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Volumn 178, Issue 2, 1996, Pages 205-217

Study of correlations in DNA sequences

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0029933183     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1006/jtbi.1996.0017     Document Type: Article
Times cited : (22)

References (39)
  • 2
    • 0021109593 scopus 로고
    • A markov analysis of DNA sequences
    • ALMAGOR, H. (1983). A Markov analysis of DNA sequences. J. theor. Biol. 104, 633-645.
    • (1983) J. Theor. Biol. , vol.104 , pp. 633-645
    • Almagor, H.1
  • 4
    • 0025239561 scopus 로고
    • Periodicities in coding and non-coding regions of the genes
    • ARQUES, D. G. & MICHEL, C. J. (1990). Periodicities in coding and non-coding regions of the genes. J. theor. Biol. 143, 307-318.
    • (1990) J. Theor. Biol. , vol.143 , pp. 307-318
    • Arques, D.G.1    Michel, C.J.2
  • 7
    • 0021603982 scopus 로고
    • Markov chain analysis finds a significant influence neighboring bases in the occurence of a base in eucaryotic nuclear DNA sequences both protein-coding and noncoding
    • BLEISDELL, B. E. (1985). Markov chain analysis finds a significant influence neighboring bases in the occurence of a base in eucaryotic nuclear DNA sequences both protein-coding and noncoding. J. molec. Evol. 21, 278-288.
    • (1985) J. Molec. Evol. , vol.21 , pp. 278-288
    • Bleisdell B., E.1
  • 8
    • 0022757813 scopus 로고
    • Linguistics of nucleotide sequences: Morphology and comparison of vocabularies
    • BRENDEL, V., BECKMANN, J. S. & TRIFONOV, E. N. (1986). Linguistics of nucleotide sequences: morphology and comparison of vocabularies. J. biomol. Struct. Dyn. 4, 11-21.
    • (1986) J. Biomol. Struct. Dyn. , vol.4 , pp. 11-21
    • Brendel, V.1    Beckmann, J.S.2    Trifonov, E.N.3
  • 10
    • 0028072029 scopus 로고
    • Three-quasiperiodicity, mutual correlations, ordering and long-range modulations in genomic nucleotide sequences for viruses
    • CHECHETKIN, V. R., KNIZHNIKOVA, L. A. & TURYGIN, A. Y. (1994). Three-quasiperiodicity, mutual correlations, ordering and long-range modulations in genomic nucleotide sequences for viruses. J. biomol. Struct. Dyn. 12, 271-299.
    • (1994) J. Biomol. Struct. Dyn. , vol.12 , pp. 271-299
    • Chechetkin, V.R.1    Knizhnikova, L.A.2    Turygin, A.Y.3
  • 11
    • 21344486283 scopus 로고
    • On the spectral criteria of disorder in non-periodic sequences: Application to inflation models, symbolic dynamics and DNA sequences
    • CHECHETKIN, V. R. & TURYGIN, A. Y. (1994). On the spectral criteria of disorder in non-periodic sequences: application to inflation models, symbolic dynamics and DNA sequences. J. Phys. A: Math. Gen. 27, 4875-4898.
    • (1994) J. Phys. A: Math. Gen. , vol.27 , pp. 4875-4898
    • Chechetkin, V.R.1    Turygin, A.Y.2
  • 12
    • 0001913645 scopus 로고
    • Size-dependence of three-periodicity and long-range correlations in DNA sequences
    • CHECHETKIN, V. R. & TURYGIN, A. Y. (1995a). Size-dependence of three-periodicity and long-range correlations in DNA sequences. Phys. Lett. A 199, 75-80.
    • (1995) Phys. Lett. A , vol.199 , pp. 75-80
    • Chechetkin, V.R.1    Turygin, A.Y.2
  • 13
    • 0029098929 scopus 로고
    • Search of hidden periodicities in DNA sequences
    • CHECHETKIN, V. R. & TURYGIN, A. Y. (1995b). Search of hidden periodicities in DNA sequences. J. theor. Biol. 175, 477-494.
