Ab initio investigation of the molecular structure of methyl methoxymethyl phosphonate, a promising nuclease-resistant alternative of the phosphodiester linkage

Journal of Biomolecular Structure and Dynamics

Volumn 13, Issue 4, 1996, Pages 687-694

  Štrajbl, Marek ^a   Florián, Jan ^b  

^a CHARLES UNIVERSITY   (Czech Republic)

^b UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONFORMATIONAL TRANSITION; DNA CONFORMATION; DNA HELIX; DNA STRUCTURE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN STRUCTURE;

EID: 0029939897     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.1996.10508881     Document Type: Article

References (26)

1. Uhlman, E., and Peyman, A., 1990. Chem. Rev., 90:544 A. Demesmaeker, R. Haner, P. Martin, H. E. Moser, Acc. Chem. Res. 28, 366 (1995)
2. Cohen, J. S., 1991. Antiviral Res., 16:121
3. Crooke, T. S., 1992. Annu. Rev. Pharmacol. Toxicol., 32:329
4. Degols, G., Leonetti, J.-P., Milhaud, P., Mechti, N., and Lebleu, B., 1992. Antiviral Res., 17:279
5. Heinemann, U., Rudolph, L.-F., Alings, C., Morr, M., Heikens, W., Frank, R., and Blocker, H., 1992. Nucleic Acid Res., 19:427 A. Demesmaeker, K. H. Altmann, A. Waldner, S. Wendeborn, Current Opinion Struct. Biol. 5, 343 (1995)
6. Veal, J. M., and Brown, F. K., 1995. J. Am. Chem. Soc., 117:1873
7. Goodchild, J., 1990. Bioconjugate Chem., 11:165
8. Rosenberg, I., and Holy, A., 1987. Collection Czech. Chem. Commun., 52:2572
9. Rosenberg, I., and Holy, A., 1985. Collection Czech. Chem. Commun., 50:1507
10. Liang, C., Stouch, T. R., and Hagler, A. T., 1993. J. Am. Chem. Soc., 115:1537
11. Landin, J., and Pascher, I., 1995. J. Phys. Chem., 99:4471
12. Alagona, G., Ghio, C., and Kollman, P., 1983. J. Am. Chem. Soc., 105:5226
13. Alagona, G., Ghio, C., and Kollman, P., 1985. J. Am. Chem. Soc., 107:2229
14. Jayaram, B., Mezei, M., and Beveridge, D. L., 1987. J. Comput. Chem., 8:917
15. Jayaram, B., Mezei, M., and Beveridge, D. L., 1988. J. Am. Chem. Soc., 110:1691
16. Jayaram, B., Ravishanker, G., and Beveridge, D. L., 1988. J. Phys. Chem., 92:1032
17. Florián, J., Baumruk, V., Strajbl, M., Bednárová, L., and Stepanek, J., J. Phys. Chem., in press
18. Frisch, M. J., Trucks, G. W., Head-Gordon, M., Gill, P. M. W., Wong, M. W., Foresman, J. B., Johnson, B. G., Schlegel, H. B., Robb, M. A., Replogle, E. S., Gomperts, R., Andres, J. L., Raghavachari, K., Binkley, J. S., Gonzalez, C., Martin, R. L., Fox, D. J., Defrees, D. J., Baker, J., Stewart, J. J. P., and Pople, J. A., 1992. Gaussian 92, Revision G. Vol. 4, Pittsburgh PA:Gaussian Inc.
19. Berman, M. H., Olson, W. K., Beveridge, D. L., Westbrook, J., Gelbin, A., Demeny, T., Hsich, S.-H., Svinivasan, A. R., and Schneider, B., 1992. Biophys. J., 63:751 Structures from Nucleic Acid Database, Rutgers University
20. Hunter, W. N., Langlois D'Estaint, B., and Kennard, O., 1989. Biochemistry, 28:2444
21. Courseille, C., Dautant, A., Hospital, M., Langlois D'Estaint, B., Precigoux, G., Molko, D., and Teoule, R., 1990. Acta Crystallogr., A46:9
22. Leonard, A. L., and Hunter, N. W., 1993. J. Mol. Biol., 234:198
23. Besler, B. H., Merz, K. M., Jr and Kollman, P. A., 1990. J. Comp. Chem., 11:431
24. Singh, U. C., and Kollman, P. A., 1984. J. Comp. Chem., 5:129
25. Saenger, W., 1984. Principles of Nucleic Acid Structure New York:Springer Verlag.
26. Cisařová, I., Zachová, J., Rosenberg, I., and Točcik, Z., Nucleosides and Nucleotides submitted