antenna/reaction center complexes. Biophys. J. 66:415-429.
    • (1994) Biophys. J. , vol.66 , pp. 415-429
    • Trinkunas, G.1    Holzwarth, A.R.2
  • 31
    • 8944261746 scopus 로고
    • Modelling of energy transfer in photosystem I using genetic algorithm
    • Trinkunas, G., and A. R. Holzwarth. 1994b. Modelling of energy transfer in photosystem I using genetic algorithm. Liet. Fiz. Zurn. 34:287-292.
    • (1994) Liet. Fiz. Zurn. , vol.34 , pp. 287-292
    • Trinkunas, G.1    Holzwarth, A.R.2
  • 32
    • 0000904285 scopus 로고
    • Long-wavelength absorbing antenna pigments and heterogeneous absorption bands concentrate excitons and increase absorption cross section
    • Trissl, H.-W. 1993. Long-wavelength absorbing antenna pigments and heterogeneous absorption bands concentrate excitons and increase absorption cross section. Photosynth. Res. 35:247-263.
    • (1993) Photosynth. Res. , vol.35 , pp. 247-263
    • Trissl, H.-W.1
  • 33
    • 84984240011 scopus 로고
    • Invariable trapping times in photosystem I upon excitation of minor long-wavelength absorbing pigments
    • Abstr.
    • Trissl, H.-W., B. Hecks, and K. Wulf. 1993. Invariable trapping times in photosystem I upon excitation of minor long-wavelength absorbing pigments. Photochem. Photobiol. 57:108-112. (Abstr.)
    • (1993) Photochem. Photobiol. , vol.57 , pp. 108-112
    • Trissl, H.-W.1    Hecks, B.2    Wulf, K.3
  • 35
    • 0029139611 scopus 로고
    • Description of energy migration on photosystem I by a model with two distance scaling parameters
    • Valkunas, L., V. Liuolia, J. P. Dekker, and R. van Grondelle. 1995. Description of energy migration on photosystem I by a model with two distance scaling parameters. Photosynth. Res. 43:149-154.
    • (1995) Photosynth. Res. , vol.43 , pp. 149-154
    • Valkunas, L.1    Liuolia, V.2    Dekker, J.P.3    Van Grondelle, R.4
  • 36
    • 0000509737 scopus 로고
    • Energy transfer in the B800-850 antenna complex of purple bacteria Rhodobacter sphaeroides: A study by spectral hole-burning
    • van der Laan, H., T. Schmidt, R. W. Visschers, K. J. Visscher, R. van Grondelle, and S. Völker. 1990. Energy transfer in the B800-850 antenna complex of purple bacteria Rhodobacter sphaeroides: a study by spectral hole-burning. Chem. Phys. Lett. 170:231-238.
    • (1990) Chem. Phys. Lett. , vol.170 , pp. 231-238
    • Van Der Laan, H.1    Schmidt, T.2    Visschers, R.W.3    Visscher, K.J.4    Van Grondelle, R.5    Völker, S.6
  • 39
    • 0002278835 scopus 로고
    • First passage time problems in chemical physics
    • Weiss, G. H. 1967. First passage time problems in chemical physics. Adv. Chem. Phys. 13:1-18.
    • (1967) Adv. Chem. Phys. , vol.13 , pp. 1-18
    • Weiss, G.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.