Regulatory factors acting at the bacteriophage Mu middle promoter

Journal of Bacteriology

Volumn 178, Issue 6, 1996, Pages 1585-1592

  Kahmeyer Gabbe, Michelle ^a   Howe, Martha M ^a  

^a UNIVERSITY OF TENNESSEE HEALTH SCIENCE CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GALACTOSIDASE; DEOXYRIBONUCLEASE I;

ARTICLE; BACTERIOPHAGE MU; BINDING SITE; CONTROLLED STUDY; DNA BINDING; DNA FOOTPRINTING; DNA REPLICATION; LYSOGENIZATION; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; REPRESSOR GENE; TRANSCRIPTION REGULATION;

EID: 0029939158     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.178.6.1585-1592.1996     Document Type: Article

References (46)

1. Alazard, R., M. Betermier, and M. Chandler. 1992. Escherichia coli integration host factor stabilizes bacteriophage Mu repressor interactions with operator DNA in vitro. Mol. Microbiol 6:1707-1714.
2. Artsimovitch, I. Personal communication.
3. m identifies a new region required for promoter function. Nucleic Acids Res. 24:450-457.
4. Bagdasarian, M., R. Lurz, B. Ruckert, F. C. H. Franklin, M. M. Bagdasarian, J. Frey, and K. N. Timmis. 1981. Specific-purpose plasmid cloning vectors. II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16:237-247.
5. Bautista, L. K. 1992. Master's thesis University of Tennessee, Memphis.
6. Bukhari, A. I., and L. Ambrosio. 1978. The invertible segment of bacteriophage Mu DNA determines the adsorption properties of Mu particles. Nature (London) 271:575-577.
7. Busby, S., and R. H. Ebright. 1994. Promoter structure, promoter recognition, and transcription activation in prokaryotes. Cell 79:743-746.
8. Chiang, L., and M. M. Howe. 1993. Mutational analysis of a C-dependent late promoter of bacteriophage Mu. Genetics 135:619-629.
9. Craigie, R., M. Mizuuchi, and K. Mizuuchi. 1984. Site-specific recognition of the bacteriophage Mu ends by the Mu A protein. Cell 39:387-394.
10. Dolz, R. 1994 GCG: database searching. Methods Mol. Biol. 24:101-116.
11. Erlich, H. A. 1989. PCR technology. Principles and applications for DNA amplification Stockton Press, New York.
12. Galas, D. J., and A. Schmitz. 1978. DNAse footprinting: a simple method for the detection of protein-DNA binding specificity. Nucleic Acids Res. 5:3157-3170.
13. Goodrich, J. A., M. L. Schwartz, and R. McClure. 1990. Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF). Nucleic Acids Res. 18:4993-5000.
14. Goosen, N., and P. van de Putte. 1984. Regulation of Mu transposition. I. Localization of the presumed recognition sites for HimD and Ner functions controlling bacteriophage Mu transcription. Gene 30:41-46.
15. Grundy, F. J., and M. M. Howe. 1984. Involvement of the invertible G segment in bacteriophage Mu tail fiber biosynthesis Virology 134:296-317.
16. Howe, M. M. 1973 Prophage deletion mapping of bacteriophage Mu-1. Virology 54:93-101
17. Howe, M. M. 1987. Late genes, particle morphogenesis, and DNA packaging, p. 63-74. In N. Symonds, A. Toussaint, P. van de Putte, and M. M. Howe (ed.), Phage Mu. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
18. Krause, H. M., and N. P. Higgins. 1984. On the Mu repressor and early DNA intermediates of transposition. Cold Spring Harbor Symp. Quant. Biol. 49: 827-834.
19. Krause, H. M., and N. P. Higgins. 1986. Positive and negative regulation of the Mu operator by Mu repressor and E coli integration host factor. J Biol. Chem 261:3744-3752.
20. Krause, H. M., M. R. Rothwell, and N. P. Higgins. 1983. The early promoter of bacteriophage Mu: definition of the site of transcript initiation. Nucleic Acids Res. 11:5483-5495.
21. Margolin, W., G. Rao, and M. M. Howe. 1989. Bacteriophage Mu late promoters: four late transcripts initiate near a conserved sequence. J. Bacteriol. 171:2003-2018.
