MD Display: An interactive graphics program for visualization of molecular dynamics trajectories

Journal of Molecular Graphics

Volumn 14, Issue 1, 1996, Pages 39-41

  Callahan, Timothy J ^a   Swanson, Eric ^b   Lybrand, Terry P ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b University of Washington   (United States)

Author keywords

Molecular dynamics animation; Molecular graphics

Indexed keywords

ARTICLE; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; COMPUTER SYSTEM; MOLECULAR DYNAMICS; PRIORITY JOURNAL;

EID: 0029930881     PISSN: 02637855     EISSN: None     Source Type: Journal    
DOI: 10.1016/0263-7855(95)00088-7     Document Type: Article

References (9)

1. Pearlman, D.A., Case, D.A., Caldwell, J.C., Seibel, G.L., Singh, U.C., Weiner, P., and Kollmann, P.A. AMBER 4.0. University of California at San Francisco, San Francisco, California, 1991
2. Brooks, B.R., Bruccoleri, R.E., Olafson, B.D., States, D.J., Swaminathan, S., and Karplus, M. CHARMM: A program for macromolecular energy minimization and dynamics calculations. J. Comput. Chem. 1983, 4, 187-217
3. Discover User Guide, version 2.9/3.1. Biosym Technologies, San Diego, California, 1993
4. van Gunsteren, W.F., and Berendsen, H.J.C. GROMOS; GROningen MOlecular Simulation Computer Package. BIOMOS, Biomolecular Software, Laboratory of Physical Chemistry, University of Groningen, Nijenborgh, The Netherlands, 1988
5. Ferrin, T., Huang, C., Jarvis, L.E., and Langridge, R. The Midas display system. J. Mol. Graphics 1988, 6, 13-27
6. Bernstein, F.C., Koetzle, T.F., Williams, G.J.B., Meyer, E.F. Jr., Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T., and Tasumi, M. The Protein Data Bank: A computer-based archival file for macromolecular structures. J. Mol. Biol 1977, 112, 535-542
7. Connolly, M.L. Solvent-accessible surfaces of proteins and nucleic acids. Science 1983, 221, 709-713
8. Oppenheim, A.V., and Schafer, R.W. Discrete-Time Signal Processing. Prentice Hall, Englewood Cliffs, New Jersey, 1989, Ch. 7, pp. 444-452
9. QCPE Bull 12 (4), 70, November 1992. Quantum Chemistry Program Exchange, Indiana University. Program #623 is MD Display version 1.0. This will soon be updated to version 2.0