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Volumn 33, Issue 2, 1996, Pages 301-304

GenomeInspector: Basic software tools for analysis of spatial correlations between genomic structures within megabase sequences

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; DATA BASE; DNA SEQUENCE; GENE SEQUENCE; GENE STRUCTURE; GENETIC ORGANIZATION; MULTIGENE FAMILY; OPEN READING FRAME; PRIORITY JOURNAL; PROMOTER REGION; SEQUENCE ANALYSIS;

EID: 0029940589     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.0197     Document Type: Article
Times cited : (25)

References (13)
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    • Cardon, L.R.1    Stormo, G.D.2
  • 2
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    • Compilation of sequence-specific DNA-binding proteins implicated in transcriptional control in fungi
    • Dhawale, S. S., and Lane, A. C. (1993). Compilation of sequence-specific DNA-binding proteins implicated in transcriptional control in fungi. Nucleic Acids Res. 21: 5537-5546.
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    • Dhawale, S.S.1    Lane, A.C.2
  • 3
    • 0027944162 scopus 로고
    • Gene structure prediction by linguistic methods
    • Dong, S., and Searls, D. B. (1994). Gene structure prediction by linguistic methods. Genomics 23: 540-551.
    • (1994) Genomics , vol.23 , pp. 540-551
    • Dong, S.1    Searls, D.B.2
  • 4
    • 0027286405 scopus 로고
    • Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids
    • Frech, K., Herrmann, G., and Werner, T. (1993). Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids. Nucleic Acids Res. 21:1655-1664.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 1655-1664
    • Frech, K.1    Herrmann, G.2    Werner, T.3
  • 5
    • 0021924399 scopus 로고
    • Specific DNA binding of GAL4, a positive regulatory protein of yeast
    • Gininger, E., Varnum, S. M., and Ptashne, M. (1985). Specific DNA binding of GAL4, a positive regulatory protein of yeast. Cell 40: 767-774.
    • (1985) Cell , vol.40 , pp. 767-774
    • Gininger, E.1    Varnum, S.M.2    Ptashne, M.3
  • 6
    • 0025372992 scopus 로고
    • Identification of consensus patterns in unaligned DNA sequences known to be functionally related
    • Hertz, G. H., Hartzell, G. W., and Stormo, G. D. (1990). Identification of consensus patterns in unaligned DNA sequences known to be functionally related. Comput. Appl. Biosci. 6: 81-92.
    • (1990) Comput. Appl. Biosci. , vol.6 , pp. 81-92
    • Hertz, G.H.1    Hartzell, G.W.2    Stormo, G.D.3
  • 9
    • 0029038960 scopus 로고
    • Predicting pol II promoter sequences using transcription factor binding sites
    • Prestridge, D. S. (1995). Predicting pol II promoter sequences using transcription factor binding sites. J. Mol. Biol. 249: 923-932.
    • (1995) J. Mol. Biol. , vol.249 , pp. 923-932
    • Prestridge, D.S.1
  • 10
    • 84959757125 scopus 로고
    • SIGNAL SCAN 3.0-new database and program features
    • Prestridge, D. S., and Stormo, G. (1993). SIGNAL SCAN 3.0-New database and program features. Comput. Appl. Biosci. 9: 113-115.
    • (1993) Comput. Appl. Biosci. , vol.9 , pp. 113-115
    • Prestridge, D.S.1    Stormo, G.2
  • 11
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    • MatInd and MatInspector - New fast and versatile tools for detection of consensus matches in nucleotide sequence data
    • Quandt, K., Frech, K., Karas, H., Wingender, E., and Werner, T. (1995). MatInd and MatInspector - New fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res. 23: 4878-4884.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4878-4884
    • Quandt, K.1    Frech, K.2    Karas, H.3    Wingender, E.4    Werner, T.5
  • 12
    • 0027396508 scopus 로고
    • Concerted action of the transcriptional activators REB1, RAP1, and GCR1 in the high-level expression of the glycolytic gene TPI
    • Scott, E. W., and Baker, H. V. (1993). Concerted action of the transcriptional activators REB1, RAP1, and GCR1 in the high-level expression of the glycolytic gene TPI. Mol. Cell. Biol. 13: 543-550.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 543-550
    • Scott, E.W.1    Baker, H.V.2
  • 13
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    • A complex regulatory element from the yeast gene ENO2 modulates GCR1-dependent transcriptional activation
    • Willet, C. E., Gelfman, C. M., and Holland, M. J. (1993). A complex regulatory element from the yeast gene ENO2 modulates GCR1-dependent transcriptional activation. Mol. Cell. Biol. 13: 2623-2633.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 2623-2633
    • Willet, C.E.1    Gelfman, C.M.2    Holland, M.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.