22. Marrs, C. F., and M. M. Howe. 1950. Kinetics and regulation of transcription of bacteriophage Mu. Virology 174:192-203.
23. Martien, A., M. Groenen, and P. van de Putte. 1986. Analysis of the ends of bacteriophage Mu using site-directed mutagenesis. J. Mol. Biol. 189:597-602.
24. Mathee, K., and M. M. Howe. 1990. Identification of a positive regulator of the Mu middle operon. J. Bacteriol. 172:6641-6650.
25. 70 to activate the Mu middle promoter. J. Bacteriol. 175:5314-5323.
26. Matteucci, M. D., and M. H. Caruthers. 1981. Synthesis of deoxynucleotides on a polymer support. J. Am. Chem. Soc 103:3185-3191.
27. Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
28. Paolozzi, L., and N. Symonds. 1987. The SE region, p. 53-62. In N. Symonds, A. Toussaint, P van de Putte, and M. M. Howe (ed.), Phage Mu. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
29. Pato, M. L. 1989 Bacteriophage Mu, p. 23-52. In D. E. Berg and M. M. Howe (ed.), Mobile DNA. American Society for Microbiology, Washington, D C.
30. Priess, H., B. Brauer, C. Schmidt, and D. Kamp. 1987. Sequence of the left end of Mu, p. 277-296. In N Symonds, A. Toussaint, P. van de Putte, and M. M. Howe (ed.), Phage Mu. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y
31. Rose, R. E. 1988. The nucleotide sequence of pACYC177. Nucleic Acids Res. 16:356.
32. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
33. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
34. Scholz, P., V. Haring, B. Wittmann-Liebold, K. Ashman, M. Bagdasarian, and E. Scherzinger. 1989. Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. Gene 75:271-288.
35. Schweizer, H., and W. Boos. 1983. Cloning and characterization of the ugp-region containing the structural genes for the pho-regulon dependent sn-glycerol-3-phosphate transport system of Escherichia coli. Mol. Gen. Genet. 192:177-186.
36. Simons, R. W., F. Houman, and N. Kleckner. 1987. Improved single and multi-copy lac-based cloning vectors for protein and operon fusions Gene 53:85-96.
37. Stoddard, S. F., and M. M. Howe. 1987. DNA sequence within the Mu C operon. Nucleic Acids Res 15:7198.
38. Stoddard, S. F., and M. M. Howe. 1989. Localization and regulation of bacteriophage Mu promoters. J. Bacteriol. 171:3440-3448.
39. Stoddard, S. F., and M. M. Howe. 1990. Characterization of the C operon transcript of bacteriophage Mu. J. Bacteriol. 172:361-371.
40. Studier, F. W., A. H. Rosenberg, J. J. Dunn, and J. W. Dobendorff. 1990 Use of T7 RNA polymerase to direct expression of cloned genes. Methods Enzymol. 185:60-89.
41. Symonds, N., A. Toussaint, P. van de Putte, and M. M. Howe (ed.), 1987. Phage Mu. Cold Spring Harbor Laboratory, Cold Spring Harbor, N Y.
42. Tabor, S. 1990. Expression using the T7 RNA polymerase/promoter system, p. 16.2.1-16.2.11. In F. M. Ausubel, R. Brent, R. E. Kingston, D D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.), Current protocols in molecular biology. Green Publishing, New York.
43. van Meeteren, R., M. Giphart-Gassler, and P. van de Putte. 1980. Transcription of bacteriophage Mu II. Transcription of the repressor gene. Mol. Gen. Genet. 179:185-189.
44. Vogel, J. L., Z. J. Li, M. M. Howe, A. Toussaint, and N. P. Higgins. 1991. Temperature-sensitive mutations in the bacteriophage Mu c repressor locate a 63-amino-acid DNA-binding domain. J. Bacteriol. 173:6568-6577.
45. Wijffelman, C., M. Gassler, W. F. Stevens, and P. van de Putte. 1974 On the control of transcription of bacteriophage Mu Mol. Gen. Genet 131:85-96.
46. Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains, nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.