    • (1995) J. Theor. Biol. , vol.175 , pp. 477-494
    • Chechetkin, V.R.1    Turygin, A.Y.2
  • 14
    • 0024694872 scopus 로고
    • Spectral analysis of nucleotide sequences
    • in Russian
    • DEEV, A. A., EDINTSOV, I. M., IVANITSKY, G. R. & KUNISKY, A. S. (1989). Spectral analysis of nucleotide sequences. Biofizika 34, 564-569 (in Russian).
    • (1989) Biofizika , vol.34 , pp. 564-569
    • Deev, A.A.1    Edintsov, I.M.2    Ivanitsky, G.R.3    Kunisky, A.S.4
  • 17
    • 0027458843 scopus 로고
    • Patchiness and correlations in dna sequences
    • KARLIN, S. & BRENDEL, V. (1993). Patchiness and correlations in DNA sequences. Science 259, 677-680.
    • (1993) Science , vol.259 , pp. 677-680
    • Karlin, S.1    Brendel, V.2
  • 18
    • 84956088098 scopus 로고
    • α spectrum in a noncoding DNA sequence
    • α spectrum in a noncoding DNA sequence. Europhys. Lett. 17, 655-660.
    • (1992) Europhys. Lett. , vol.17 , pp. 655-660
    • Li, W.1    Kaneko, K.2
  • 19
    • 0026495650 scopus 로고
    • Correlations between the coding and non-coding regions in DNA
    • MANI, G. A. (1992a). Correlations between the coding and non-coding regions in DNA. J. theor. Biol. 158, 429-445.
    • (1992) J. Theor. Biol. , vol.158 , pp. 429-445
    • Mani, G.A.1
  • 20
    • 0026492782 scopus 로고
    • Long-range doublet correlations in DNA and the coding regions
    • MANI, G. A. (1992b). Long-range doublet correlations in DNA and the coding regions. J. theor. Biol. 158, 447-464.
    • (1992) J. Theor. Biol. , vol.158 , pp. 447-464
    • Mani, G.A.1
  • 21
    • 0017136639 scopus 로고
    • The 14-fold periodicity in α-tropomyosin and the interaction with actin
    • MCLACHLAN, A. D. & STEWART, M. (1976). The 14-fold periodicity in α-tropomyosin and the interaction with actin. J. mol. Biol. 103, 271-298.
    • (1976) J. Mol. Biol. , vol.103 , pp. 271-298
    • McLachlan, A.D.1    Stewart, M.2
  • 22
    • 0026692128 scopus 로고
    • Uncorrelated DNA walks
    • NEE, S. (1992). Uncorrelated DNA walks. Nature, Lond. 357, 450.
    • (1992) Nature, Lond. , vol.357 , pp. 450
    • Nee, S.1
  • 23
    • 0023248465 scopus 로고
    • Theoretical molecular biology: Prospectives and perspectives
    • NUSSINOV, R. (1987). Theoretical molecular biology: prospectives and perspectives. J. theor. Biol. 125, 219-235.
    • (1987) J. Theor. Biol. , vol.125 , pp. 219-235
    • Nussinov, R.1
  • 26
    • 0023664154 scopus 로고
    • Mono-through hexanucleotide composition of the E. coli genome: A Markov chain analysis
    • PHILLIPS, G. J., ARNOLD, J. & IVARIE, R. (1987a). Mono-through hexanucleotide composition of the E. coli genome: a Markov chain analysis. Nucl. Acids Res. 15, 2611-2626.
    • (1987) Nucl. Acids Res. , vol.15 , pp. 2611-2626
    • Phillips, G.J.1    Arnold, J.2    Ivarie, R.3
  • 27
    • 0023664163 scopus 로고
    • The effect of codon usage on the oligonucleotide composition of the E. coli genome and identification of over- and under-represented sequences by Markov chain analysis
    • PHILLIPS, G. J., ARNOLD, J. & IVARIE, R. (1987b). The effect of codon usage on the oligonucleotide composition of the E. coli genome and identification of over- and under-represented sequences by Markov chain analysis. Nucl. Acids Res. 15, 2627-2638.
    • (1987) Nucl. Acids Res. , vol.15 , pp. 2627-2638
    • Phillips, G.J.1    Arnold, J.2    Ivarie, R.3
  • 28
    • 0026480882 scopus 로고
    • Correlations in intronless DNA
    • PRABHU, V. V. & CLAVERIE, J.-M. (1992). Correlations in intronless DNA. Nature 359, 782.
    • (1992) Nature , vol.359 , pp. 782
    • Prabhu, V.V.1    Claverie, J.-M.2
  • 30
    • 0023043752 scopus 로고
    • A measure of DNA periodicity
    • SILVERMAN, B. D. & LINSKER, R. (1986). A measure of DNA periodicity. J. theor. Biol. 118, 295-300.
    • (1986) J. Theor. Biol. , vol.118 , pp. 295-300
    • Silverman, B.D.1    Linsker, R.2
  • 31
    • 0007543818 scopus 로고
    • Identifying coding sequence
    • (Bishop, B. J. & Rawlings, C. J., eds.). Oxford: IRL Press
    • STORMO, G. D. (1987). Identifying coding sequence. In: Nucleic Acid and Protein Sequence Analysis. A Practical Approach (Bishop, B. J. & Rawlings, C. J., eds.). Oxford: IRL Press, pp. 231-258.
    • (1987) Nucleic Acid and Protein Sequence Analysis. A Practical Approach , pp. 231-258
    • Stormo, G.D.1
  • 33
    • 0003304127 scopus 로고
    • Some statistical aspects of the primary structure of nucleotide sequences
    • (Waterman, M. S., ed). Boca Raton, Fla.: CRC Press
    • TAVARE, S. & GIDDINGS, B. W. (1989). Some statistical aspects of the primary structure of nucleotide sequences. In: Mathematical Methods for DNA Sequences (Waterman, M. S., ed). Boca Raton, Fla.: CRC Press, pp. 116-132.
    • (1989) Mathematical Methods for DNA Sequences , pp. 116-132
    • Tavare, S.1    Giddings, B.W.2
  • 34
    • 0024584990 scopus 로고
    • Codon preference and primary sequence structure in protein-coding regions
    • TAVARE, S. & SONG, B. (1989). Codon preference and primary sequence structure in protein-coding regions. Bull. math. Biol. 51, 95-115.
    • (1989) Bull. Math. Biol. , vol.51 , pp. 95-115
    • Tavare, S.1    Song, B.2
  • 35
    • 0001415964 scopus 로고
    • The pitch of chromatin DNA is reflected in its sequence
    • TRIFONOV, E. N. & SUSSMAN, J. L. (1980). The pitch of chromatin DNA is reflected in its sequence. Proc. natl. Acad. Sci. USA 77, 3816-3820.
    • (1980) Proc. Natl. Acad. Sci. USA , vol.77 , pp. 3816-3820
    • Trifonov, E.N.1    Sussman, J.L.2
  • 36
    • 0343727707 scopus 로고
    • Criteria for disorder in aperiodic sequences
    • TURYGIN, A. Y. & CHECHETKIN, V. R. (1994). Criteria for disorder in aperiodic sequences. Zhur. eksp. teor. Fiz. 106, 335-354 (English translation: JETP 79, 186-196).
    • (1994) Zhur. Eksp. Teor. Fiz. , vol.106 , pp. 335-354
    • Turygin, A.Y.1    Chechetkin, V.R.2
  • 37
    • 85030188501 scopus 로고    scopus 로고
    • TURYGIN, A. Y. & CHECHETKIN, V. R. (1994). Criteria for disorder in aperiodic sequences. Zhur. eksp. teor. Fiz. 106, 335-354 (English translation: JETP 79, 186-196).
    • JETP , vol.79 , pp. 186-196
  • 39
    • 0000204878 scopus 로고
    • Evolution of long-range fractal correlations and 1/f noise in DNA base sequences
    • VOSS, R. F. (1992). Evolution of long-range fractal correlations and 1/f noise in DNA base sequences. Phys. Rev. Lett. 68, 3805-3808.
    • (1992) Phys. Rev. Lett. , vol.68 , pp. 3805-3808
    • Voss, R.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.